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The map label for this gene is omp32 [H]

Identifier: 186475169

GI number: 186475169

Start: 458105

End: 459232

Strand: Direct

Name: omp32 [H]

Synonym: Bphy_0400

Alternate gene names: 186475169

Gene position: 458105-459232 (Clockwise)

Preceding gene: 186475168

Following gene: 186475170

Centisome position: 13.17

GC content: 60.46

Gene sequence:

>1128_bases
ATGACGAAGGTGAGCAAGAGAGTGACGATCTGCGCGTGGGCCGCGATGTCGCCTGCATTGACCTGCGGCGCGGCGTATGC
GCAGTCGAGCGTCACCTTGTACGGCATCGTCGACGAAAGCGTCCGCTATATGACGCACGTGAACAAGAACGGCGACTCGA
GCGTGGGACTCGGCAATGGTGGCATGTCGGAAAGTCGTTGGGGTTTGCGTGGCGTCGAGAATCTGGGCGGCGGCTGGTCT
ACGTTCTTCAAGCTCGAAAATCGTATCTACATCAACAGCGGACAAAGCGACCCAACGCTGCCGTTTTTCAACGAGGCGCA
GATTGGCGTGCAATCGTCGACATACGGCAAGCTGATTTTCGGGCGCATGCCGAACGTGCTGATCGAAGGCATTACGATCG
GCGGTTATGGCAGCAACCCGTGGATTCCGTATGACTTCAGCTTCCAGCCGGAAGTGACGATGTCGGGCGGCATCTGGACG
AGCAATCAGGTTCAGTATCAGGCGCGTGCGCATGACGTGATGTTGTCGGTAGCGTATGCGTTCGGCGGCGTCGCGGGGCA
CACGTCGTATGGATCGCAATTCGGCGCGGCGGCGGCGTACGCGCCGAATGGCGGACCGGTGAATTTGGGCGGCGCCTACG
AAGAGACGCGTGATTCCGTCAACGGCAGCACCGCGAAGGCCTGGACCTTCGGTGCGTCGTACACCTGGAATCAGACGCGC
TTCGCGCTCGGCTACATCGTCAATCAGAACGATGCGGGCTTTTCCAACTTCGCGAACGGGCCGTTCACGGCGCCTGTGCT
CGCCGCGCTCAAGTACACGGATTTTTCGCGGCGTCGCATGATACTGGGCGGCATCACGCAGCAGGTGGGTGCCGCGTGGC
ATTTCGCAGCGAATGTATGGCGGACTTTGCAGGACGGCAAGACGTCGGCGCAGGACGGCTCCGCATGGCAGTATCAGCTC
GTGGCCGACTACAGCCTGTCGAAGCGCACGGACGTCTATCTGGAAGGCGATTATGCGTTGTATCGCGGCGATCTGATCGG
CGCGCAGTTGCAGGGTGTCAATGGGGTTGGGCTGGCGCAGAAGGGTTCGCAGATTGGCTTGATGACGGGGCTGCGTCATC
TATTCTGA

Upstream 100 bases:

>100_bases
ACGCTTTCTTGCGCTTGCCATTTGCGGCGGCTGCGCTGCCGCGCCGCTTTAAGACATTCCCACGCAGTTCATGTGCAAGC
AGGGTGAATCAGGAGACGGT

Downstream 100 bases:

>100_bases
AGGTTGTCACTCAGCGAACGCGCGGCTTTTTCTGTACATTGACGTTCTCGACATCATCAAGCAACAAGGGAGTGTACGAT
GCGCCTTCTCCATACCATGC

Product: porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTKVSKRVTICAWAAMSPALTCGAAYAQSSVTLYGIVDESVRYMTHVNKNGDSSVGLGNGGMSESRWGLRGVENLGGGWS
TFFKLENRIYINSGQSDPTLPFFNEAQIGVQSSTYGKLIFGRMPNVLIEGITIGGYGSNPWIPYDFSFQPEVTMSGGIWT
SNQVQYQARAHDVMLSVAYAFGGVAGHTSYGSQFGAAAAYAPNGGPVNLGGAYEETRDSVNGSTAKAWTFGASYTWNQTR
FALGYIVNQNDAGFSNFANGPFTAPVLAALKYTDFSRRRMILGGITQQVGAAWHFAANVWRTLQDGKTSAQDGSAWQYQL
VADYSLSKRTDVYLEGDYALYRGDLIGAQLQGVNGVGLAQKGSQIGLMTGLRHLF

Sequences:

