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The map label for this gene is ugpQ [H]

Identifier: 186474989

GI number: 186474989

Start: 243038

End: 243802

Strand: Direct

Name: ugpQ [H]

Synonym: Bphy_0220

Alternate gene names: 186474989

Gene position: 243038-243802 (Clockwise)

Preceding gene: 186474987

Following gene: 186474990

Centisome position: 6.99

GC content: 63.66

Gene sequence:

>765_bases
ATGGGCAATGGGATCGATCAGGCATTATCCGCGGACTGGCCATACCCACGGCTCGTCGCGCACCGGATCGGCGGCAAGCT
CGCGCCGGAGAACACGCTCGCGGGCTTCGAGATGTGCGCGCGTTTCGGCTACGGGATGATCGAATTCGACGCGAAGCTTT
CTTCCGATAACCAGATCTTTCTGCTGCACGACGACGACCTCGACCGTACGACGAATGGCCGCGGCGCCGCAGCAGATCAC
ACATGGCAACAGCTTGCCTCGCTCGATGCCGGCGCATGGTTCGATGATCGCTTCAAGGACGAACGGCTGCCCACCCTTGC
GCAAGTCGCCGCACGCTGCGCCAGCGAAGCGATTGCAGCCAACATCGAAATCAAGCCCTGTCCCGGCCGCGATGAAATCA
CGGGGCGGCTCGTCGCGCTTGCCGCGAAGGATCTGTGGCGCAAGCAGAAGCCGCTTCTCTCATCCTTCTCGTTCGAGGCA
CTGAAGGCCGCGCGCGACGCTGCGCCCTCGCTGCCGCGCGGCATGTTGTTCGAGGCGCTGCCCGACGACTGGCTGTCCAT
CGTGCGCGAACTCGCGTGCGTGTCGCTGCATGCCGATCACAAGCACCTGACTCAAACGAACGTCCGCGCGATCCGCGATG
CCGGCTTGCGCGTGCTTGCGTACACGGTGAACGATCCGGCGCGCGCACGCGAACTCGCAAAGTGGGGCGTTGACATGATT
TGTACCGATCGCCTCGATATGATCGGCGCAGACGTCGTGGCCTGA

Upstream 100 bases:

>100_bases
GACCATCCTTTCGCGATCCTCAGAATAAGATAGAACAGGAGTATTGCGCGCTGTCGAATGCTGGCGGCAGTTCCATCAGA
TCTTTGTGAAGGCAAGCACG

Downstream 100 bases:

>100_bases
ACGAAAAACGTGCCCGCACACGCAGACAAAGAAAGACGTCGAAAGGCAGTTTTCCTAACGTAGCAATCTTCGGCAAAGGA
TGAGAACACTATGAAACCGA

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MGNGIDQALSADWPYPRLVAHRIGGKLAPENTLAGFEMCARFGYGMIEFDAKLSSDNQIFLLHDDDLDRTTNGRGAAADH
TWQQLASLDAGAWFDDRFKDERLPTLAQVAARCASEAIAANIEIKPCPGRDEITGRLVALAAKDLWRKQKPLLSSFSFEA
LKAARDAAPSLPRGMLFEALPDDWLSIVRELACVSLHADHKHLTQTNVRAIRDAGLRVLAYTVNDPARARELAKWGVDMI
CTDRLDMIGADVVA

Sequences:

>Translated_254_residues
MGNGIDQALSADWPYPRLVAHRIGGKLAPENTLAGFEMCARFGYGMIEFDAKLSSDNQIFLLHDDDLDRTTNGRGAAADH
TWQQLASLDAGAWFDDRFKDERLPTLAQVAARCASEAIAANIEIKPCPGRDEITGRLVALAAKDLWRKQKPLLSSFSFEA
LKAARDAAPSLPRGMLFEALPDDWLSIVRELACVSLHADHKHLTQTNVRAIRDAGLRVLAYTVNDPARARELAKWGVDMI
CTDRLDMIGADVVA
>Mature_253_residues
GNGIDQALSADWPYPRLVAHRIGGKLAPENTLAGFEMCARFGYGMIEFDAKLSSDNQIFLLHDDDLDRTTNGRGAAADHT
WQQLASLDAGAWFDDRFKDERLPTLAQVAARCASEAIAANIEIKPCPGRDEITGRLVALAAKDLWRKQKPLLSSFSFEAL
KAARDAAPSLPRGMLFEALPDDWLSIVRELACVSLHADHKHLTQTNVRAIRDAGLRVLAYTVNDPARARELAKWGVDMIC
TDRLDMIGADVVA

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=109, Percent_Identity=37.6146788990826, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI33457301, Length=269, Percent_Identity=24.1635687732342, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI284055245, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI284055240, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI284055242, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI21361649, Length=92, Percent_Identity=41.304347826087, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1789858, Length=245, Percent_Identity=56.3265306122449, Blast_Score=291, Evalue=3e-80,
Organism=Caenorhabditis elegans, GI17542344, Length=258, Percent_Identity=26.7441860465116, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27926; Mature: 27795

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNGIDQALSADWPYPRLVAHRIGGKLAPENTLAGFEMCARFGYGMIEFDAKLSSDNQIF
CCCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECEECCCCEEE
LLHDDDLDRTTNGRGAAADHTWQQLASLDAGAWFDDRFKDERLPTLAQVAARCASEAIAA
EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
NIEIKPCPGRDEITGRLVALAAKDLWRKQKPLLSSFSFEALKAARDAAPSLPRGMLFEAL
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHC
PDDWLSIVRELACVSLHADHKHLTQTNVRAIRDAGLRVLAYTVNDPARARELAKWGVDMI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEE
CTDRLDMIGADVVA
EHHHHHHHHHHHCC
>Mature Secondary Structure 
GNGIDQALSADWPYPRLVAHRIGGKLAPENTLAGFEMCARFGYGMIEFDAKLSSDNQIF
CCCHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEECEECCCCEEE
LLHDDDLDRTTNGRGAAADHTWQQLASLDAGAWFDDRFKDERLPTLAQVAARCASEAIAA
EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHC
NIEIKPCPGRDEITGRLVALAAKDLWRKQKPLLSSFSFEALKAARDAAPSLPRGMLFEAL
CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHC
PDDWLSIVRELACVSLHADHKHLTQTNVRAIRDAGLRVLAYTVNDPARARELAKWGVDMI
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCEE
CTDRLDMIGADVVA
EHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]