| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is apt
Identifier: 186475102
GI number: 186475102
Start: 375110
End: 375676
Strand: Direct
Name: apt
Synonym: Bphy_0333
Alternate gene names: 186475102
Gene position: 375110-375676 (Clockwise)
Preceding gene: 186475101
Following gene: 186475103
Centisome position: 10.78
GC content: 61.73
Gene sequence:
>567_bases ATGTCTCACGCGCCCGCGAATCGGCCATTCGATCCCGCCGAATACATCAACAGCGAAATTCGTACGGTGCCCGACTGGCC CCAAGCCGGCGTGCAGTTCCGCGATATCACGCCGCTTCTGCAAAAACCGAAATCGCTGCGCGTGCTGATCGATCTGTTCG TGCAGCGTTATATCGACCAGAAGCTCGATTACGTGGCCGGTCTCGACGCGCGCGGTTTCATCATCGGGCCGATTCTCGCG TATGAGCTGAACCTCGGCTTCATTCCGATCCGAAAGATCGGCAAGCTGCCGTTCAGGACGGTGTCCGAATCGTACGAACT CGAATACGGCTCCGCGACCGTCGAAATTCACGAGGACGCTTGCAAGCCGGGCGACCGGGTCGTGATCGTCGACGATCTGA TCGCAACGGGCGGGACGATGATGGCGGGCAAGAAGCTGCTCGAACGGTTGGGCGCGACGGTGATCGAAGGCGCGGCGATC GTCGATCTGCCCGACCTCGGCGGCTCGAAGTTGCTGCGCGGCGCGGGCCTTCCGCTTTTCACCGTCACGTCGTTCGGCGG CCACTGA
Upstream 100 bases:
>100_bases GATCACGCGACGCGCTGTTCCCCACGTTTGTCGGACGCGCGCTGCACTCAGGCAACTCACTGGAATTATCAGGGTCCTCA CAAGCCCGTCTGGAGTCATC
Downstream 100 bases:
>100_bases TCTCAAACAACGGAGTGTTTGCGCGATGCCCAACTTCCTGCTTTTTCTCGCGACGTCGATAGCGATCACGTTTGCGCCCG GTCCCGACAATCTGCAGGTT
Product: adenine phosphoribosyltransferase
Products: NA
Alternate protein names: APRT
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSHAPANRPFDPAEYINSEIRTVPDWPQAGVQFRDITPLLQKPKSLRVLIDLFVQRYIDQKLDYVAGLDARGFIIGPILA YELNLGFIPIRKIGKLPFRTVSESYELEYGSATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKKLLERLGATVIEGAAI VDLPDLGGSKLLRGAGLPLFTVTSFGGH
Sequences:
>Translated_188_residues MSHAPANRPFDPAEYINSEIRTVPDWPQAGVQFRDITPLLQKPKSLRVLIDLFVQRYIDQKLDYVAGLDARGFIIGPILA YELNLGFIPIRKIGKLPFRTVSESYELEYGSATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKKLLERLGATVIEGAAI VDLPDLGGSKLLRGAGLPLFTVTSFGGH >Mature_187_residues SHAPANRPFDPAEYINSEIRTVPDWPQAGVQFRDITPLLQKPKSLRVLIDLFVQRYIDQKLDYVAGLDARGFIIGPILAY ELNLGFIPIRKIGKLPFRTVSESYELEYGSATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKKLLERLGATVIEGAAIV DLPDLGGSKLLRGAGLPLFTVTSFGGH
Specific function: Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
COG id: COG0503
COG function: function code F; Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family
Homologues:
Organism=Homo sapiens, GI4502171, Length=176, Percent_Identity=48.8636363636364, Blast_Score=157, Evalue=5e-39, Organism=Homo sapiens, GI71773201, Length=127, Percent_Identity=51.9685039370079, Blast_Score=129, Evalue=1e-30, Organism=Escherichia coli, GI1786675, Length=175, Percent_Identity=48, Blast_Score=176, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17509087, Length=159, Percent_Identity=45.2830188679245, Blast_Score=126, Evalue=7e-30, Organism=Saccharomyces cerevisiae, GI6323619, Length=176, Percent_Identity=38.0681818181818, Blast_Score=115, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320649, Length=174, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=5e-20, Organism=Drosophila melanogaster, GI17136334, Length=173, Percent_Identity=41.0404624277457, Blast_Score=131, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APT_BURP8 (B2JCQ7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001856572.1 - ProteinModelPortal: B2JCQ7 - SMR: B2JCQ7 - GeneID: 6241835 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_0333 - HOGENOM: HBG703830 - OMA: GILFYDI - ProtClustDB: PRK02304 - GO: GO:0005737 - HAMAP: MF_00004 - InterPro: IPR005764 - InterPro: IPR000836 - TIGRFAMs: TIGR01090
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.7
Molecular weight: Translated: 20519; Mature: 20388
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAPANRPFDPAEYINSEIRTVPDWPQAGVQFRDITPLLQKPKSLRVLIDLFVQRYIDQ CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHH KLDYVAGLDARGFIIGPILAYELNLGFIPIRKIGKLPFRTVSESYELEYGSATVEIHEDA HHHHHHCCCCCCEEECCEEEEEECCCEECHHHHCCCCCHHCCCCEEEECCCEEEEEECCC CKPGDRVVIVDDLIATGGTMMAGKKLLERLGATVIEGAAIVDLPDLGGSKLLRGAGLPLF CCCCCEEEEEECHHHCCCHHHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHCCCCCEE TVTSFGGH EECCCCCC >Mature Secondary Structure SHAPANRPFDPAEYINSEIRTVPDWPQAGVQFRDITPLLQKPKSLRVLIDLFVQRYIDQ CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHH KLDYVAGLDARGFIIGPILAYELNLGFIPIRKIGKLPFRTVSESYELEYGSATVEIHEDA HHHHHHCCCCCCEEECCEEEEEECCCEECHHHHCCCCCHHCCCCEEEECCCEEEEEECCC CKPGDRVVIVDDLIATGGTMMAGKKLLERLGATVIEGAAIVDLPDLGGSKLLRGAGLPLF CCCCCEEEEEECHHHCCCHHHHHHHHHHHHCHHHHCCEEEEECCCCCCHHHHHCCCCCEE TVTSFGGH EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA