| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is parA [H]
Identifier: 183222813
GI number: 183222813
Start: 3592912
End: 3593673
Strand: Reverse
Name: parA [H]
Synonym: LEPBI_I3474
Alternate gene names: 183222813
Gene position: 3593673-3592912 (Counterclockwise)
Preceding gene: 183222814
Following gene: 183222812
Centisome position: 99.83
GC content: 39.11
Gene sequence:
>762_bases ATGGGTAAAATTGTTTCGATCAGTAACCAAAAAGGTGGTGTTGGAAAAACAACCACAGCGATCAACTTAGCATCCAATCT TGTTGATTTAGGAAAAAAAGTTTTGCTCCTGGATATCGATCCACAAGGAAACTCAGGATCGGGACTTGGCTTGGAAGTGC AGTCACTGAGTAAAACAACTTATGAAGTGATGATCGGTGAACTATCTGCAAGAGAAGCGATCCAAAAAACATTCATACCA AATTTAGATATCATTCCTTCGAACATCAACCTCTCGGGACTAGAAGTAGACTTTCTTGGCATCGAGAAAAAAGAATTCAA ACTGAAAGATGCTCTTGCATCCATCAAAGAATCCTACGATTATATTTTAATCGATTGTCCTCCCTCCCTCGGAGTTTTAA CGATCAATGCACTTTGTGCATCTCAATCAGTCATGATCACTTTACAAACTGAGTACTTTGCATTGGAAGGACTTTCGCAA CTCATGCGAATCATTTCTCTTGTTCAATCACAATGGAATCCATCACTCGCATTAGAAGGAGTGCTTCTGACAATGTATGA CAAACGAACCAACTTAGCAAACCAAGTGGCTGACGATGTGAGAAACTATTTCAAAGAGAAAGTTTATGAGACTGTCATAC CAAGAAACATAAAACTCTCAGAAGCACCTTCGTTTGGAAAACCAATCAACTACTATGATCCTGATGGTGTTGGTGCCAAA AGTTATAAAAGTTTAGCGGAAGAAATTGTAGGGAGGGCATAA
Upstream 100 bases:
>100_bases GTTGGAAAGAGACATATCAAAATACTGCAAAAGAATTCACTTCCAAAAAAGGGATACCCCCGCGACTGGAAGGAAATCGT AAAGGAGACGAAAAGCAAGA
Downstream 100 bases:
>100_bases GTTATGGCACTCGGCAAAGGAAAAGTATTAGGACGAGGACTTGGAAATTTAATTCCAGTCAATGAAAACAATGTAGAGAT TTCGAAAGAGGAACTATCGG
Product: chromosome partitioning protein ParA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIP NLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQ LMRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK SYKSLAEEIVGRA
Sequences:
>Translated_253_residues MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIP NLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQ LMRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK SYKSLAEEIVGRA >Mature_252_residues GKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIPN LDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQL MRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAKS YKSLAEEIVGRA
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 27599; Mature: 27468
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTT CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHHHH YEVMIGELSAREAIQKTFIPNLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYD HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC YILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQLMRIISLVQSQWNPSLALEG EEEEECCCCCCEEEEEHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCE VLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHH SYKSLAEEIVGRA HHHHHHHHHHCCC >Mature Secondary Structure GKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTT CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHHHH YEVMIGELSAREAIQKTFIPNLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYD HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC YILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQLMRIISLVQSQWNPSLALEG EEEEECCCCCCEEEEEHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCE VLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHH SYKSLAEEIVGRA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]