| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222697
Identifier: 183222697
GI number: 183222697
Start: 3463167
End: 3463808
Strand: Reverse
Name: 183222697
Synonym: LEPBI_I3353
Alternate gene names: NA
Gene position: 3463808-3463167 (Counterclockwise)
Preceding gene: 183222698
Following gene: 183222696
Centisome position: 96.23
GC content: 39.25
Gene sequence:
>642_bases TTGAAACAGGTTATCATTTTCTTCACTTGTCTCTTTCTCCACACTTTCTGTTTGCAAAGTGGCGAAGACATACAACAGAA AAATGAAGAAGAGACAACTTGGCTCCTCTCCACTTTGTTATGGCAAAGGAATTCTGGAAATTGTATCAAAACCGATACGA ATACAAACATTAGTACGTGTAGTCGCCGTCCTTTGGGAATCTGTAATGTAAACCAACTCATTGTAACGCAAGCGGAAGTA AATTATACCTTAAATGAATCTAGAACGATTCAAAATCGAACTCCTGATTGCCAAGAATCGATCTTACAATCAGGGATTTT ATCGCAATCCGCGACTTCAAATGCAAACAGCGATACCATCAAAGCTAGGTATCGTTTTTTAGTCACAGAATCCTGTGAGG CATCGGGAGTCCAACCGAGCTCGGATACAAGGTTTGCAACATTTTTTGAAATCCAATGGTTAGAATCTACGCGTGGAAAA ATTGCCAAGGCTGCCAAATCAATTGAGGCAAATGGCTTTTTGCCTCAGAACTCTCGTGATAAGGCTAACAGTTGTTTGCA GTTCGAATTTTTAGAATGGGAAAAAGGATTGGCAGAGGGTAATCTTCAAAACAAAATTCTCATCGAAATCATAGTACCTT AA
Upstream 100 bases:
>100_bases CCACGTACGATACAGTCAATTCACCATTTATCATCTCTCAAACTCCCAATGGAAAGATGGCCATCATCCCACTCATCAAT ATTGGAATGGAGGTACGATT
Downstream 100 bases:
>100_bases TTTTGAAAATCCGCTTTCCTTTCTCTTCCACTTTTACATTTTGACTTTAATCCGAAGGAAATTGTAAATTATGAGTTTGA ATCGATACAGCCGTGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MKQVIIFFTCLFLHTFCLQSGEDIQQKNEEETTWLLSTLLWQRNSGNCIKTDTNTNISTCSRRPLGICNVNQLIVTQAEV NYTLNESRTIQNRTPDCQESILQSGILSQSATSNANSDTIKARYRFLVTESCEASGVQPSSDTRFATFFEIQWLESTRGK IAKAAKSIEANGFLPQNSRDKANSCLQFEFLEWEKGLAEGNLQNKILIEIIVP
Sequences:
>Translated_213_residues MKQVIIFFTCLFLHTFCLQSGEDIQQKNEEETTWLLSTLLWQRNSGNCIKTDTNTNISTCSRRPLGICNVNQLIVTQAEV NYTLNESRTIQNRTPDCQESILQSGILSQSATSNANSDTIKARYRFLVTESCEASGVQPSSDTRFATFFEIQWLESTRGK IAKAAKSIEANGFLPQNSRDKANSCLQFEFLEWEKGLAEGNLQNKILIEIIVP >Mature_213_residues MKQVIIFFTCLFLHTFCLQSGEDIQQKNEEETTWLLSTLLWQRNSGNCIKTDTNTNISTCSRRPLGICNVNQLIVTQAEV NYTLNESRTIQNRTPDCQESILQSGILSQSATSNANSDTIKARYRFLVTESCEASGVQPSSDTRFATFFEIQWLESTRGK IAKAAKSIEANGFLPQNSRDKANSCLQFEFLEWEKGLAEGNLQNKILIEIIVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24029; Mature: 24029
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVIIFFTCLFLHTFCLQSGEDIQQKNEEETTWLLSTLLWQRNSGNCIKTDTNTNISTC CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHC SRRPLGICNVNQLIVTQAEVNYTLNESRTIQNRTPDCQESILQSGILSQSATSNANSDTI CCCCCCEECCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC KARYRFLVTESCEASGVQPSSDTRFATFFEIQWLESTRGKIAKAAKSIEANGFLPQNSRD EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC KANSCLQFEFLEWEKGLAEGNLQNKILIEIIVP CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKQVIIFFTCLFLHTFCLQSGEDIQQKNEEETTWLLSTLLWQRNSGNCIKTDTNTNISTC CCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHC SRRPLGICNVNQLIVTQAEVNYTLNESRTIQNRTPDCQESILQSGILSQSATSNANSDTI CCCCCCEECCCEEEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC KARYRFLVTESCEASGVQPSSDTRFATFFEIQWLESTRGKIAKAAKSIEANGFLPQNSRD EEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCC KANSCLQFEFLEWEKGLAEGNLQNKILIEIIVP CCCCEEEEEEHHHHCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA