| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222741
Identifier: 183222741
GI number: 183222741
Start: 3519487
End: 3520686
Strand: Reverse
Name: 183222741
Synonym: LEPBI_I3397
Alternate gene names: NA
Gene position: 3520686-3519487 (Counterclockwise)
Preceding gene: 183222742
Following gene: 183222740
Centisome position: 97.81
GC content: 32.5
Gene sequence:
>1200_bases ATGAAATCGAAATACTATTTTTTCTTAATGCTTTTACTACTTGGTTGTTCCGAAAAAAAAGTAGAATCAGAGCAAGGATC GCTCCAACGTTTTGTCACACAAATTCCAGCAGCTCAAGTTTACGATTCCATTGACTTAACGAAAGTTAGTTTAACCATTC CTTGGAAATCAATAGTGATGATCAAAAAAATGGTACAAAACAAAGACCAAATCTCTGTGATACACTTTACTTATGAAGGA AAGGATTATTATGGAAAAAACTCTGATTTTTCCGAAAGGAAACCTGAACTGTTTATGAGGGTGAATGTCAATTCAAGGTT ACGTCTTCGTGAAAAACCAAACAAGGATTCGAATGTATTGGAGAAGATTCCCAATGGATATGTATCAAGTGTTCTTGCGA TTGACCCTAAGCTTGTCACCATCGATTCAATTAAGGGATATTGGTTTCAAATTGCATATAACGGAAAAAGTGGATGGATC TTTTCTGGTTATACGATCACTACATGGAGCGAACATCAATTAAACTGGGCTGATTCATTAAGTTTTGAACCTGAAGAATT AAGTAGCAATTTAGCAGATTTACAAAATGAGTTAATGGATTACGAAATCAATGAACAAAACTCGATCAATGGTTACGATC TCATTCTTGCAAAACGTAAAAATCAAACGGAAATGGAAGAATGTATAGAGGGACAAAAACTTTTCATTTATAACAAAAAA GAAAATTTTATATATAAATCAGATAGATTCTCAACTTCGATTGCAAAGTTAGACCATCCATTTAAAAATGCAATTTTGGT GAGAGAAGAACATTGCGGATGTTGTTGTCCTAGCTCCAGTGAAAGTATCATACACTTAGGAAAAACTCCGATCAAAATGG AATCTTTTTTAAAAGATAATTCTATGAGTTGTTCCTTTATTTATGGTGAAACTTCATTCCGGTATGAAGTTACAAATAAA TTTACAGATAACCAAGAGAATTTGAAGTATGTGAGGACACCAGATTGTTATGAATTTTTCAATTCAACAAATGATATTGA TATCGATTCGGAAGTTTCCATCGTTCCAACTAAAATTTCTAATGAATATTTTGTATATAGCAAATATGGTAAAACTTTGG AAGTAGAAGTGTTTAAAAATGAAGGGATACCTAAGCAATACAAAACATTATGGGAAACCTCCCATGCTGAATTGAAGTAA
Upstream 100 bases:
>100_bases CGATCCAATTTTTAGAATCGAAGAATAAAATATAGGATTTATGATTGTGAATCAAATTAGGTAGATTGAAAATCGAATTT GAATCTTAGGCACAAATTTT
Downstream 100 bases:
>100_bases ATATCGACAAACATTAGTAAGACAAAAAGAAGAGAAGGAAATAAACGCAGTGGAGATATCCATTCAAACTCAAGAAATCG AATCCTTGGAGAAACAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKSKYYFFLMLLLLGCSEKKVESEQGSLQRFVTQIPAAQVYDSIDLTKVSLTIPWKSIVMIKKMVQNKDQISVIHFTYEG KDYYGKNSDFSERKPELFMRVNVNSRLRLREKPNKDSNVLEKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWI FSGYTITTWSEHQLNWADSLSFEPEELSSNLADLQNELMDYEINEQNSINGYDLILAKRKNQTEMEECIEGQKLFIYNKK ENFIYKSDRFSTSIAKLDHPFKNAILVREEHCGCCCPSSSESIIHLGKTPIKMESFLKDNSMSCSFIYGETSFRYEVTNK FTDNQENLKYVRTPDCYEFFNSTNDIDIDSEVSIVPTKISNEYFVYSKYGKTLEVEVFKNEGIPKQYKTLWETSHAELK
Sequences:
>Translated_399_residues MKSKYYFFLMLLLLGCSEKKVESEQGSLQRFVTQIPAAQVYDSIDLTKVSLTIPWKSIVMIKKMVQNKDQISVIHFTYEG KDYYGKNSDFSERKPELFMRVNVNSRLRLREKPNKDSNVLEKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWI FSGYTITTWSEHQLNWADSLSFEPEELSSNLADLQNELMDYEINEQNSINGYDLILAKRKNQTEMEECIEGQKLFIYNKK ENFIYKSDRFSTSIAKLDHPFKNAILVREEHCGCCCPSSSESIIHLGKTPIKMESFLKDNSMSCSFIYGETSFRYEVTNK FTDNQENLKYVRTPDCYEFFNSTNDIDIDSEVSIVPTKISNEYFVYSKYGKTLEVEVFKNEGIPKQYKTLWETSHAELK >Mature_399_residues MKSKYYFFLMLLLLGCSEKKVESEQGSLQRFVTQIPAAQVYDSIDLTKVSLTIPWKSIVMIKKMVQNKDQISVIHFTYEG KDYYGKNSDFSERKPELFMRVNVNSRLRLREKPNKDSNVLEKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWI FSGYTITTWSEHQLNWADSLSFEPEELSSNLADLQNELMDYEINEQNSINGYDLILAKRKNQTEMEECIEGQKLFIYNKK ENFIYKSDRFSTSIAKLDHPFKNAILVREEHCGCCCPSSSESIIHLGKTPIKMESFLKDNSMSCSFIYGETSFRYEVTNK FTDNQENLKYVRTPDCYEFFNSTNDIDIDSEVSIVPTKISNEYFVYSKYGKTLEVEVFKNEGIPKQYKTLWETSHAELK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46391; Mature: 46391
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKYYFFLMLLLLGCSEKKVESEQGSLQRFVTQIPAAQVYDSIDLTKVSLTIPWKSIVM CCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCHHHHHH IKKMVQNKDQISVIHFTYEGKDYYGKNSDFSERKPELFMRVNVNSRLRLREKPNKDSNVL HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHH EKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWIFSGYTITTWSEHQLNWADSL HHCCCHHHHHEEEECCEEEEEECCCCEEEEEEEECCCCEEEECEEEEECCCCCCCHHHCC SFEPEELSSNLADLQNELMDYEINEQNSINGYDLILAKRKNQTEMEECIEGQKLFIYNKK CCCHHHHHHHHHHHHHHHHCEECCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEEEECC ENFIYKSDRFSTSIAKLDHPFKNAILVREEHCGCCCPSSSESIIHLGKTPIKMESFLKDN CCEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHCCC SMSCSFIYGETSFRYEVTNKFTDNQENLKYVRTPDCYEFFNSTNDIDIDSEVSIVPTKIS CCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCEEEEEEEC NEYFVYSKYGKTLEVEVFKNEGIPKQYKTLWETSHAELK CCEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MKSKYYFFLMLLLLGCSEKKVESEQGSLQRFVTQIPAAQVYDSIDLTKVSLTIPWKSIVM CCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCHHHHHH IKKMVQNKDQISVIHFTYEGKDYYGKNSDFSERKPELFMRVNVNSRLRLREKPNKDSNVL HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHH EKIPNGYVSSVLAIDPKLVTIDSIKGYWFQIAYNGKSGWIFSGYTITTWSEHQLNWADSL HHCCCHHHHHEEEECCEEEEEECCCCEEEEEEEECCCCEEEECEEEEECCCCCCCHHHCC SFEPEELSSNLADLQNELMDYEINEQNSINGYDLILAKRKNQTEMEECIEGQKLFIYNKK CCCHHHHHHHHHHHHHHHHCEECCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEEEECC ENFIYKSDRFSTSIAKLDHPFKNAILVREEHCGCCCPSSSESIIHLGKTPIKMESFLKDN CCEEEECCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHCCC SMSCSFIYGETSFRYEVTNKFTDNQENLKYVRTPDCYEFFNSTNDIDIDSEVSIVPTKIS CCEEEEEECCCEEEEEECCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCEEEEEEEC NEYFVYSKYGKTLEVEVFKNEGIPKQYKTLWETSHAELK CCEEEEECCCCEEEEEEEECCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA