| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222708
Identifier: 183222708
GI number: 183222708
Start: 3477452
End: 3478732
Strand: Reverse
Name: 183222708
Synonym: LEPBI_I3364
Alternate gene names: NA
Gene position: 3478732-3477452 (Counterclockwise)
Preceding gene: 183222709
Following gene: 183222707
Centisome position: 96.64
GC content: 41.53
Gene sequence:
>1281_bases ATGAAAAATTCATTCAAAAAAAGCCTGGTGCTCTTTTCCATCGCATTGATGGGATTCACTGCGGTGAATTGTACAGAAAG TAAAAAAGATGATAGTCTTTTACTTGCAGCATTGTTGTTTTCAAACCAAGGTGTTGCAGGATCTGACTTATGTGATGGTG TTGGTGTACCAACTCCTACTCAAATTCTAGAGGGAACTATCTCCTCTGCAGTGACTGTAAGCGGTTCTGCACTGCTTAGA GGAACTGTAAACGTTACAAATGGTGGTTCTATCACTGTGCTACCAAAATCTGTCATTTACGGAGAAAGAGGATCTTCACT TTTCGTCTATGAAGGCGGAACCCTTTCTGCAATTGGTACAGCAGCTCAACCAATTTGTTTTACTTCGGCGGCAACTGTTG GAACAAGAGCGCCTGGTGATTGGGGTGGAATCGTAATCGTTGGAAACAGCGCGATTAAAGCAAATACGGCACCAAATGAT ACGGAAGGAACATCTCCCAGATCATACCCAGGAACGTTAAATGGAATTGCAAATTTAAAGTATGTTGTCATTGAATTCGT TGGAAACGAGGTGGCACCTGGAAACGAATTGAATGGTCTTTCTAGTTATACAGTGACGCAAGATAGTAACTACGATTATG TGCAAATTCACAGACCATTGGATGATGGATTTGAATGGTGGGGCGGAAATGTAAATGGTTCACACCTTTTAGTATCTGGT GGTATGGATGATGACTTTGATGTGGATGAAGGATTTACAGGAACACTCAATCACATTATCAGTGTAAAATATCCAGAGTC TTGTGGAGGAACAAAATCGTCTGACCCACATGGTTTTGAAATGGATGGAACAGAAGGTGGTGCTGTAATTGCAGGACCTT CAAACCCTACTGTGACAAACTTCACGACAATTGGTCAATCCTACACTGGTGGCGTTGGTATGCGAATCAGAGAAAGACAC ACAGGAAATTTTTCAAAGGGTTTGGTTTATGGATACGTAACAAACAACTTTCAATGTGATGCAAACACAAATCCTACATC TTGGACAAACGTAAAAGGTCAAAGTGGAAAAGGTGCAACAATTGATGGTGCTTGTACCAATATGGTAAACAACACTGAAA TCACTGCACTTCCAATTACAACATTAGGAAACATTGAAACTTGCGGAACTGGAGCAACTAAGCCAGATTTCACAACTACA TTTGGTGATGGTTCTCTTGGTGGCGGATCAGTCGCTGAAGGTAAGTGGTGGGATGGCTGGGCTGTCTTTAGAAGCAAATA A
Upstream 100 bases:
>100_bases AAGAACATAGTTTCCATAGCTAGAGGGAGAATTTTAACGAATCCCTTTCGGGAAGACCCGCTAGCGAAACAAATTCGAAT CATTTCGAAAGAGGATTAAA
Downstream 100 bases:
>100_bases ACAAATTTTAAAAAATTATAAAAAAGGCTTCGGAATTTCCGGAGCCTTTTTTATTTTAAAACAATGAAACAGAAAACATT CATAATTATTATCATCGTTG
Product: putative outer membrane lipoprotein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT FGDGSLGGGSVAEGKWWDGWAVFRSK
Sequences:
>Translated_426_residues MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT FGDGSLGGGSVAEGKWWDGWAVFRSK >Mature_426_residues MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPTQILEGTISSAVTVSGSALLR GTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGTAAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPND TEGTSPRSYPGTLNGIANLKYVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTNFTTIGQSYTGGVGMRIRERH TGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGATIDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTT FGDGSLGGGSVAEGKWWDGWAVFRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44226; Mature: 44226
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPT CCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHEEEEEHHCCCCCCCCHHHCCCCCCCHH QILEGTISSAVTVSGSALLRGTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGT HHHHHHHHCEEEECCCEEEEEEEEECCCCEEEEEEHHEEECCCCCEEEEECCCCEEECCC AAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPNDTEGTSPRSYPGTLNGIANLK CCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE YVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEEC GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTN CCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEE FTTIGQSYTGGVGMRIRERHTGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGAT EEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE IDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTTFGDGSLGGGSVAEGKWWDGW ECHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE AVFRSK EEEECC >Mature Secondary Structure MKNSFKKSLVLFSIALMGFTAVNCTESKKDDSLLLAALLFSNQGVAGSDLCDGVGVPTPT CCCHHHHHHHHHHHHHHHEEEECCCCCCCCCHHEEEEEHHCCCCCCCCHHHCCCCCCCHH QILEGTISSAVTVSGSALLRGTVNVTNGGSITVLPKSVIYGERGSSLFVYEGGTLSAIGT HHHHHHHHCEEEECCCEEEEEEEEECCCCEEEEEEHHEEECCCCCEEEEECCCCEEECCC AAQPICFTSAATVGTRAPGDWGGIVIVGNSAIKANTAPNDTEGTSPRSYPGTLNGIANLK CCCCEEEECCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE YVVIEFVGNEVAPGNELNGLSSYTVTQDSNYDYVQIHRPLDDGFEWWGGNVNGSHLLVSG EEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCHHHCCCCCCCCEEEEEC GMDDDFDVDEGFTGTLNHIISVKYPESCGGTKSSDPHGFEMDGTEGGAVIAGPSNPTVTN CCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEE FTTIGQSYTGGVGMRIRERHTGNFSKGLVYGYVTNNFQCDANTNPTSWTNVKGQSGKGAT EEECCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE IDGACTNMVNNTEITALPITTLGNIETCGTGATKPDFTTTFGDGSLGGGSVAEGKWWDGW ECHHHHHCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCE AVFRSK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA