| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475014
Identifier: 186475014
GI number: 186475014
Start: 286279
End: 287766
Strand: Direct
Name: 186475014
Synonym: Bphy_0245
Alternate gene names: NA
Gene position: 286279-287766 (Clockwise)
Preceding gene: 186475013
Following gene: 186475015
Centisome position: 8.23
GC content: 52.89
Gene sequence:
>1488_bases ATGAGCAAGCAACTGCGAAAAGCAATCACTGACGAATTGCACCGGCGACACGGATATCGGGTGATGGAGGCAAAAATCAA GCCGGTTCATATCGCGAATGCACTGATGCGCGTTGAACATGAATGCGTCGGAAAAATGAATGTTCTCCAGCAACTTTTCG AGGCAACAGTAGCCAAAAACAGTCTGGACCAGAAGTTGAACGCGGCGCGTTTGATGCTTGATGCGCAACGCGACCGTTGG GGCGCGTTGGGTCAGACCGCCGATCTAAAATCATCGGCGCTCTTGAATAAGGTGCTTCCGCTCTTGCGTACACTTTTAGG CGCTGACGGTGCGCTATTCGGAACTTCCCCGGACCTATCGTCTTTTTCATCACCAACATCGTTGACAGTGACAGGTGATC CGTCTGATGACGGGGCAGGTGCATTTGTGTTCAAACTCTGGGGAGGACATGAAGAAGCAACGCGGCTCCCTGTCTTGGAT TTGCTCTCAGAACTTACGTCGCCCCGGAAAGATCCGGCACAGATCGACGATCTTTCTGCTTTGTTGATACCGTTGGTCGA TTCAACACGCGCGAAATCGGCACCAGAGTTCAATGCCGAGGATTTGATTTCGGATTATTCGAATGTTGAAAAGCAATTGC GACTCGCAGCGTCGCGCCTGTGTGCCTACGAACGTAAGTTAAATCCCAATCCCATCGCGAGTCTGCAACGCGTTGTGCTT CTTGCTGCGCTCTCCGTCTTCCGACATGGTGCAACGCGGGCCCACGAGCGTGCCGGCGGCCCAGAGCGGTTCCTTCTTCT TGATGCATCGGGTGACCATTATTCTGCGGTGGCTCAAGCTAGCACTGGCTGCGTGACCCAATTGATCAATGACGCATGTC GATATATGGCATCTGTCGTCAACGATCTCCTTACTTCACAGATCGCCAATTGGCCGGTAGAGCCAATCGCCGCCATTAAT AGCTTGCTCGAATCGAGTGGGCAAGCACCGCTGGAACCCAACAGCCCTCTTTCACGGAGGATCACCGACATAGTGAAAGA TTTCGACGATCCTGAAGATATAAGACGGGAGGTCGCCGAAGAGTTGATCCGACAAGTGGAAGGCAATCAACGAAGAGGTC TTGACGGATATTTGCGTTTGCTCGGAATTCGGTCGGGCTTCCTTTACCCGACGCAAAAAAATCCCAACAAGCGGCTTAAT CCGACCGACAGGACGTTGGAGGTCCTGGTCGCCTCTACCGTCGATGTACATGGTCCGATTTTGGAGTATCGGGATTTCTT GGAGGAGTTGAAGACCCGTTGGGCAATCGTGGTTGGCGGAAGAACGGAGGATGCCCTGATTTTGTCCCACGTAGGCGCAA GTGTTCCGGCAAAGGCATTGCGTGAAAATAGTGAACGGTTCTTATCCCGTCTTGAATCGCTTGGTTTGGCCCGTCGTCTC GCAGATAGCGTGGCCGTGGTAGGTTTGTTGGAGGCGACGCATGAGTGA
Upstream 100 bases:
>100_bases GTGCGAACCATCGAAATCGTTGATCCCCAGAGTGAACTTCGAACTACCGTGGTCGTTGATCTGATAAACGGTCGGTACGA TTCCGCAAATTGAGAAAAAT
Downstream 100 bases:
>100_bases ACTGATGGTTGAAATTTCGAATCAAGTCAGTCGGCAGATCACGGACCTGTTGCTTGCCGAGTTGGATGCATCAACTGGGC GCGGAGAGTTCGGTGTCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSKQLRKAITDELHRRHGYRVMEAKIKPVHIANALMRVEHECVGKMNVLQQLFEATVAKNSLDQKLNAARLMLDAQRDRW GALGQTADLKSSALLNKVLPLLRTLLGADGALFGTSPDLSSFSSPTSLTVTGDPSDDGAGAFVFKLWGGHEEATRLPVLD LLSELTSPRKDPAQIDDLSALLIPLVDSTRAKSAPEFNAEDLISDYSNVEKQLRLAASRLCAYERKLNPNPIASLQRVVL LAALSVFRHGATRAHERAGGPERFLLLDASGDHYSAVAQASTGCVTQLINDACRYMASVVNDLLTSQIANWPVEPIAAIN SLLESSGQAPLEPNSPLSRRITDIVKDFDDPEDIRREVAEELIRQVEGNQRRGLDGYLRLLGIRSGFLYPTQKNPNKRLN PTDRTLEVLVASTVDVHGPILEYRDFLEELKTRWAIVVGGRTEDALILSHVGASVPAKALRENSERFLSRLESLGLARRL ADSVAVVGLLEATHE
Sequences:
