| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yusP [H]
Identifier: 186475131
GI number: 186475131
Start: 409827
End: 411353
Strand: Direct
Name: yusP [H]
Synonym: Bphy_0362
Alternate gene names: 186475131
Gene position: 409827-411353 (Clockwise)
Preceding gene: 186475129
Following gene: 186475132
Centisome position: 11.78
GC content: 64.11
Gene sequence:
>1527_bases ATGCTCGGCGTCTCGTTCGTCTCGATGCTGGTCGCGCTCGACCAGACAGTCGTCGGCACTGCGCTGCCGACTATCGTCGC GGATCTCAAGGGTTTCGAGCTGTACGCATGGGTCGCGACGTCGTATTTGCTGACTTCCGTGATCACCGTGCCGATTTTCG GGCGCCTCGGCGACTACTACGGGCGCAAGCCATTTGTGATCGCGTCGATCGTCGTGTTCACGGCGGCGTCCGTGCTCTGC GGTGCGGCCAACAACATGCTGTTTCTGGTGATCGCGCGCGGCTTGCAGGGCATCGGCGGCGGCATGCTGGTCGGCACCGC GTTCGCCTGCATTCCCGATCTGTTTCCCGATTCCGTGGTGCGCCTGCGCTGGCAGGTGTTGATGAGCACGGCGTTCGGCA TTGCCAACGCGGTGGGACCGTCACTCGGCGGTTTTCTCACCCAATATTACGGCTGGCGCTCGGTGTTCTATGTAAATCTG CCCGTCGGCCTGCTGTCGCTGTTTTTTGTCTGGCGATATCTGCCGCACCTTCGGCACGTCGTTCATGAAGGCAAGATGCG GCTCGACTGGCCCGGCGCGTTGCTAATCGCGCTGTCGCTAGGCAGCTTGCAGGTGTTCGTCGAACTGCTGCCGAAGCACG GCGTGACGGCGTCGGCGGCCGGCTTGCTGGTCCTGAGCGTCGCGAGCGCGATCGCGCTGTGGCAATGGGAGAAGCGCTTC CCGCAAGCCATTCTTCCCGTCGACATGTTCCGCAACGGGAGCCTGTCTGCGCTGTTCATGCTGGCCGTGCTCGGCGGCTT CGCAATGTTCTCGCTGCTGTTCTATGCGCCGCTGCTGTTTCAGGGCGGATTCGGCATGATGCCGAACGAGGCTGGGCTCG TGATCACGCCGCTCGTCGTCTTCATCACGATCGGCAGCATCGCGAACGGGCGCATCGTGTCGCGCATTCCGAATCCGAAC GTGATGCTGTTCGTCGGTTTCGCGCTGTTTGCGGCGGCGTCGCTCGGCGTGGTGATCGCGACGCGTTCGATGCCGCACTG GCTGCTGATGCTGTTCATGACGCTCGGCGGCCTCGGCCTCGGTTTCGTGCTGCCGAATCTCACCGTGTTCGCGCAGCAGA CGGCGGGCCGCGAGCATCTCGGCATCGCGACGGCGCTGCTGCAGTCGCTGCGCATGATCGGCGGGATGATCGGCACGGCG TTGACGGGCACGCTCGTCACGCATATGTACGCGAGCGGCGTGCGCAGCGCGCTCGATGGCGACCATGCGTACAAGTGGTT CGCCGATCTGGGCGATCCGCAGATTCTCGTGAATCGCGATGCCCAGCAGACGCTTTTAGGCGAGATGGCGCGGGCCGGAC ACAACGGCGCGCTGCTGCTGGAGTCGGCGCGCGAATCGCTGGTTGGCGCGATCCATATGGGCCTGGCGCTTGGTGCGCTG GTGTCGATCCTTGCAATCTGGCAGAGCCGGCGCGTACCGCCCGTCAAGCTGCGCAAGCAGGTCGAGCCGGTCGTCCATGT AGACTGA
Upstream 100 bases:
>100_bases GTTGACGCGTCAACAGTTGTTCTATCAAAAAATGGCCGTGCATACCGCCGCCCACCATTCGAGTGGGCAAGTTTTACCTT TCCGGGAGTCGCTGCTGGCG
Downstream 100 bases:
>100_bases CGGTCGTTTTAGCGCTTCGGAAATTGTAGAAAGATCATGGAAGAACAGGACCGCGTCGCTATCCTTCATCAGTTTGGCCG CACGTATCGCGCGTTCATGT
Product: EmrB/QacA family drug resistance transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MLGVSFVSMLVALDQTVVGTALPTIVADLKGFELYAWVATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLC GAANNMLFLVIARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSTAFGIANAVGPSLGGFLTQYYGWRSVFYVNL PVGLLSLFFVWRYLPHLRHVVHEGKMRLDWPGALLIALSLGSLQVFVELLPKHGVTASAAGLLVLSVASAIALWQWEKRF PQAILPVDMFRNGSLSALFMLAVLGGFAMFSLLFYAPLLFQGGFGMMPNEAGLVITPLVVFITIGSIANGRIVSRIPNPN VMLFVGFALFAAASLGVVIATRSMPHWLLMLFMTLGGLGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMIGGMIGTA LTGTLVTHMYASGVRSALDGDHAYKWFADLGDPQILVNRDAQQTLLGEMARAGHNGALLLESARESLVGAIHMGLALGAL VSILAIWQSRRVPPVKLRKQVEPVVHVD
Sequences:
>Translated_508_residues MLGVSFVSMLVALDQTVVGTALPTIVADLKGFELYAWVATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLC GAANNMLFLVIARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSTAFGIANAVGPSLGGFLTQYYGWRSVFYVNL PVGLLSLFFVWRYLPHLRHVVHEGKMRLDWPGALLIALSLGSLQVFVELLPKHGVTASAAGLLVLSVASAIALWQWEKRF PQAILPVDMFRNGSLSALFMLAVLGGFAMFSLLFYAPLLFQGGFGMMPNEAGLVITPLVVFITIGSIANGRIVSRIPNPN VMLFVGFALFAAASLGVVIATRSMPHWLLMLFMTLGGLGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMIGGMIGTA LTGTLVTHMYASGVRSALDGDHAYKWFADLGDPQILVNRDAQQTLLGEMARAGHNGALLLESARESLVGAIHMGLALGAL VSILAIWQSRRVPPVKLRKQVEPVVHVD >Mature_508_residues MLGVSFVSMLVALDQTVVGTALPTIVADLKGFELYAWVATSYLLTSVITVPIFGRLGDYYGRKPFVIASIVVFTAASVLC GAANNMLFLVIARGLQGIGGGMLVGTAFACIPDLFPDSVVRLRWQVLMSTAFGIANAVGPSLGGFLTQYYGWRSVFYVNL PVGLLSLFFVWRYLPHLRHVVHEGKMRLDWPGALLIALSLGSLQVFVELLPKHGVTASAAGLLVLSVASAIALWQWEKRF PQAILPVDMFRNGSLSALFMLAVLGGFAMFSLLFYAPLLFQGGFGMMPNEAGLVITPLVVFITIGSIANGRIVSRIPNPN VMLFVGFALFAAASLGVVIATRSMPHWLLMLFMTLGGLGLGFVLPNLTVFAQQTAGREHLGIATALLQSLRMIGGMIGTA LTGTLVTHMYASGVRSALDGDHAYKWFADLGDPQILVNRDAQQTLLGEMARAGHNGALLLESARESLVGAIHMGLALGAL VSILAIWQSRRVPPVKLRKQVEPVVHVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=414, Percent_Identity=26.8115942028986, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1790195, Length=323, Percent_Identity=28.1733746130031, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1789042, Length=419, Percent_Identity=23.6276849642005, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1788392, Length=373, Percent_Identity=29.2225201072386, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1788710, Length=412, Percent_Identity=25.4854368932039, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1790146, Length=170, Percent_Identity=32.3529411764706, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=477, Percent_Identity=24.9475890985325, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6323735, Length=316, Percent_Identity=25.6329113924051, Blast_Score=83, Evalue=9e-17, Organism=Saccharomyces cerevisiae, GI6322958, Length=183, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6325455, Length=224, Percent_Identity=28.125, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6321663, Length=150, Percent_Identity=32.6666666666667, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54481; Mature: 54481
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGVSFVSMLVALDQTVVGTALPTIVADLKGFELYAWVATSYLLTSVITVPIFGRLGDYY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRKPFVIASIVVFTAASVLCGAANNMLFLVIARGLQGIGGGMLVGTAFACIPDLFPDSVV CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH RLRWQVLMSTAFGIANAVGPSLGGFLTQYYGWRSVFYVNLPVGLLSLFFVWRYLPHLRHV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH VHEGKMRLDWPGALLIALSLGSLQVFVELLPKHGVTASAAGLLVLSVASAIALWQWEKRF HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PQAILPVDMFRNGSLSALFMLAVLGGFAMFSLLFYAPLLFQGGFGMMPNEAGLVITPLVV CCHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH FITIGSIANGRIVSRIPNPNVMLFVGFALFAAASLGVVIATRSMPHWLLMLFMTLGGLGL HHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHH GFVLPNLTVFAQQTAGREHLGIATALLQSLRMIGGMIGTALTGTLVTHMYASGVRSALDG HHHHCCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHAYKWFADLGDPQILVNRDAQQTLLGEMARAGHNGALLLESARESLVGAIHMGLALGAL CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH VSILAIWQSRRVPPVKLRKQVEPVVHVD HHHHHHHHHCCCCHHHHHHHCCCCEECC >Mature Secondary Structure MLGVSFVSMLVALDQTVVGTALPTIVADLKGFELYAWVATSYLLTSVITVPIFGRLGDYY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRKPFVIASIVVFTAASVLCGAANNMLFLVIARGLQGIGGGMLVGTAFACIPDLFPDSVV CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHH RLRWQVLMSTAFGIANAVGPSLGGFLTQYYGWRSVFYVNLPVGLLSLFFVWRYLPHLRHV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHH VHEGKMRLDWPGALLIALSLGSLQVFVELLPKHGVTASAAGLLVLSVASAIALWQWEKRF HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC PQAILPVDMFRNGSLSALFMLAVLGGFAMFSLLFYAPLLFQGGFGMMPNEAGLVITPLVV CCHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH FITIGSIANGRIVSRIPNPNVMLFVGFALFAAASLGVVIATRSMPHWLLMLFMTLGGLGL HHHHCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCCHH GFVLPNLTVFAQQTAGREHLGIATALLQSLRMIGGMIGTALTGTLVTHMYASGVRSALDG HHHHCCHHHEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHAYKWFADLGDPQILVNRDAQQTLLGEMARAGHNGALLLESARESLVGAIHMGLALGAL CHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHH VSILAIWQSRRVPPVKLRKQVEPVVHVD HHHHHHHHHCCCCHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]