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The map label for this gene is ydfM [H]

Identifier: 186474887

GI number: 186474887

Start: 126957

End: 128159

Strand: Direct

Name: ydfM [H]

Synonym: Bphy_0117

Alternate gene names: 186474887

Gene position: 126957-128159 (Clockwise)

Preceding gene: 186474886

Following gene: 186474891

Centisome position: 3.65

GC content: 63.26

Gene sequence:

>1203_bases
ATGTCTTCCACCCTGGCGGCCCAGTCCGCGGAAAAACAGCGCGTCGCACGAACAAGCACTTTCGCGAGCATCGCACTTAA
TACGGTGCTGATGTCGATGCAGATCGTGATCGGCGTGTTTGCACATTCTCAGGCGCTCGTCGCCGACGGCGTGCATTCGC
TCGCCGATCTCGTTTCCGATTTTGTCGTGCTGATCGCCAATCGGCATAGTGCGGCGGAGCCGGACGCGGATCATAACTAC
GGGCATAGCCGTTACGAAACGGTCGCTTCGCTATTTCTGGGCGGTCTGCTGATTTCGGTCGGCGTGGGGATGCTGTGGCG
GGCCGGTGCACGGCTCTCCGACATGCAGAACATTCCCGCCGTGCATCTGAGCGCACTGGCGGTGGCGATCGTCGTGCTGC
TGTCGAAGGAAGGGCTCTTTCGTTACATGCTGCGCGAAGCGCAGCGCGTGCGCTCGGCGATGCTGATTGCGAACGCGTGG
CACGCTCGCTCGGACGCGGCGTCGTCGCTTGTGGTGGCGCTGGGTATTCTCGGAAGCATCGCGGGGGTGCGCCTGCTCGA
TCCCATAGCGGCTGCGATCGTCGGCTTCATGGTTGCGCGTATGGGCTGGACGTTCGGCTGGGATGCGCTGCAGGATCTGT
CCGATCGCGCGCTGAACGAAGCCGACACGGCCGATCTGCGCTCACGCATCATGTCGACGCCTGGCGTGCGCGATGTCCAC
GAATTGCGCACGCGGAAAATGGGCGACTTTGCATTGGTCGACGCGCATATTCTCGTGGACCCGATGATCTCGGTTTCCGA
AGGACACTACATCGCGGAGACGGCGCGCTCGCGCGTACTGTCGGACAGCCGCGTGCTCGACGCGCTGATTCACGTGGACC
CGGAGAACGATGCGATTTCGCGGCCGCCCGTCAACCTGCCGCCGCGTGCAAAGATCGTCGCAGAAGTCGATACGGCGCTT
GCTGCCCAAGGGCTCACGGCGGCCAGTGTGAATCTGCATTATCTGAGCACGGGGCTCGACATCGAAGTGACGTTGCAGCC
GTCCAGGCTCGGCGCGCTGGAAAGCGAAGTGCATCAACTCGAGCGTATCGATCTGGAAGCTCTGAAGCTCAGACTGGGCG
CGCGCCGCTTGAGCGTGACGCATGCCGTCGATGTGTCGACGGCCGGCGCGGAACTGGCGCGCGAGCCGCGCGGCGATGCA
TGA

Upstream 100 bases:

>100_bases
TTATGATAAGCACCTGATTTAAAAGCTTTTTTTGATCGCTTAACAGCGGATTCACGAAGCCGCGGGTAGAATTAATGGCA
CCCAACCCGTTTCCCTTCCA

Downstream 100 bases:

>100_bases
GGGAGCGGCTTAAAGCGGCAACTGCGTGTCGAACTTGATTTCGCGCAGCACGACGCTGGTGCGCACCTGCGCGACGGCGG
GAATCTTGAAGATGCGGTCG

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSSTLAAQSAEKQRVARTSTFASIALNTVLMSMQIVIGVFAHSQALVADGVHSLADLVSDFVVLIANRHSAAEPDADHNY
GHSRYETVASLFLGGLLISVGVGMLWRAGARLSDMQNIPAVHLSALAVAIVVLLSKEGLFRYMLREAQRVRSAMLIANAW
HARSDAASSLVVALGILGSIAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRALNEADTADLRSRIMSTPGVRDVH
ELRTRKMGDFALVDAHILVDPMISVSEGHYIAETARSRVLSDSRVLDALIHVDPENDAISRPPVNLPPRAKIVAEVDTAL
AAQGLTAASVNLHYLSTGLDIEVTLQPSRLGALESEVHQLERIDLEALKLRLGARRLSVTHAVDVSTAGAELAREPRGDA

Sequences:

>Translated_400_residues
MSSTLAAQSAEKQRVARTSTFASIALNTVLMSMQIVIGVFAHSQALVADGVHSLADLVSDFVVLIANRHSAAEPDADHNY
GHSRYETVASLFLGGLLISVGVGMLWRAGARLSDMQNIPAVHLSALAVAIVVLLSKEGLFRYMLREAQRVRSAMLIANAW
HARSDAASSLVVALGILGSIAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRALNEADTADLRSRIMSTPGVRDVH
ELRTRKMGDFALVDAHILVDPMISVSEGHYIAETARSRVLSDSRVLDALIHVDPENDAISRPPVNLPPRAKIVAEVDTAL
AAQGLTAASVNLHYLSTGLDIEVTLQPSRLGALESEVHQLERIDLEALKLRLGARRLSVTHAVDVSTAGAELAREPRGDA
>Mature_399_residues
SSTLAAQSAEKQRVARTSTFASIALNTVLMSMQIVIGVFAHSQALVADGVHSLADLVSDFVVLIANRHSAAEPDADHNYG
HSRYETVASLFLGGLLISVGVGMLWRAGARLSDMQNIPAVHLSALAVAIVVLLSKEGLFRYMLREAQRVRSAMLIANAWH
ARSDAASSLVVALGILGSIAGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRALNEADTADLRSRIMSTPGVRDVHE
LRTRKMGDFALVDAHILVDPMISVSEGHYIAETARSRVLSDSRVLDALIHVDPENDAISRPPVNLPPRAKIVAEVDTALA
AQGLTAASVNLHYLSTGLDIEVTLQPSRLGALESEVHQLERIDLEALKLRLGARRLSVTHAVDVSTAGAELAREPRGDA

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=278, Percent_Identity=26.2589928057554, Blast_Score=84, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=243, Percent_Identity=28.8065843621399, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323831, Length=226, Percent_Identity=27.8761061946903, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 42853; Mature: 42722

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTLAAQSAEKQRVARTSTFASIALNTVLMSMQIVIGVFAHSQALVADGVHSLADLVSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FVVLIANRHSAAEPDADHNYGHSRYETVASLFLGGLLISVGVGMLWRAGARLSDMQNIPA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCH
VHLSALAVAIVVLLSKEGLFRYMLREAQRVRSAMLIANAWHARSDAASSLVVALGILGSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRALNEADTADLRSRIMSTPGVRDVH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
ELRTRKMGDFALVDAHILVDPMISVSEGHYIAETARSRVLSDSRVLDALIHVDPENDAIS
HHHHHCCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
RPPVNLPPRAKIVAEVDTALAAQGLTAASVNLHYLSTGLDIEVTLQPSRLGALESEVHQL
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHH
ERIDLEALKLRLGARRLSVTHAVDVSTAGAELAREPRGDA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
SSTLAAQSAEKQRVARTSTFASIALNTVLMSMQIVIGVFAHSQALVADGVHSLADLVSD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FVVLIANRHSAAEPDADHNYGHSRYETVASLFLGGLLISVGVGMLWRAGARLSDMQNIPA
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCH
VHLSALAVAIVVLLSKEGLFRYMLREAQRVRSAMLIANAWHARSDAASSLVVALGILGSI
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
AGVRLLDPIAAAIVGFMVARMGWTFGWDALQDLSDRALNEADTADLRSRIMSTPGVRDVH
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
ELRTRKMGDFALVDAHILVDPMISVSEGHYIAETARSRVLSDSRVLDALIHVDPENDAIS
HHHHHCCCCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC
RPPVNLPPRAKIVAEVDTALAAQGLTAASVNLHYLSTGLDIEVTLQPSRLGALESEVHQL
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEEECHHHHHHHHHHHHHH
ERIDLEALKLRLGARRLSVTHAVDVSTAGAELAREPRGDA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]