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The map label for this gene is ydgJ [H]

Identifier: 186475132

GI number: 186475132

Start: 411390

End: 411860

Strand: Direct

Name: ydgJ [H]

Synonym: Bphy_0363

Alternate gene names: 186475132

Gene position: 411390-411860 (Clockwise)

Preceding gene: 186475131

Following gene: 186475134

Centisome position: 11.82

GC content: 66.03

Gene sequence:

>471_bases
ATGGAAGAACAGGACCGCGTCGCTATCCTTCATCAGTTTGGCCGCACGTATCGCGCGTTCATGTCGGCGTTCGAAGGACG
CGTCGGACACCCGATGCCGCGCTGGCGCATTCTGCTGGCGCTCTACGAGCAGGCTGGCGAGTCGTCGCAGAAGAAACTGG
TCGAGCGTCTGCGCATCGATCCGGGTGCGCTCACGCGACAGCTGAAGTCGCTCGAAGCGATGGGCTGGATCGCGCGCAGC
ATGGACGAGCGCGACAACCGCATCACGAACGTGAAGCTCACGACGGAAGGCCGCGCGGCGATCGAAACGAGCCTGCCGAG
CCGGAACGCGTTCCTGCACGACACGATGGCGGCCTTGCCCGACCATGTGCTCGCCGGCCTGTCGAGCGCGCTGACGATGC
TCGAAGCGCGCATCGGCGAAGTGGCGGCAGGCGCGTCGACCGATGCGGAGTCTGCCGACGCAGGGCGTTGA

Upstream 100 bases:

>100_bases
GAGCCGGCGCGTACCGCCCGTCAAGCTGCGCAAGCAGGTCGAGCCGGTCGTCCATGTAGACTGACGGTCGTTTTAGCGCT
TCGGAAATTGTAGAAAGATC

Downstream 100 bases:

>100_bases
AGAAATAAAAAAAGCGGCACTATGCAGTTCACACAGCGCCGCTTGCTCGACGAGGCGATTGAAGAACGATCAGAAGAACG
TTTCGATCACTTCCGTGACG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MEEQDRVAILHQFGRTYRAFMSAFEGRVGHPMPRWRILLALYEQAGESSQKKLVERLRIDPGALTRQLKSLEAMGWIARS
MDERDNRITNVKLTTEGRAAIETSLPSRNAFLHDTMAALPDHVLAGLSSALTMLEARIGEVAAGASTDAESADAGR

Sequences:

>Translated_156_residues
MEEQDRVAILHQFGRTYRAFMSAFEGRVGHPMPRWRILLALYEQAGESSQKKLVERLRIDPGALTRQLKSLEAMGWIARS
MDERDNRITNVKLTTEGRAAIETSLPSRNAFLHDTMAALPDHVLAGLSSALTMLEARIGEVAAGASTDAESADAGR
>Mature_156_residues
MEEQDRVAILHQFGRTYRAFMSAFEGRVGHPMPRWRILLALYEQAGESSQKKLVERLRIDPGALTRQLKSLEAMGWIARS
MDERDNRITNVKLTTEGRAAIETSLPSRNAFLHDTMAALPDHVLAGLSSALTMLEARIGEVAAGASTDAESADAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17222; Mature: 17222

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQDRVAILHQFGRTYRAFMSAFEGRVGHPMPRWRILLALYEQAGESSQKKLVERLRID
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PGALTRQLKSLEAMGWIARSMDERDNRITNVKLTTEGRAAIETSLPSRNAFLHDTMAALP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHH
DHVLAGLSSALTMLEARIGEVAAGASTDAESADAGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MEEQDRVAILHQFGRTYRAFMSAFEGRVGHPMPRWRILLALYEQAGESSQKKLVERLRID
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PGALTRQLKSLEAMGWIARSMDERDNRITNVKLTTEGRAAIETSLPSRNAFLHDTMAALP
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCCCCHHHHHHHHHHH
DHVLAGLSSALTMLEARIGEVAAGASTDAESADAGR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]