>Translated_375_residues
MTKVSKRVTICAWAAMSPALTCGAAYAQSSVTLYGIVDESVRYMTHVNKNGDSSVGLGNGGMSESRWGLRGVENLGGGWS
TFFKLENRIYINSGQSDPTLPFFNEAQIGVQSSTYGKLIFGRMPNVLIEGITIGGYGSNPWIPYDFSFQPEVTMSGGIWT
SNQVQYQARAHDVMLSVAYAFGGVAGHTSYGSQFGAAAAYAPNGGPVNLGGAYEETRDSVNGSTAKAWTFGASYTWNQTR
FALGYIVNQNDAGFSNFANGPFTAPVLAALKYTDFSRRRMILGGITQQVGAAWHFAANVWRTLQDGKTSAQDGSAWQYQL
VADYSLSKRTDVYLEGDYALYRGDLIGAQLQGVNGVGLAQKGSQIGLMTGLRHLF
>Mature_374_residues
TKVSKRVTICAWAAMSPALTCGAAYAQSSVTLYGIVDESVRYMTHVNKNGDSSVGLGNGGMSESRWGLRGVENLGGGWST
FFKLENRIYINSGQSDPTLPFFNEAQIGVQSSTYGKLIFGRMPNVLIEGITIGGYGSNPWIPYDFSFQPEVTMSGGIWTS
NQVQYQARAHDVMLSVAYAFGGVAGHTSYGSQFGAAAAYAPNGGPVNLGGAYEETRDSVNGSTAKAWTFGASYTWNQTRF
ALGYIVNQNDAGFSNFANGPFTAPVLAALKYTDFSRRRMILGGITQQVGAAWHFAANVWRTLQDGKTSAQDGSAWQYQLV
ADYSLSKRTDVYLEGDYALYRGDLIGAQLQGVNGVGLAQKGSQIGLMTGLRHLF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40354; Mature: 40222

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVSKRVTICAWAAMSPALTCGAAYAQSSVTLYGIVDESVRYMTHVNKNGDSSVGLGNG
CCCCCCEEEEEEEECCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCEECCCC
GMSESRWGLRGVENLGGGWSTFFKLENRIYINSGQSDPTLPFFNEAQIGVQSSTYGKLIF
CCCCCCCCCCCHHHCCCCCEEEEEEECEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEE
GRMPNVLIEGITIGGYGSNPWIPYDFSFQPEVTMSGGIWTSNQVQYQARAHDVMLSVAYA
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEECCCCEEEHHHHHHHHHHHHHH
FGGVAGHTSYGSQFGAAAAYAPNGGPVNLGGAYEETRDSVNGSTAKAWTFGASYTWNQTR
HCCCCCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHCCCCCEEEEEECCEEECCCCE
FALGYIVNQNDAGFSNFANGPFTAPVLAALKYTDFSRRRMILGGITQQVGAAWHFAANVW
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHCEEEEHHHHHHHHHHHHHHHHHH
RTLQDGKTSAQDGSAWQYQLVADYSLSKRTDVYLEGDYALYRGDLIGAQLQGVNGVGLAQ
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEECCEEEEEECCCCCCCCCC
KGSQIGLMTGLRHLF
CCCEEHHHHHHHHHC
>Mature Secondary Structure 
TKVSKRVTICAWAAMSPALTCGAAYAQSSVTLYGIVDESVRYMTHVNKNGDSSVGLGNG
CCCCCEEEEEEEECCCCHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCCCCEECCCC
GMSESRWGLRGVENLGGGWSTFFKLENRIYINSGQSDPTLPFFNEAQIGVQSSTYGKLIF
CCCCCCCCCCCHHHCCCCCEEEEEEECEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEE
GRMPNVLIEGITIGGYGSNPWIPYDFSFQPEVTMSGGIWTSNQVQYQARAHDVMLSVAYA
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCEECCCCEEEHHHHHHHHHHHHHH
FGGVAGHTSYGSQFGAAAAYAPNGGPVNLGGAYEETRDSVNGSTAKAWTFGASYTWNQTR
HCCCCCCCCCCCCCCCEEEECCCCCEECCCCCHHHHHHHCCCCCEEEEEECCEEECCCCE
FALGYIVNQNDAGFSNFANGPFTAPVLAALKYTDFSRRRMILGGITQQVGAAWHFAANVW
EEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHCEEEEHHHHHHHHHHHHHHHHHH
RTLQDGKTSAQDGSAWQYQLVADYSLSKRTDVYLEGDYALYRGDLIGAQLQGVNGVGLAQ
HHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEECCCEEEEECCEEEEEECCCCCCCCCC
KGSQIGLMTGLRHLF
CCCEEHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]