Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186475190

Identifier: 186475190

GI number: 186475190

Start: 481314

End: 481703

Strand: Direct

Name: 186475190

Synonym: Bphy_0421

Alternate gene names: NA

Gene position: 481314-481703 (Clockwise)

Preceding gene: 186475186

Following gene: 186475193

Centisome position: 13.83

GC content: 66.15

Gene sequence:

>390_bases
ATGCGTAGACTCCGGATGGCGGGCGCGGCGGCGTTCGCGGTCGCGACGACGCTGACGGGATGCGTCAGCACGCCGAGCCT
GAACGGAACGATGGGCGCGCCGTCGTTTCCGGATTTGCAGGCCATGTGCGGCAGCCAGCCCGCCGATTACGGCAGCGATG
CCCAATCCGTCTATGTGACGCTGTTCGACGCGTATGTCGCGAGCAAGCGCGGCGGGCTGTCGAAAGCGGATTACTGCGCT
TTCCAGACGGCGCTGGCGCAGCGATATGCGGCGCAAGGCACGAGTACCGATCCGGAGTTGCGCCGTCAGTGGGTGGAGTT
CTTCAACGCGCAGCGTGTGAAGGCGATGAGCTGGCGTGCGGCAGTCGATCCGACGCTGCGAGCAGGCTGA

Upstream 100 bases:

>100_bases
TGCGCGATTTCGCAAGTGCTGGTACCGTGCTGGCGCGAATGCGGCGCTCAGCCGATACTTCCTGCAAGCAGCCGGCTTGC
GGCGATACGAGGTGAATTCC

Downstream 100 bases:

>100_bases
GCGCCTGATTCGAATGCACGGGCGCGCACGCACACGCGCCATTCAGCCGCGGTGCGCCAGGCGTGAAAACATAAAGACGG
TCAGGCGGGCAGTTCCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRRLRMAGAAAFAVATTLTGCVSTPSLNGTMGAPSFPDLQAMCGSQPADYGSDAQSVYVTLFDAYVASKRGGLSKADYCA
FQTALAQRYAAQGTSTDPELRRQWVEFFNAQRVKAMSWRAAVDPTLRAG

Sequences:

>Translated_129_residues
MRRLRMAGAAAFAVATTLTGCVSTPSLNGTMGAPSFPDLQAMCGSQPADYGSDAQSVYVTLFDAYVASKRGGLSKADYCA
FQTALAQRYAAQGTSTDPELRRQWVEFFNAQRVKAMSWRAAVDPTLRAG
>Mature_129_residues
MRRLRMAGAAAFAVATTLTGCVSTPSLNGTMGAPSFPDLQAMCGSQPADYGSDAQSVYVTLFDAYVASKRGGLSKADYCA
FQTALAQRYAAQGTSTDPELRRQWVEFFNAQRVKAMSWRAAVDPTLRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13800; Mature: 13800

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLRMAGAAAFAVATTLTGCVSTPSLNGTMGAPSFPDLQAMCGSQPADYGSDAQSVYVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHH
LFDAYVASKRGGLSKADYCAFQTALAQRYAAQGTSTDPELRRQWVEFFNAQRVKAMSWRA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVDPTLRAG
HCCCCCCCC
>Mature Secondary Structure
MRRLRMAGAAAFAVATTLTGCVSTPSLNGTMGAPSFPDLQAMCGSQPADYGSDAQSVYVT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHH
LFDAYVASKRGGLSKADYCAFQTALAQRYAAQGTSTDPELRRQWVEFFNAQRVKAMSWRA
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AVDPTLRAG
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA