| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is ctaE [H]
Identifier: 186475050
GI number: 186475050
Start: 322264
End: 323121
Strand: Direct
Name: ctaE [H]
Synonym: Bphy_0281
Alternate gene names: 186475050
Gene position: 322264-323121 (Clockwise)
Preceding gene: 186475049
Following gene: 186475052
Centisome position: 9.26
GC content: 61.66
Gene sequence:
>858_bases ATGAGCGGTCAAAACGAGAGCCCGTACTATTTCATACCGCATCCGTCGCGGCATCCGATCAGCGCGGCCGTTGGCCTGCT GGTCATGCTCGGATCGTTTGCGGCGTGGGTGAACGGCGAGCCGTGGGCGCCCATCACGGCGCTGATCGGTCTGCTGTGGC TGCTGTTCACGCTGTACCACTGGTTCGGCGATGCGATCTCCGAGTCGGAAGGCGGCATGTACGGCAAGCGTGTCGACACG TCGTTCCGCTGGAGCATGAGCTGGTTCATCTTCTCCGAAGTCATGTTCTTCGGCGCGTTCTTCGGCGCGCTGTTCTACGC GCGTGAGATCGCGATGCATCAGCTGGGCAGTCTTGACTACAAGCTGATCTGGCCGGATTTCACCGCGGTATGGCCGAATA TCGGGCCGGCCGACCTTGTGTCGCACTTCAAGTCGATGACACCGTGGCCCGTACCCACCATCAACACCGCGCTGCTGCTG TCGTCGGGCGCGACGTTGACGGTCTCGCATCACGCGCTGCGCGACAATCACCGCACGAAGGCAATCGCATGGCTCGCGGC CACGCTGGTGCTGGGCGTGTCGTTCCTGTTCCTGCAAGGCTTCGAGTATTTCCACGCGTACAACGAACTGAACCTGACGC TCGCATCGGGCGTGTACGGCTCGACGTTCTTCCTGCTGACGGGCTTCCATGGTTTTCACGTGTTCCTCGGCGGCACGATG CTGGCGGTGGTGCTGGTGCGGCTGATCCGTGGCCACTTCACGGCTGATCATCACTTCGCCTTCGAGGGCGCGGCGTGGTA CTGGCACTTTGTCGACGTCGTGTGGCTGGGTCTGTACGTCGTCGTGTATTGGCTGTAA
Upstream 100 bases:
>100_bases GCAACGCAGCGCGCCGCAGGAGAGAGCCGGGGCGCAGCGCAGTCGGCTGCGGATTCAACCGGACCAAGCGGAACAACTGG ACTGAAGTGGAGAAACAACA
Downstream 100 bases:
>100_bases GCGTTGTTTGAAAGTTGCAAAGCGGCTGCGCGCCATGCGTCACATCGACGCAGTGCGGCCGCGAAGGCCGATCGGAAGAA GTCGTAGACAGCGCCGCCCT
Product: cytochrome c oxidase subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSGQNESPYYFIPHPSRHPISAAVGLLVMLGSFAAWVNGEPWAPITALIGLLWLLFTLYHWFGDAISESEGGMYGKRVDT SFRWSMSWFIFSEVMFFGAFFGALFYAREIAMHQLGSLDYKLIWPDFTAVWPNIGPADLVSHFKSMTPWPVPTINTALLL SSGATLTVSHHALRDNHRTKAIAWLAATLVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM LAVVLVRLIRGHFTADHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Sequences:
>Translated_285_residues MSGQNESPYYFIPHPSRHPISAAVGLLVMLGSFAAWVNGEPWAPITALIGLLWLLFTLYHWFGDAISESEGGMYGKRVDT SFRWSMSWFIFSEVMFFGAFFGALFYAREIAMHQLGSLDYKLIWPDFTAVWPNIGPADLVSHFKSMTPWPVPTINTALLL SSGATLTVSHHALRDNHRTKAIAWLAATLVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM LAVVLVRLIRGHFTADHHFAFEGAAWYWHFVDVVWLGLYVVVYWL >Mature_284_residues SGQNESPYYFIPHPSRHPISAAVGLLVMLGSFAAWVNGEPWAPITALIGLLWLLFTLYHWFGDAISESEGGMYGKRVDTS FRWSMSWFIFSEVMFFGAFFGALFYAREIAMHQLGSLDYKLIWPDFTAVWPNIGPADLVSHFKSMTPWPVPTINTALLLS SGATLTVSHHALRDNHRTKAIAWLAATLVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTML AVVLVRLIRGHFTADHHFAFEGAAWYWHFVDVVWLGLYVVVYWL
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=281, Percent_Identity=39.5017793594306, Blast_Score=163, Evalue=2e-40, Organism=Escherichia coli, GI1786633, Length=142, Percent_Identity=32.3943661971831, Blast_Score=71, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6226542, Length=227, Percent_Identity=36.5638766519824, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 32174; Mature: 32043
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGQNESPYYFIPHPSRHPISAAVGLLVMLGSFAAWVNGEPWAPITALIGLLWLLFTLYH CCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH WFGDAISESEGGMYGKRVDTSFRWSMSWFIFSEVMFFGAFFGALFYAREIAMHQLGSLDY HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLIWPDFTAVWPNIGPADLVSHFKSMTPWPVPTINTALLLSSGATLTVSHHALRDNHRTK EEECCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEHHHHHCCCHHH AIAWLAATLVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCHHHHHHHHHHHH LAVVLVRLIRGHFTADHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGQNESPYYFIPHPSRHPISAAVGLLVMLGSFAAWVNGEPWAPITALIGLLWLLFTLYH CCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH WFGDAISESEGGMYGKRVDTSFRWSMSWFIFSEVMFFGAFFGALFYAREIAMHQLGSLDY HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE KLIWPDFTAVWPNIGPADLVSHFKSMTPWPVPTINTALLLSSGATLTVSHHALRDNHRTK EEECCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEECCCEEEEEHHHHHCCCHHH AIAWLAATLVLGVSFLFLQGFEYFHAYNELNLTLASGVYGSTFFLLTGFHGFHVFLGGTM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCHHHHHHHCHHHHHHHHHHHH LAVVLVRLIRGHFTADHHFAFEGAAWYWHFVDVVWLGLYVVVYWL HHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]