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The map label for this gene is 186474886

Identifier: 186474886

GI number: 186474886

Start: 126407

End: 126709

Strand: Direct

Name: 186474886

Synonym: Bphy_0116

Alternate gene names: NA

Gene position: 126407-126709 (Clockwise)

Preceding gene: 186474885

Following gene: 186474887

Centisome position: 3.63

GC content: 57.76

Gene sequence:

>303_bases
ATGTCCTCCTACAGGGAACTACTTGCGCAGCGCGAAAAGCTCGAAAAGCAGATCGAAGAGGCGAAAGCGCGCGAGTATGC
GGAAGTGTTAAACGAGATCAAGCAGAAAATGGCTGATTACGGCATTACGCTGGCCGAACTCGGTGGCTCACGTGCGAAAG
CCGTCAAGACAGCGGGCCGTCCCCGAGCTGGCGTTGCGCCGAAATATCGCGATCCCGCGAGCGGCAGCACCTGGTCGGGT
CGCGGTAAGCCACCCCGCTGGATTGCAGGCCAGGAGCGGGAAAAATTTCTCATCGAGAAATAA

Upstream 100 bases:

>100_bases
CTATTTTGTGTTAATCTCGCCACCAAATTCCGAGGCATGACAACTTTCCGGACTAAATCGGCATAGACCGTCCGTCCATT
TATCGAACCAGAAGGAAACT

Downstream 100 bases:

>100_bases
TATGACTTAATGCTTGCACCGCGCGAGCAATGTGTTAAAGAAAACCGCGCCCACATCGAGAGGCGCGGTTTTTTTATTGG
TCATCGGCTTATCTTTGGAC

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; Nucleoid Protein H-NS; H-NS-Like Proteins; HNS-Like Transcriptional Regulator; H-NS Histone-Like Protein; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MSSYRELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGSRAKAVKTAGRPRAGVAPKYRDPASGSTWSG
RGKPPRWIAGQEREKFLIEK

Sequences:

>Translated_100_residues
MSSYRELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGSRAKAVKTAGRPRAGVAPKYRDPASGSTWSG
RGKPPRWIAGQEREKFLIEK
>Mature_99_residues
SSYRELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGSRAKAVKTAGRPRAGVAPKYRDPASGSTWSGR
GKPPRWIAGQEREKFLIEK

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11235; Mature: 11104

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYRELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGSRAKAVKTAGR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCC
PRAGVAPKYRDPASGSTWSGRGKPPRWIAGQEREKFLIEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SSYRELLAQREKLEKQIEEAKAREYAEVLNEIKQKMADYGITLAELGGSRAKAVKTAGR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHCCC
PRAGVAPKYRDPASGSTWSGRGKPPRWIAGQEREKFLIEK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA