| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222803
Identifier: 183222803
GI number: 183222803
Start: 3582130
End: 3583674
Strand: Reverse
Name: 183222803
Synonym: LEPBI_I3464
Alternate gene names: NA
Gene position: 3583674-3582130 (Counterclockwise)
Preceding gene: 183222804
Following gene: 183222798
Centisome position: 99.56
GC content: 37.09
Gene sequence:
>1545_bases ATGTTAACACGTTTATTTTCTGTTACGATATTAGTTTTGATTCCTTTCTTTTTTCTTTCTGCCCAAGAAGAAGAATCACA GAGAACGATCATGAATTTTAATGGATCGTTTCGTGTGAGAGCAACGAATGTTGGACGTGATGTTTTGTTAGAAAGAAAAA CTCCTGTCACTCCCATCACAAATTTAGAAAAGGAAGAAACTGAAAGAGTCCAATCAGAACAGCAAACAATCCAATCAGAT TTGGAACGTAGGCAACAAGGATTACCCAGTCAAATCACTCGCCGAAAAGAAGATGTGAGTTACTATGATTCTCGTTTTCT TTATAATATGAGTTTTTCGGCAAACAAATATGTGGAAGGTATTTGGGGAATGCAAGTGGGAGATATTCCCTTTGGTGGAC GAGGTCTTAGGGCAACGGGTCCGGATGGATTTGATCCAGGTCTTGTTGGTCCGGGTTCTGGTGGGGAGAGAGGGAGGACA GCAGCAGTCAATGTACAAACAAACCTCCTCTATTTAAATTTTCGAATCCCAGAATCGGGATTATTCATCAAAGTAGGCCA ACAATTATTTAGTTCCGCACAAGGACGGGTTTTATTTTCCACAGGGACTGGTGTTAGTATTTTAAAAAATTTCCAATTCC TTAGATTGTCATTGGAAGGTGGAGTCCTTCGAGCGCGTGATCAAAGTTTTTTGGATGTCGATAAAAACGGATTCGCAGAT AAAAATTATCAAAGTTCAAATATCTATTATAATCGTATGAAGTTTGAATACTTTCGGAACATTCGGAATGAAGTGTATGC CTACTTTTTAGATGATAACGACAAAACCGATAATGAAACAGCAAGACTTGCTTGGTATGGACTCCATAATGAATTCAATT TTCAGAAATTTTCCTTCATTGTGCATGGAATTCTAAATACTGGAATTGTGAAAAAGTTAAATGCTATAAATGACTCCAAT GATGTAACAATTTATAATACAACTCGACGACATTATATCAAAGGTGGTATGTATGATTTCCAATTTACTTATCGCTGGAA TGAGTCTTTAAACTTTAACTTAATTGCTCTTGGTACAACAGGCCGACCTGGTTATGATGAAAATGGACAAGAGGCAAACT TAAAAGGAAATGGATACCGAACTCTTGCTCCAGGATTTTCAATTTCAAACATTGCTACTGACTTTACTGGTGGTTATGCA TTGTTCAATGGATCTAGTTTTTCTGGATTGAATGAATACGGTTTGTACTCCAATATCATTGCCTTTAGTCCTTACCAATT TACGTTCGGTTACTATCAATTATGGGCAACGAAATCGCCTGAAATTCGTATCAATAGAGAATTTAGCGAACGGAATGGTT ATCGAACTTCAACGTATATGGGTATGGAATACAACTTCAACATTCGTTACAACGTAACCTCTGATTTCCAAATCATTTTT CGTTCGGGTTATTTTGTGGCTGGGGATGCATTATTTGTACTTCTAGATTCAAAGTACGGTCGTGTGTTACGAGAAGCCTT TATCGTATTTGAACATCGATTCTAA
Upstream 100 bases:
>100_bases AATTTCTTTATTAAAGAATTGAAGCGAACAGGCAAAATCCAACAGTTAATCAATAAATATTTCAAATCCAACAAATGGGT GAAAAAAGAATAAATTCAAA
Downstream 100 bases:
>100_bases AATGTATTTTATCAAATTCCTTACAACGTCAGTCTCGATTTAATTGCCTTACCTAAAGTGTATTGGTCGGAATATTCCAA CGTTCCACCAATAGTAATCC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLTRLFSVTILVLIPFFFLSAQEEESQRTIMNFNGSFRVRATNVGRDVLLERKTPVTPITNLEKEETERVQSEQQTIQSD LERRQQGLPSQITRRKEDVSYYDSRFLYNMSFSANKYVEGIWGMQVGDIPFGGRGLRATGPDGFDPGLVGPGSGGERGRT AAVNVQTNLLYLNFRIPESGLFIKVGQQLFSSAQGRVLFSTGTGVSILKNFQFLRLSLEGGVLRARDQSFLDVDKNGFAD KNYQSSNIYYNRMKFEYFRNIRNEVYAYFLDDNDKTDNETARLAWYGLHNEFNFQKFSFIVHGILNTGIVKKLNAINDSN DVTIYNTTRRHYIKGGMYDFQFTYRWNESLNFNLIALGTTGRPGYDENGQEANLKGNGYRTLAPGFSISNIATDFTGGYA LFNGSSFSGLNEYGLYSNIIAFSPYQFTFGYYQLWATKSPEIRINREFSERNGYRTSTYMGMEYNFNIRYNVTSDFQIIF RSGYFVAGDALFVLLDSKYGRVLREAFIVFEHRF
Sequences:
>Translated_514_residues MLTRLFSVTILVLIPFFFLSAQEEESQRTIMNFNGSFRVRATNVGRDVLLERKTPVTPITNLEKEETERVQSEQQTIQSD LERRQQGLPSQITRRKEDVSYYDSRFLYNMSFSANKYVEGIWGMQVGDIPFGGRGLRATGPDGFDPGLVGPGSGGERGRT AAVNVQTNLLYLNFRIPESGLFIKVGQQLFSSAQGRVLFSTGTGVSILKNFQFLRLSLEGGVLRARDQSFLDVDKNGFAD KNYQSSNIYYNRMKFEYFRNIRNEVYAYFLDDNDKTDNETARLAWYGLHNEFNFQKFSFIVHGILNTGIVKKLNAINDSN DVTIYNTTRRHYIKGGMYDFQFTYRWNESLNFNLIALGTTGRPGYDENGQEANLKGNGYRTLAPGFSISNIATDFTGGYA LFNGSSFSGLNEYGLYSNIIAFSPYQFTFGYYQLWATKSPEIRINREFSERNGYRTSTYMGMEYNFNIRYNVTSDFQIIF RSGYFVAGDALFVLLDSKYGRVLREAFIVFEHRF >Mature_514_residues MLTRLFSVTILVLIPFFFLSAQEEESQRTIMNFNGSFRVRATNVGRDVLLERKTPVTPITNLEKEETERVQSEQQTIQSD LERRQQGLPSQITRRKEDVSYYDSRFLYNMSFSANKYVEGIWGMQVGDIPFGGRGLRATGPDGFDPGLVGPGSGGERGRT AAVNVQTNLLYLNFRIPESGLFIKVGQQLFSSAQGRVLFSTGTGVSILKNFQFLRLSLEGGVLRARDQSFLDVDKNGFAD KNYQSSNIYYNRMKFEYFRNIRNEVYAYFLDDNDKTDNETARLAWYGLHNEFNFQKFSFIVHGILNTGIVKKLNAINDSN DVTIYNTTRRHYIKGGMYDFQFTYRWNESLNFNLIALGTTGRPGYDENGQEANLKGNGYRTLAPGFSISNIATDFTGGYA LFNGSSFSGLNEYGLYSNIIAFSPYQFTFGYYQLWATKSPEIRINREFSERNGYRTSTYMGMEYNFNIRYNVTSDFQIIF RSGYFVAGDALFVLLDSKYGRVLREAFIVFEHRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58936; Mature: 58936
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRLFSVTILVLIPFFFLSAQEEESQRTIMNFNGSFRVRATNVGRDVLLERKTPVTPIT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCCCC NLEKEETERVQSEQQTIQSDLERRQQGLPSQITRRKEDVSYYDSRFLYNMSFSANKYVEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCEEEEEEECCCCHHHHE IWGMQVGDIPFGGRGLRATGPDGFDPGLVGPGSGGERGRTAAVNVQTNLLYLNFRIPESG ECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCC LFIKVGQQLFSSAQGRVLFSTGTGVSILKNFQFLRLSLEGGVLRARDQSFLDVDKNGFAD EEEEECHHHHCCCCCEEEEECCCCHHHHCCCEEEEEEECCCEEEECCCCEEECCCCCCCC KNYQSSNIYYNRMKFEYFRNIRNEVYAYFLDDNDKTDNETARLAWYGLHNEFNFQKFSFI CCCCCCCEEEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHH VHGILNTGIVKKLNAINDSNDVTIYNTTRRHYIKGGMYDFQFTYRWNESLNFNLIALGTT HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCEEEEEEEEECCCCCEEEEEEECC GRPGYDENGQEANLKGNGYRTLAPGFSISNIATDFTGGYALFNGSSFSGLNEYGLYSNII CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCEE AFSPYQFTFGYYQLWATKSPEIRINREFSERNGYRTSTYMGMEYNFNIRYNVTSDFQIIF EECCCEEECEEEEEEECCCCCEEEECCHHHCCCCEEEEEEEEEEEEEEEEECCCCEEEEE RSGYFVAGDALFVLLDSKYGRVLREAFIVFEHRF ECCCEEECCEEEEEEECHHHHHHHHHHHEEEECC >Mature Secondary Structure MLTRLFSVTILVLIPFFFLSAQEEESQRTIMNFNGSFRVRATNVGRDVLLERKTPVTPIT CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCEEEEECCCCCCCCC NLEKEETERVQSEQQTIQSDLERRQQGLPSQITRRKEDVSYYDSRFLYNMSFSANKYVEG CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCEEEEEEECCCCHHHHE IWGMQVGDIPFGGRGLRATGPDGFDPGLVGPGSGGERGRTAAVNVQTNLLYLNFRIPESG ECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCC LFIKVGQQLFSSAQGRVLFSTGTGVSILKNFQFLRLSLEGGVLRARDQSFLDVDKNGFAD EEEEECHHHHCCCCCEEEEECCCCHHHHCCCEEEEEEECCCEEEECCCCEEECCCCCCCC KNYQSSNIYYNRMKFEYFRNIRNEVYAYFLDDNDKTDNETARLAWYGLHNEFNFQKFSFI CCCCCCCEEEEEEHHHHHHHHCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHH VHGILNTGIVKKLNAINDSNDVTIYNTTRRHYIKGGMYDFQFTYRWNESLNFNLIALGTT HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEECCCEEEEEEEEECCCCCEEEEEEECC GRPGYDENGQEANLKGNGYRTLAPGFSISNIATDFTGGYALFNGSSFSGLNEYGLYSNII CCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCHHCEE AFSPYQFTFGYYQLWATKSPEIRINREFSERNGYRTSTYMGMEYNFNIRYNVTSDFQIIF EECCCEEECEEEEEEECCCCCEEEECCHHHCCCCEEEEEEEEEEEEEEEEECCCCEEEEE RSGYFVAGDALFVLLDSKYGRVLREAFIVFEHRF ECCCEEECCEEEEEEECHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA