Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is parA [H]

Identifier: 183222813

GI number: 183222813

Start: 3592912

End: 3593673

Strand: Reverse

Name: parA [H]

Synonym: LEPBI_I3474

Alternate gene names: 183222813

Gene position: 3593673-3592912 (Counterclockwise)

Preceding gene: 183222814

Following gene: 183222812

Centisome position: 99.83

GC content: 39.11

Gene sequence:

>762_bases
ATGGGTAAAATTGTTTCGATCAGTAACCAAAAAGGTGGTGTTGGAAAAACAACCACAGCGATCAACTTAGCATCCAATCT
TGTTGATTTAGGAAAAAAAGTTTTGCTCCTGGATATCGATCCACAAGGAAACTCAGGATCGGGACTTGGCTTGGAAGTGC
AGTCACTGAGTAAAACAACTTATGAAGTGATGATCGGTGAACTATCTGCAAGAGAAGCGATCCAAAAAACATTCATACCA
AATTTAGATATCATTCCTTCGAACATCAACCTCTCGGGACTAGAAGTAGACTTTCTTGGCATCGAGAAAAAAGAATTCAA
ACTGAAAGATGCTCTTGCATCCATCAAAGAATCCTACGATTATATTTTAATCGATTGTCCTCCCTCCCTCGGAGTTTTAA
CGATCAATGCACTTTGTGCATCTCAATCAGTCATGATCACTTTACAAACTGAGTACTTTGCATTGGAAGGACTTTCGCAA
CTCATGCGAATCATTTCTCTTGTTCAATCACAATGGAATCCATCACTCGCATTAGAAGGAGTGCTTCTGACAATGTATGA
CAAACGAACCAACTTAGCAAACCAAGTGGCTGACGATGTGAGAAACTATTTCAAAGAGAAAGTTTATGAGACTGTCATAC
CAAGAAACATAAAACTCTCAGAAGCACCTTCGTTTGGAAAACCAATCAACTACTATGATCCTGATGGTGTTGGTGCCAAA
AGTTATAAAAGTTTAGCGGAAGAAATTGTAGGGAGGGCATAA

Upstream 100 bases:

>100_bases
GTTGGAAAGAGACATATCAAAATACTGCAAAAGAATTCACTTCCAAAAAAGGGATACCCCCGCGACTGGAAGGAAATCGT
AAAGGAGACGAAAAGCAAGA

Downstream 100 bases:

>100_bases
GTTATGGCACTCGGCAAAGGAAAAGTATTAGGACGAGGACTTGGAAATTTAATTCCAGTCAATGAAAACAATGTAGAGAT
TTCGAAAGAGGAACTATCGG

Product: chromosome partitioning protein ParA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIP
NLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQ
LMRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK
SYKSLAEEIVGRA

Sequences:

>Translated_253_residues
MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIP
NLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQ
LMRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK
SYKSLAEEIVGRA
>Mature_252_residues
GKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTTYEVMIGELSAREAIQKTFIPN
LDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYDYILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQL
MRIISLVQSQWNPSLALEGVLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAKS
YKSLAEEIVGRA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27599; Mature: 27468

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTT
CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHHHH
YEVMIGELSAREAIQKTFIPNLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYD
HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
YILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQLMRIISLVQSQWNPSLALEG
EEEEECCCCCCEEEEEHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCE
VLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHH
SYKSLAEEIVGRA
HHHHHHHHHHCCC
>Mature Secondary Structure 
GKIVSISNQKGGVGKTTTAINLASNLVDLGKKVLLLDIDPQGNSGSGLGLEVQSLSKTT
CCEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEHHHHHHHH
YEVMIGELSAREAIQKTFIPNLDIIPSNINLSGLEVDFLGIEKKEFKLKDALASIKESYD
HHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
YILIDCPPSLGVLTINALCASQSVMITLQTEYFALEGLSQLMRIISLVQSQWNPSLALEG
EEEEECCCCCCEEEEEHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEECCE
VLLTMYDKRTNLANQVADDVRNYFKEKVYETVIPRNIKLSEAPSFGKPINYYDPDGVGAK
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHH
SYKSLAEEIVGRA
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]