>Translated_495_residues MSKQLRKAITDELHRRHGYRVMEAKIKPVHIANALMRVEHECVGKMNVLQQLFEATVAKNSLDQKLNAARLMLDAQRDRW GALGQTADLKSSALLNKVLPLLRTLLGADGALFGTSPDLSSFSSPTSLTVTGDPSDDGAGAFVFKLWGGHEEATRLPVLD LLSELTSPRKDPAQIDDLSALLIPLVDSTRAKSAPEFNAEDLISDYSNVEKQLRLAASRLCAYERKLNPNPIASLQRVVL LAALSVFRHGATRAHERAGGPERFLLLDASGDHYSAVAQASTGCVTQLINDACRYMASVVNDLLTSQIANWPVEPIAAIN SLLESSGQAPLEPNSPLSRRITDIVKDFDDPEDIRREVAEELIRQVEGNQRRGLDGYLRLLGIRSGFLYPTQKNPNKRLN PTDRTLEVLVASTVDVHGPILEYRDFLEELKTRWAIVVGGRTEDALILSHVGASVPAKALRENSERFLSRLESLGLARRL ADSVAVVGLLEATHE >Mature_494_residues SKQLRKAITDELHRRHGYRVMEAKIKPVHIANALMRVEHECVGKMNVLQQLFEATVAKNSLDQKLNAARLMLDAQRDRWG ALGQTADLKSSALLNKVLPLLRTLLGADGALFGTSPDLSSFSSPTSLTVTGDPSDDGAGAFVFKLWGGHEEATRLPVLDL LSELTSPRKDPAQIDDLSALLIPLVDSTRAKSAPEFNAEDLISDYSNVEKQLRLAASRLCAYERKLNPNPIASLQRVVLL AALSVFRHGATRAHERAGGPERFLLLDASGDHYSAVAQASTGCVTQLINDACRYMASVVNDLLTSQIANWPVEPIAAINS LLESSGQAPLEPNSPLSRRITDIVKDFDDPEDIRREVAEELIRQVEGNQRRGLDGYLRLLGIRSGFLYPTQKNPNKRLNP TDRTLEVLVASTVDVHGPILEYRDFLEELKTRWAIVVGGRTEDALILSHVGASVPAKALRENSERFLSRLESLGLARRLA DSVAVVGLLEATHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54330; Mature: 54198
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQLRKAITDELHRRHGYRVMEAKIKPVHIANALMRVEHECVGKMNVLQQLFEATVAKN CCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLDQKLNAARLMLDAQRDRWGALGQTADLKSSALLNKVLPLLRTLLGADGALFGTSPDLS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SFSSPTSLTVTGDPSDDGAGAFVFKLWGGHEEATRLPVLDLLSELTSPRKDPAQIDDLSA CCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHH LLIPLVDSTRAKSAPEFNAEDLISDYSNVEKQLRLAASRLCAYERKLNPNPIASLQRVVL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAALSVFRHGATRAHERAGGPERFLLLDASGDHYSAVAQASTGCVTQLINDACRYMASVV HHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLLTSQIANWPVEPIAAINSLLESSGQAPLEPNSPLSRRITDIVKDFDDPEDIRREVAE HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH ELIRQVEGNQRRGLDGYLRLLGIRSGFLYPTQKNPNKRLNPTDRTLEVLVASTVDVHGPI HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH LEYRDFLEELKTRWAIVVGGRTEDALILSHVGASVPAKALRENSERFLSRLESLGLARRL HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHH ADSVAVVGLLEATHE HHHHHHHHHHHHCCC >Mature Secondary Structure SKQLRKAITDELHRRHGYRVMEAKIKPVHIANALMRVEHECVGKMNVLQQLFEATVAKN CHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLDQKLNAARLMLDAQRDRWGALGQTADLKSSALLNKVLPLLRTLLGADGALFGTSPDLS HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC SFSSPTSLTVTGDPSDDGAGAFVFKLWGGHEEATRLPVLDLLSELTSPRKDPAQIDDLSA CCCCCCEEEEECCCCCCCCCEEEEEEECCCCHHHCCCHHHHHHHHCCCCCCCCHHHHHHH LLIPLVDSTRAKSAPEFNAEDLISDYSNVEKQLRLAASRLCAYERKLNPNPIASLQRVVL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LAALSVFRHGATRAHERAGGPERFLLLDASGDHYSAVAQASTGCVTQLINDACRYMASVV HHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH NDLLTSQIANWPVEPIAAINSLLESSGQAPLEPNSPLSRRITDIVKDFDDPEDIRREVAE HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH ELIRQVEGNQRRGLDGYLRLLGIRSGFLYPTQKNPNKRLNPTDRTLEVLVASTVDVHGPI HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH LEYRDFLEELKTRWAIVVGGRTEDALILSHVGASVPAKALRENSERFLSRLESLGLARRL HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHH ADSVAVVGLLEATHE HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA