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The map label for this gene is arlR [H]

Identifier: 183222749

GI number: 183222749

Start: 3527482

End: 3528222

Strand: Reverse

Name: arlR [H]

Synonym: LEPBI_I3407

Alternate gene names: 183222749

Gene position: 3528222-3527482 (Counterclockwise)

Preceding gene: 183222750

Following gene: 183222748

Centisome position: 98.01

GC content: 39.14

Gene sequence:

>741_bases
ATGAACCGTCCCAAAGTATATAAAATTTTACTCCTTGAAGACGATGAAAGTAGCGCAAAACTTTTATTACACACTTTGGA
ACGTTACAATTTTGATGTTACCCATGTGGTGGATGGGATGTCTGGCCTTACAAAAGTACGTAACAATAGTTATGATTTGG
TCATCAGTGATGTGAATATGCCGTATTTGGATGGAATTAGTTTTCTTGAAAAAGGCAAAGACATGTTGAAGTTAACACCT
GTGATCATGTTGACTGCCGTCGGAGAAAAAGACCAAGTGAAACGTGCGGCCGTAAACAATGTCACTGCGTATTTGTTAAA
GCCGATCGCAAACCAAGCCCTTCTCGAAAAAATCGCGCAAGTATTACAACTCAAACCAGAGAACATCATCGACAAAAAAG
AATTTCCTTTGGTTGTCAATGTCACAGAGCTTTCCATCTCCCAGATGCAATTGGACATCAAAGGGTGCCCTGGGAAAAAA
TCAGCCGAAGAAATCTACGATCGCTTTATGTTGACGCTTGCGGGGAGAGCTTCGTTTACCAATTTGAGAATGAATCTCGA
TAACGCTTTTTTTTATGAAGTTCGTGCCTTACAAATTTTAGATGATCTGATCGCAAAAATTCTAAAACAGACCAATATCC
GAGCCAGTTCCCTATTTGTGGATTCGGAATTTTTCTCCAATCATGTAGTAGACTTACAGCCATACACGTATCTTTCCGAA
GTAAATATAATTTCCAAATGA

Upstream 100 bases:

>100_bases
TTAGTCGATGCGTATTTATACCAAAGAGCCTTACAACCAAAATGGTTCATGAAGTATGCAAATTTAAATGCAATTCCAAA
CCAATAAGGACCGATAACCG

Downstream 100 bases:

>100_bases
AGGTTTGACAAAATCAAAAGACCTAAGTCTAATCAAACCTAGGGGGTCTGTTCTTTGGTTAAGATAAAGATAGACGGAGT
CGAATACGAAGTCGACGAAA

Product: putative chemotactis response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNRPKVYKILLLEDDESSAKLLLHTLERYNFDVTHVVDGMSGLTKVRNNSYDLVISDVNMPYLDGISFLEKGKDMLKLTP
VIMLTAVGEKDQVKRAAVNNVTAYLLKPIANQALLEKIAQVLQLKPENIIDKKEFPLVVNVTELSISQMQLDIKGCPGKK
SAEEIYDRFMLTLAGRASFTNLRMNLDNAFFYEVRALQILDDLIAKILKQTNIRASSLFVDSEFFSNHVVDLQPYTYLSE
VNIISK

Sequences:

>Translated_246_residues
MNRPKVYKILLLEDDESSAKLLLHTLERYNFDVTHVVDGMSGLTKVRNNSYDLVISDVNMPYLDGISFLEKGKDMLKLTP
VIMLTAVGEKDQVKRAAVNNVTAYLLKPIANQALLEKIAQVLQLKPENIIDKKEFPLVVNVTELSISQMQLDIKGCPGKK
SAEEIYDRFMLTLAGRASFTNLRMNLDNAFFYEVRALQILDDLIAKILKQTNIRASSLFVDSEFFSNHVVDLQPYTYLSE
VNIISK
>Mature_246_residues
MNRPKVYKILLLEDDESSAKLLLHTLERYNFDVTHVVDGMSGLTKVRNNSYDLVISDVNMPYLDGISFLEKGKDMLKLTP
VIMLTAVGEKDQVKRAAVNNVTAYLLKPIANQALLEKIAQVLQLKPENIIDKKEFPLVVNVTELSISQMQLDIKGCPGKK
SAEEIYDRFMLTLAGRASFTNLRMNLDNAFFYEVRALQILDDLIAKILKQTNIRASSLFVDSEFFSNHVVDLQPYTYLSE
VNIISK

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=29.5081967213115, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27893; Mature: 27893

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPKVYKILLLEDDESSAKLLLHTLERYNFDVTHVVDGMSGLTKVRNNSYDLVISDVNM
CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
PYLDGISFLEKGKDMLKLTPVIMLTAVGEKDQVKRAAVNNVTAYLLKPIANQALLEKIAQ
CHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQLKPENIIDKKEFPLVVNVTELSISQMQLDIKGCPGKKSAEEIYDRFMLTLAGRASFT
HHHCCCCCCCCCCCCCEEEEEHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEE
NLRMNLDNAFFYEVRALQILDDLIAKILKQTNIRASSLFVDSEFFSNHVVDLQPYTYLSE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHCCCEEECCCCHHHHH
VNIISK
EEECCC
>Mature Secondary Structure
MNRPKVYKILLLEDDESSAKLLLHTLERYNFDVTHVVDGMSGLTKVRNNSYDLVISDVNM
CCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC
PYLDGISFLEKGKDMLKLTPVIMLTAVGEKDQVKRAAVNNVTAYLLKPIANQALLEKIAQ
CHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQLKPENIIDKKEFPLVVNVTELSISQMQLDIKGCPGKKSAEEIYDRFMLTLAGRASFT
HHHCCCCCCCCCCCCCEEEEEHHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEE
NLRMNLDNAFFYEVRALQILDDLIAKILKQTNIRASSLFVDSEFFSNHVVDLQPYTYLSE
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEHHHHCCCEEECCCCHHHHH
VNIISK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA