| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222644
Identifier: 183222644
GI number: 183222644
Start: 3412366
End: 3413097
Strand: Reverse
Name: 183222644
Synonym: LEPBI_I3299
Alternate gene names: NA
Gene position: 3413097-3412366 (Counterclockwise)
Preceding gene: 183222645
Following gene: 183222643
Centisome position: 94.82
GC content: 38.8
Gene sequence:
>732_bases TTGATAATTTATTTCCACATGGTTGTTAGAGTGATTATGAGCCTCAAAATCCCTCTAACCATCCTTTTTTCCCTTCTAAC TACTGTTTCCTTATTTGCGGAAGAGTTTGCAGTTGCGACCTTCACACGTGGGAAAGTGAGTTTTTTATCGGCATCTGATA CTTCCAAACTTTGGAAAACCCTCAAAGTGAATGATGTGCTCAAACCAGGTGATCGGATCAAAACGGGCAATGGATCCAAA GTTGATTTTTTATACCAAGAAACAGAAATTCGAATCCAACCAAACACTGATTTTACGTTAAAAGAATGGAACTCTGATAA AAAAGAGGCGAAAGCGTTTGTGCAAAACGGAGCTGCATGGTTTCGCGTGAACAATTTTAAAAAAGGAAGTTTTGAAGTTT CCACACCAACAACGACTGCAGGAGTGCGCGGAACAGCTTTTGGGGTATTTTTCGAAGAAAAAGAAAAAACGGGTTATACT TGCGTTTGTGAAGGTTTGGTGAATATCAATGGTGAGGATTTTGCGAAAGGGACTGGTGGAGCCAAAAAAGTAGGAGCCAC AGAACTAGAAAAAAAACAATATAAAGATATCATCACAAAAGATGGTGCTACAATTCTTTTGAAAGAAAAAAGAAAGGAAT TTCCAATGTTGAATCGATGCCTTCCATGCCATAAACCAATTGGTTGGGAAGATAAATCGTTCACACCGGATGAAACGTAC GGCAATAAGTGA
Upstream 100 bases:
>100_bases AAAAGCCGAGAACGTGAGGAATTGGAGTACAAATTGTCTCAGTTGGGATTTTCCATCCCTTGGTAGGGTCTTTGCTTCTC CCTCCCATTTTAGTTTTTGA
Downstream 100 bases:
>100_bases ATTTTTTTTATAGGTTTATAGTTTTATTTTTCCTCTTCATCTATCCTATATTAGGTGAAGAGGTAATCACAACAAAAAAA GAAGAACCCGATGGCTACTA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIIYFHMVVRVIMSLKIPLTILFSLLTTVSLFAEEFAVATFTRGKVSFLSASDTSKLWKTLKVNDVLKPGDRIKTGNGSK VDFLYQETEIRIQPNTDFTLKEWNSDKKEAKAFVQNGAAWFRVNNFKKGSFEVSTPTTTAGVRGTAFGVFFEEKEKTGYT CVCEGLVNINGEDFAKGTGGAKKVGATELEKKQYKDIITKDGATILLKEKRKEFPMLNRCLPCHKPIGWEDKSFTPDETY GNK
Sequences:
>Translated_243_residues MIIYFHMVVRVIMSLKIPLTILFSLLTTVSLFAEEFAVATFTRGKVSFLSASDTSKLWKTLKVNDVLKPGDRIKTGNGSK VDFLYQETEIRIQPNTDFTLKEWNSDKKEAKAFVQNGAAWFRVNNFKKGSFEVSTPTTTAGVRGTAFGVFFEEKEKTGYT CVCEGLVNINGEDFAKGTGGAKKVGATELEKKQYKDIITKDGATILLKEKRKEFPMLNRCLPCHKPIGWEDKSFTPDETY GNK >Mature_243_residues MIIYFHMVVRVIMSLKIPLTILFSLLTTVSLFAEEFAVATFTRGKVSFLSASDTSKLWKTLKVNDVLKPGDRIKTGNGSK VDFLYQETEIRIQPNTDFTLKEWNSDKKEAKAFVQNGAAWFRVNNFKKGSFEVSTPTTTAGVRGTAFGVFFEEKEKTGYT CVCEGLVNINGEDFAKGTGGAKKVGATELEKKQYKDIITKDGATILLKEKRKEFPMLNRCLPCHKPIGWEDKSFTPDETY GNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27285; Mature: 27285
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYFHMVVRVIMSLKIPLTILFSLLTTVSLFAEEFAVATFTRGKVSFLSASDTSKLWKT CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHH LKVNDVLKPGDRIKTGNGSKVDFLYQETEIRIQPNTDFTLKEWNSDKKEAKAFVQNGAAW HHHCCCCCCCCCEECCCCCEEEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCEE FRVNNFKKGSFEVSTPTTTAGVRGTAFGVFFEEKEKTGYTCVCEGLVNINGEDFAKGTGG EEECCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC AKKVGATELEKKQYKDIITKDGATILLKEKRKEFPMLNRCLPCHKPIGWEDKSFTPDETY CCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC GNK CCC >Mature Secondary Structure MIIYFHMVVRVIMSLKIPLTILFSLLTTVSLFAEEFAVATFTRGKVSFLSASDTSKLWKT CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCHHHHHHH LKVNDVLKPGDRIKTGNGSKVDFLYQETEIRIQPNTDFTLKEWNSDKKEAKAFVQNGAAW HHHCCCCCCCCCEECCCCCEEEEEEEEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCEE FRVNNFKKGSFEVSTPTTTAGVRGTAFGVFFEEKEKTGYTCVCEGLVNINGEDFAKGTGG EEECCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC AKKVGATELEKKQYKDIITKDGATILLKEKRKEFPMLNRCLPCHKPIGWEDKSFTPDETY CCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC GNK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA