| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186474885
Identifier: 186474885
GI number: 186474885
Start: 125383
End: 126048
Strand: Direct
Name: 186474885
Synonym: Bphy_0115
Alternate gene names: NA
Gene position: 125383-126048 (Clockwise)
Preceding gene: 186474883
Following gene: 186474886
Centisome position: 3.6
GC content: 63.81
Gene sequence:
>666_bases TTGAACATTCCCGCTCACGCTCCGCTGCATCTGCTGCATCAGGCCGCCATCGGCACGCTCGCCACGCATGCGCGCCAGCC GCGAGGTTTCCCGTATCCGACCGTGCTGCCATTCGCGCCTGACGCGCGGCATCGGCCGACGATTCTTGTGAGCCGTCTCG CCGAACACACGCGCAACCTGCACTCCGATCCGCGCTCGGGCTTCTTGATCGTCCATGCGCCGGACGGCGATGTGCTCAAT GGCGAGCGCGTCACGCTGGTCGGCACGTTCGAGCACGTCCAGCCGACCCCGGAAGTAACTCATCGCTACTTGCGCTATCA CCCCTCTGCCGAACGCTACCTCGTGCTGGGCGATTTTTCTTTCTGGGTGATGTCGATCGAGCGGATGCGCTATATCGGCG GGTTTGGCGCGATGGGCTGGCTGATGGCGGAGGACCTCGATCCGCTCGCGCCCGTTTCGTTCGAAGAGGAAAGCGCGCTG GCCGACATGATCGAGCGGCATCCGCGGCGTCCTGCGCATGTTCGACTACTGGGAGTCGACAGGTATGGCGCAGACCTGGT GACGTCGGGTAGCCGAAAGCGCGTCGCGTTCGACACGCCAGCTCCCGATTGGGAATCGCTCCGCGCACTTCTTGAAGATT GCATTGCCCGGCAGGGACCTGCTTAA
Upstream 100 bases:
>100_bases TTCCACGCGCGGCGCGTCGCCCGTTCTGATCAGGATCGATGTCGGCCTCGTCGATCCACGGGCATTGCGCAGCGCGAATT CATCCGACGAGGACGCGAAC
Downstream 100 bases:
>100_bases GACTCACGTGCAAGGTCGTTTTACCGGATAAAAGGGCTGAGCTTTACAGTTTGCCGGTTGAAACTCGCATCGCATGAAAT GTTCTGGAATAAATTAGCCA
Product: pyridoxamine 5'-phosphate oxidase-like protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Heme Iron Utilization Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxamine 5prime-Phosphate Oxidase-Related Protein; FMN Flavoprotein; Pyridoxamine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Related
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MNIPAHAPLHLLHQAAIGTLATHARQPRGFPYPTVLPFAPDARHRPTILVSRLAEHTRNLHSDPRSGFLIVHAPDGDVLN GERVTLVGTFEHVQPTPEVTHRYLRYHPSAERYLVLGDFSFWVMSIERMRYIGGFGAMGWLMAEDLDPLAPVSFEEESAL ADMIERHPRRPAHVRLLGVDRYGADLVTSGSRKRVAFDTPAPDWESLRALLEDCIARQGPA
Sequences:
>Translated_221_residues MNIPAHAPLHLLHQAAIGTLATHARQPRGFPYPTVLPFAPDARHRPTILVSRLAEHTRNLHSDPRSGFLIVHAPDGDVLN GERVTLVGTFEHVQPTPEVTHRYLRYHPSAERYLVLGDFSFWVMSIERMRYIGGFGAMGWLMAEDLDPLAPVSFEEESAL ADMIERHPRRPAHVRLLGVDRYGADLVTSGSRKRVAFDTPAPDWESLRALLEDCIARQGPA >Mature_221_residues MNIPAHAPLHLLHQAAIGTLATHARQPRGFPYPTVLPFAPDARHRPTILVSRLAEHTRNLHSDPRSGFLIVHAPDGDVLN GERVTLVGTFEHVQPTPEVTHRYLRYHPSAERYLVLGDFSFWVMSIERMRYIGGFGAMGWLMAEDLDPLAPVSFEEESAL ADMIERHPRRPAHVRLLGVDRYGADLVTSGSRKRVAFDTPAPDWESLRALLEDCIARQGPA
Specific function: Unknown
COG id: COG0748
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24759; Mature: 24759
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPAHAPLHLLHQAAIGTLATHARQPRGFPYPTVLPFAPDARHRPTILVSRLAEHTRNL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHH HSDPRSGFLIVHAPDGDVLNGERVTLVGTFEHVQPTPEVTHRYLRYHPSAERYLVLGDFS CCCCCCCEEEEECCCCCEECCCEEEEEEEHHHCCCCHHHHHHHHHCCCCCCEEEEEECHH FWVMSIERMRYIGGFGAMGWLMAEDLDPLAPVSFEEESALADMIERHPRRPAHVRLLGVD HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC RYGADLVTSGSRKRVAFDTPAPDWESLRALLEDCIARQGPA CCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIPAHAPLHLLHQAAIGTLATHARQPRGFPYPTVLPFAPDARHRPTILVSRLAEHTRNL CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHH HSDPRSGFLIVHAPDGDVLNGERVTLVGTFEHVQPTPEVTHRYLRYHPSAERYLVLGDFS CCCCCCCEEEEECCCCCEECCCEEEEEEEHHHCCCCHHHHHHHHHCCCCCCEEEEEECHH FWVMSIERMRYIGGFGAMGWLMAEDLDPLAPVSFEEESALADMIERHPRRPAHVRLLGVD HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEC RYGADLVTSGSRKRVAFDTPAPDWESLRALLEDCIARQGPA CCCCHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA