| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is dbpA [H]
Identifier: 186474785
GI number: 186474785
Start: 15034
End: 16425
Strand: Direct
Name: dbpA [H]
Synonym: Bphy_0013
Alternate gene names: 186474785
Gene position: 15034-16425 (Clockwise)
Preceding gene: 186474784
Following gene: 186474786
Centisome position: 0.43
GC content: 64.37
Gene sequence:
>1392_bases ATGACAACCCAGGCAAGACCCTTTAGCGAACTGCCGCTCTCGCAGGCGGTGCTCGCAAATCTCACGCAACTCGGCTATGC CGATATGACGCCCATCCAGGCCGCCAGCCTGCCCATCGCACTCGCCGGTCACGATCTGATCGCGCAGGCGAAGACGGGCA GCGGCAAGACGGCGGCGTTCTCGCTGGCGCTGCTGGCGAGACTCGATGCACGGCGTTACGCGGTGCAGGCGATGGTGCTG TGCCCGACGCGCGAACTCGCCGATCAGGTCACGCAGGAAATTCGCCGCCTCGCGCGCGCCGAAGAGAACATCAAGGTGCT GACGCTGTGCGGCGGCACGCCCATGCGTCCGCAGACAGCGAGTCTCGAGCATGGCGCGCATATCGTCGTCGGCACGCCGG GGCGCATCATGGATCACCTGGAGCGCGGCAGCCTGTCGCTCGACGCGCTCAATACGCTCGTGCTCGACGAAGCGGACCGC ATGCTCGACATGGGCTTCTTCGACGACATCGCCAAGGTCGCGCGTCAATGCCCGAAGGAGCGCCAGACGCTGCTGTTCTC AGCGACCTATCCCGAAGGCATCGCGAAGCTGAGCCAGCAGTTTCTGCGCAACCCGAAGGAGGTGAAGCTCGAAGAGCGCC ACGACGACAGCAAGATCCGCCAGCGCTTTTACGAAGTGACGGAAGACGAGCGCTTGCATGCCGTCGGCCAGCTGCTGAAC CATTACCGCCCGGTGAGCACGATCGCGTTTTGCAACACGAAGAACCAGTGCCGCGATCTGCTCGACGTGCTGTGCGCGCA AGGTTTTCATGCGCTGGCGCTGCATGGCGAACTCGATCAGCGCGAACGCGACCAGGTGCTGATCCAGTTCGCGAATCGCA GCTGCTCGGTGCTGGTCGCCACCGATGTCGCCGCACGCGGCCTGGATATCGCGCAGCTCGAAGCGGTAATCAACGTCGAC GTGACGCCTGATCCGGAAGTGCACGTGCATCGCATCGGCCGCACGGGCCGCGCGGATCAGGAAGGCTGGGCGCTGAGCCT GGCGAGCATGAACGAGATGGGGCGCGTAGGCGCCATCGAAGAGGCGCAAGGGCGCGACGTCGAATGGCATCCGCTCGCCG AACTGAACGCCGCGAGCGACGAACCGCTGCTGCCGCCAATGGAAACGCTGCAGATTCTCGGCGGCCGCAAGGAGAAGATC CGTCCCGGCGACGTGCTCGGTGCGCTGACGGGCGACGCCGGTTTCAACGGCTCGCAGATCGGCAAGATCAATGTGACGGA GTTCTCGACGTACGTCGCCGTCGAGCGCGGCATTGCACGCGATGCGCTGCGCAAACTGAACGCGGGCAAGATCAAGGGCA AGAAGGTCAAAGTGCGTTTGATGGACGAGTGA
Upstream 100 bases:
>100_bases GCGGCGCACGCAACTACGTCGAGCGATTCGATGCCGACGACGGCACGATCGTTTATGAGCAGATCGAAGGTCGCCCGTAC AACTAAGGCCGCACACCGAC
Downstream 100 bases:
>100_bases CGCGCACAATGACGAGGCGGTCGCACACATCGCCTCGCTCGTCGTTCTTCATACGGGTGAAATGCGAAAACGGGCAGGCA TCACTCGTTTTCATACCGGC
Product: ATP-dependent RNA helicase DbpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRYAVQAMVL CPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADR MLDMGFFDDIAKVARQCPKERQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLN HYRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVINVD VTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIEEAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKI RPGDVLGALTGDAGFNGSQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE
Sequences:
>Translated_463_residues MTTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRYAVQAMVL CPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADR MLDMGFFDDIAKVARQCPKERQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLN HYRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVINVD VTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIEEAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKI RPGDVLGALTGDAGFNGSQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE >Mature_462_residues TTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAFSLALLARLDARRYAVQAMVLC PTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTASLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADRM LDMGFFDDIAKVARQCPKERQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLNH YRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVATDVAARGLDIAQLEAVINVDV TPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIEEAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKIR PGDVLGALTGDAGFNGSQIGKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE
Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI164664518, Length=370, Percent_Identity=34.5945945945946, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=37.9888268156425, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=37.9888268156425, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=36.7688022284123, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI148613856, Length=350, Percent_Identity=38.2857142857143, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI38201710, Length=350, Percent_Identity=38.2857142857143, Blast_Score=228, Evalue=8e-60, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=37.9213483146067, Blast_Score=227, Evalue=2e-59, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=37.9213483146067, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=37.9213483146067, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=37.9213483146067, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI20149629, Length=370, Percent_Identity=34.0540540540541, Blast_Score=224, Evalue=9e-59, Organism=Homo sapiens, GI87196351, Length=364, Percent_Identity=38.7362637362637, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI301171475, Length=364, Percent_Identity=38.7362637362637, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI301171467, Length=364, Percent_Identity=38.7362637362637, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=36.9747899159664, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=32.7913279132791, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=36.5333333333333, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=37.2972972972973, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=37.2972972972973, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI224593278, Length=353, Percent_Identity=38.5269121813031, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI50659095, Length=374, Percent_Identity=34.7593582887701, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=34.5646437994723, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.9550561797753, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=33.9425587467363, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=33.9673913043478, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=33.7142857142857, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI51094101, Length=351, Percent_Identity=34.4729344729345, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI164419743, Length=351, Percent_Identity=34.4729344729345, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI83700235, Length=327, Percent_Identity=35.1681957186544, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI4758112, Length=356, Percent_Identity=30.8988764044944, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI18375623, Length=356, Percent_Identity=30.8988764044944, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI21040371, Length=349, Percent_Identity=31.8051575931232, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI13514831, Length=348, Percent_Identity=34.4827586206897, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI256223453, Length=340, Percent_Identity=32.3529411764706, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=34.1040462427746, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI41327776, Length=369, Percent_Identity=30.8943089430894, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=32.6815642458101, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI8922886, Length=368, Percent_Identity=32.3369565217391, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=32.5814536340852, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=31.5649867374005, Blast_Score=179, Evalue=6e-45, Organism=Homo sapiens, GI38327634, Length=379, Percent_Identity=30.0791556728232, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI55749865, Length=361, Percent_Identity=30.1939058171745, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI164419732, Length=352, Percent_Identity=32.6704545454545, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI62241022, Length=359, Percent_Identity=31.7548746518106, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI62241024, Length=328, Percent_Identity=32.3170731707317, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=31.9402985074627, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=27.3775216138329, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=27.3775216138329, Blast_Score=140, Evalue=4e-33, Organism=Homo sapiens, GI17505907, Length=221, Percent_Identity=36.1990950226244, Blast_Score=123, Evalue=3e-28, Organism=Homo sapiens, GI9966805, Length=307, Percent_Identity=34.2019543973941, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI20336298, Length=221, Percent_Identity=35.7466063348416, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI256773275, Length=370, Percent_Identity=29.7297297297297, Blast_Score=119, Evalue=8e-27, Organism=Homo sapiens, GI154759257, Length=445, Percent_Identity=27.6404494382022, Blast_Score=118, Evalue=1e-26, Organism=Escherichia coli, GI1787605, Length=456, Percent_Identity=53.7280701754386, Blast_Score=464, Evalue=1e-132, Organism=Escherichia coli, GI87082221, Length=349, Percent_Identity=42.1203438395415, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI1787016, Length=367, Percent_Identity=39.2370572207085, Blast_Score=251, Evalue=7e-68, Organism=Escherichia coli, GI1790214, Length=379, Percent_Identity=35.6200527704486, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1788930, Length=352, Percent_Identity=36.9318181818182, Blast_Score=179, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=35.8695652173913, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI17555296, Length=371, Percent_Identity=36.6576819407008, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17552114, Length=359, Percent_Identity=33.1476323119777, Blast_Score=227, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=33.0623306233062, Blast_Score=225, Evalue=5e-59, Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=33.0623306233062, Blast_Score=224, Evalue=6e-59, Organism=Caenorhabditis elegans, GI115533224, Length=353, Percent_Identity=39.3767705382436, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=36.3395225464191, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=39.5027624309392, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=39.5027624309392, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=39.5027624309392, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI71995718, Length=364, Percent_Identity=37.9120879120879, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17552642, Length=362, Percent_Identity=36.4640883977901, Blast_Score=208, Evalue=6e-54, Organism=Caenorhabditis elegans, GI17507877, Length=399, Percent_Identity=35.3383458646617, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=34.4827586206897, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=35.8288770053476, Blast_Score=204, Evalue=1e-52, Organism=Caenorhabditis elegans, GI86570094, Length=338, Percent_Identity=38.4615384615385, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI71999646, Length=388, Percent_Identity=31.9587628865979, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=33.048433048433, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=31.6622691292876, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI115532548, Length=379, Percent_Identity=31.6622691292876, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=32.8767123287671, Blast_Score=194, Evalue=7e-50, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=33.8028169014084, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71982858, Length=349, Percent_Identity=30.6590257879656, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=33.1550802139037, Blast_Score=188, Evalue=6e-48, Organism=Caenorhabditis elegans, GI17507945, Length=355, Percent_Identity=35.7746478873239, Blast_Score=188, Evalue=7e-48, Organism=Caenorhabditis elegans, GI193206561, Length=345, Percent_Identity=31.0144927536232, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17505370, Length=383, Percent_Identity=31.331592689295, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=32.5459317585302, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=32.5459317585302, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17536103, Length=367, Percent_Identity=32.9700272479564, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17553716, Length=365, Percent_Identity=28.2191780821918, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193208216, Length=363, Percent_Identity=30.8539944903581, Blast_Score=145, Evalue=6e-35, Organism=Caenorhabditis elegans, GI17507641, Length=385, Percent_Identity=31.9480519480519, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17556951, Length=381, Percent_Identity=27.2965879265092, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=24.6913580246914, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=28.3854166666667, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=30.7277628032345, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=31.6353887399464, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71982862, Length=199, Percent_Identity=32.1608040201005, Blast_Score=124, Evalue=8e-29, Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=28.5326086956522, Blast_Score=115, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71997889, Length=374, Percent_Identity=28.0748663101604, Blast_Score=115, Evalue=6e-26, Organism=Caenorhabditis elegans, GI25148205, Length=328, Percent_Identity=24.390243902439, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71987152, Length=103, Percent_Identity=37.8640776699029, Blast_Score=82, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=38.0952380952381, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6325138, Length=374, Percent_Identity=38.5026737967914, Blast_Score=230, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6323021, Length=394, Percent_Identity=36.0406091370558, Blast_Score=227, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6320041, Length=367, Percent_Identity=32.6975476839237, Blast_Score=226, Evalue=9e-60, Organism=Saccharomyces cerevisiae, GI6321856, Length=363, Percent_Identity=38.5674931129477, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324778, Length=374, Percent_Identity=37.1657754010695, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=35.8126721763085, Blast_Score=213, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6320224, Length=381, Percent_Identity=31.496062992126, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6322912, Length=368, Percent_Identity=33.695652173913, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6322323, Length=368, Percent_Identity=33.695652173913, Blast_Score=202, Evalue=6e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=364, Percent_Identity=33.7912087912088, Blast_Score=196, Evalue=9e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=367, Percent_Identity=33.2425068119891, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320119, Length=354, Percent_Identity=30.5084745762712, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=376, Percent_Identity=31.6489361702128, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=434, Percent_Identity=29.2626728110599, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321111, Length=390, Percent_Identity=30.7692307692308, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6321963, Length=369, Percent_Identity=34.1463414634146, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=31.5642458100559, Blast_Score=174, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6319618, Length=473, Percent_Identity=29.1754756871036, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=412, Percent_Identity=28.3980582524272, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=341, Percent_Identity=28.4457478005865, Blast_Score=139, Evalue=7e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=418, Percent_Identity=27.2727272727273, Blast_Score=136, Evalue=6e-33, Organism=Saccharomyces cerevisiae, GI6320173, Length=207, Percent_Identity=35.7487922705314, Blast_Score=132, Evalue=8e-32, Organism=Saccharomyces cerevisiae, GI6322876, Length=491, Percent_Identity=25.6619144602851, Blast_Score=125, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324366, Length=357, Percent_Identity=25.4901960784314, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=377, Percent_Identity=22.5464190981432, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=40.5099150141643, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=38.5057471264368, Blast_Score=230, Evalue=1e-60, Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=37.883008356546, Blast_Score=230, Evalue=2e-60, Organism=Drosophila melanogaster, GI24644483, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644487, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI45551833, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644485, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI281361218, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644481, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24644479, Length=366, Percent_Identity=36.3387978142077, Blast_Score=223, Evalue=3e-58, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=33.6043360433604, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=31.9783197831978, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=31.9783197831978, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI24585582, Length=375, Percent_Identity=34.6666666666667, Blast_Score=218, Evalue=5e-57, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=36.7231638418079, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=36.1581920903955, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=38.268156424581, Blast_Score=215, Evalue=6e-56, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=36.8, Blast_Score=210, Evalue=2e-54, Organism=Drosophila melanogaster, GI24642151, Length=364, Percent_Identity=35.4395604395604, Blast_Score=208, Evalue=7e-54, Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=37.007874015748, Blast_Score=208, Evalue=8e-54, Organism=Drosophila melanogaster, GI28575014, Length=350, Percent_Identity=34, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI24582080, Length=328, Percent_Identity=35.0609756097561, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24582078, Length=328, Percent_Identity=35.0609756097561, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI17136248, Length=328, Percent_Identity=35.0609756097561, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24582075, Length=328, Percent_Identity=35.0609756097561, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=39.8089171974522, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=32.7225130890052, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24581954, Length=383, Percent_Identity=30.8093994778068, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI24581952, Length=383, Percent_Identity=30.8093994778068, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI24581956, Length=383, Percent_Identity=30.8093994778068, Blast_Score=188, Evalue=7e-48, Organism=Drosophila melanogaster, GI28571808, Length=386, Percent_Identity=30.3108808290155, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI28571809, Length=386, Percent_Identity=30.3108808290155, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI17647335, Length=363, Percent_Identity=31.404958677686, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI21355559, Length=359, Percent_Identity=35.0974930362117, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24642822, Length=392, Percent_Identity=28.5714285714286, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI24643725, Length=401, Percent_Identity=30.1745635910224, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24666101, Length=372, Percent_Identity=30.3763440860215, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=29.8192771084337, Blast_Score=130, Evalue=1e-30, Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=29.7082228116711, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI20130173, Length=362, Percent_Identity=27.9005524861878, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI18859659, Length=200, Percent_Identity=34.5, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI28571338, Length=200, Percent_Identity=34.5, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI17136666, Length=485, Percent_Identity=25.5670103092783, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=22.7011494252874, Blast_Score=88, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50852; Mature: 50721
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAF CCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHHHH SLALLARLDARRYAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTA HHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC SLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADRMLDMGFFDDIAKVARQCPKE CCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH RQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLN HHEEEEECCCCHHHHHHHHHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH HYRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVA CCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEE TDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIE ECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHCCCCCCCC EAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKIRPGDVLGALTGDAGFNGSQI CCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE GKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure TTQARPFSELPLSQAVLANLTQLGYADMTPIQAASLPIALAGHDLIAQAKTGSGKTAAF CCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHCCCCEEEECCHHEEECCCCCCCHHHH SLALLARLDARRYAVQAMVLCPTRELADQVTQEIRRLARAEENIKVLTLCGGTPMRPQTA HHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC SLEHGAHIVVGTPGRIMDHLERGSLSLDALNTLVLDEADRMLDMGFFDDIAKVARQCPKE CCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHH RQTLLFSATYPEGIAKLSQQFLRNPKEVKLEERHDDSKIRQRFYEVTEDERLHAVGQLLN HHEEEEECCCCHHHHHHHHHHHCCCCCEEEHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH HYRPVSTIAFCNTKNQCRDLLDVLCAQGFHALALHGELDQRERDQVLIQFANRSCSVLVA CCCCCCEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEE TDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMNEMGRVGAIE ECHHHCCCCHHHEEEEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHCCCCCCCC EAQGRDVEWHPLAELNAASDEPLLPPMETLQILGGRKEKIRPGDVLGALTGDAGFNGSQI CCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCE GKINVTEFSTYVAVERGIARDALRKLNAGKIKGKKVKVRLMDE EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]