| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222595
Identifier: 183222595
GI number: 183222595
Start: 3364591
End: 3366072
Strand: Reverse
Name: 183222595
Synonym: LEPBI_I3250
Alternate gene names: NA
Gene position: 3366072-3364591 (Counterclockwise)
Preceding gene: 183222596
Following gene: 183222593
Centisome position: 93.51
GC content: 33.33
Gene sequence:
>1482_bases ATGTCGCAAGAGTTTCAAGAGGGTGATAACGAAATCCAATCCATAGTCGATTTTAAAAAAGGTTACGTTTACTTTCTCAA TAATTTCCAAAACATAGTCGGGAGTTTTCTTCAATTCCTAGTAACAGGACTAACGGAAGCAAACAAACGAGAGATTTTAC CGTTTCGAAAAACTCTCGATCAAGAACTCGACAAGTCCCAAAAAAAAATCAAAGAGATCATCTTTAACTTAGATGAGAAA CATTTATTTGCACAGGTAAGGAAGGATTACTCTCGTTACTTTTCTCGGCATATCGAAGATAATAACCGAGATGATTTCAT CCAGTTCCATTTGATCTTTGAGATGTTGCGATTTTTTTATATTGAAACCAAAGAAGGATGGGAGAAATTAAAAGCCGCTG TTTTAGAGAATCCTTTTACTGATTTAGAATTTCAAAAAAATGGACTTCTCAACTATCGAATCGTACCTGCCTTAGAAAAA CTAAATCATTTGGAAATTTTACTTCGAAGGATGAGTTTTATCTTACAAATCGACAATCCAAATAGTTTGAGTGAATTCAA ACCTACAAAACCAAAATATCGTGATAAAACAACGTATCGGCTATCAGCTGTTTTTGATGAATCATTGTATGACAAACCAA AAGATTTGGAACCGGAAGATTCTGGAATTGAATACAAAGCAGACGAAGTCATTCAAAACCATCAGGAAAAATCAAAGGAC AATTGGAAAGTTGTCAAACAAAAGATCAAAAACGAAGGGGAACCTAATTATATCCAAGCTTACGGAAAATATACTTGGAA CTCGGACCAACATTATTTTTTTCGATATGAATTGGATAAATACAATGCAGAAAAAGCCTTATTCAAAACAGCGATCAGTT TGGATTCCCATTTGGGAGCAGATGAACAAGTGTTACGTTCTGAATTAATTCGTTCCATGACAAGTATTGAAAAAAAAGGA AAATCAGCTGAGGACTTTGAATTAGAATACCAAAGCTTTCTCAAACAATTTTTTACTTTTTGTGAAAACATCATTTTGAT GAATATGATGTTACCGACGCAATTTAAATATGTTTTTTTGTTTCACTTGGGACCTTCCCACTTTTACATGATTGCAAAAA AATTCTTAATGGAAGTAAACACAGGTTATGTTCACGCTAGGGGCAGCGATGGTAAAAAGGTCATCCGATTGATTCCAGGG GAATATGTAAAAAAACATGTGATCGATTATTGGAATGAAGTGATTTTACCAAATGTTGGTGAAGAAAAAAATAACTTAGC ATTACTGAAAAAAATAACAGAAATGATCGAAGAGAAATACAAAGAAATTTCAAAACTGGCGATCAAAAATTATGAAAATC TTGATGTTGAAATCAAAACTTCTAAACCGAGAGAAACCATATTTCGCGAGTATATGAATGAGTGGATGGGAGCAGCCAAT CTCATTGTATTCAAACGATTCGTTAAAAATAAATCGTTTTAG
Upstream 100 bases:
>100_bases GTTTGACGTTTGCTGATCCTAGTCAAAATTTAATCGAGATCTTTTACTCAAACTAAATCCTGTTGCTTTTTTAGTCTTTT ATTCGTAACATCCTCTTGGT
Downstream 100 bases:
>100_bases AGAACTAAACTACAAGTCGCTGATTCTGCGGTGATATAAAACTGCGTGGCAACTCCTGATGGAAATGGAATGATTGGATT GTTTTGTAAAACGTAATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MSQEFQEGDNEIQSIVDFKKGYVYFLNNFQNIVGSFLQFLVTGLTEANKREILPFRKTLDQELDKSQKKIKEIIFNLDEK HLFAQVRKDYSRYFSRHIEDNNRDDFIQFHLIFEMLRFFYIETKEGWEKLKAAVLENPFTDLEFQKNGLLNYRIVPALEK LNHLEILLRRMSFILQIDNPNSLSEFKPTKPKYRDKTTYRLSAVFDESLYDKPKDLEPEDSGIEYKADEVIQNHQEKSKD NWKVVKQKIKNEGEPNYIQAYGKYTWNSDQHYFFRYELDKYNAEKALFKTAISLDSHLGADEQVLRSELIRSMTSIEKKG KSAEDFELEYQSFLKQFFTFCENIILMNMMLPTQFKYVFLFHLGPSHFYMIAKKFLMEVNTGYVHARGSDGKKVIRLIPG EYVKKHVIDYWNEVILPNVGEEKNNLALLKKITEMIEEKYKEISKLAIKNYENLDVEIKTSKPRETIFREYMNEWMGAAN LIVFKRFVKNKSF
Sequences:
>Translated_493_residues MSQEFQEGDNEIQSIVDFKKGYVYFLNNFQNIVGSFLQFLVTGLTEANKREILPFRKTLDQELDKSQKKIKEIIFNLDEK HLFAQVRKDYSRYFSRHIEDNNRDDFIQFHLIFEMLRFFYIETKEGWEKLKAAVLENPFTDLEFQKNGLLNYRIVPALEK LNHLEILLRRMSFILQIDNPNSLSEFKPTKPKYRDKTTYRLSAVFDESLYDKPKDLEPEDSGIEYKADEVIQNHQEKSKD NWKVVKQKIKNEGEPNYIQAYGKYTWNSDQHYFFRYELDKYNAEKALFKTAISLDSHLGADEQVLRSELIRSMTSIEKKG KSAEDFELEYQSFLKQFFTFCENIILMNMMLPTQFKYVFLFHLGPSHFYMIAKKFLMEVNTGYVHARGSDGKKVIRLIPG EYVKKHVIDYWNEVILPNVGEEKNNLALLKKITEMIEEKYKEISKLAIKNYENLDVEIKTSKPRETIFREYMNEWMGAAN LIVFKRFVKNKSF >Mature_492_residues SQEFQEGDNEIQSIVDFKKGYVYFLNNFQNIVGSFLQFLVTGLTEANKREILPFRKTLDQELDKSQKKIKEIIFNLDEKH LFAQVRKDYSRYFSRHIEDNNRDDFIQFHLIFEMLRFFYIETKEGWEKLKAAVLENPFTDLEFQKNGLLNYRIVPALEKL NHLEILLRRMSFILQIDNPNSLSEFKPTKPKYRDKTTYRLSAVFDESLYDKPKDLEPEDSGIEYKADEVIQNHQEKSKDN WKVVKQKIKNEGEPNYIQAYGKYTWNSDQHYFFRYELDKYNAEKALFKTAISLDSHLGADEQVLRSELIRSMTSIEKKGK SAEDFELEYQSFLKQFFTFCENIILMNMMLPTQFKYVFLFHLGPSHFYMIAKKFLMEVNTGYVHARGSDGKKVIRLIPGE YVKKHVIDYWNEVILPNVGEEKNNLALLKKITEMIEEKYKEISKLAIKNYENLDVEIKTSKPRETIFREYMNEWMGAANL IVFKRFVKNKSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58759; Mature: 58628
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEFQEGDNEIQSIVDFKKGYVYFLNNFQNIVGSFLQFLVTGLTEANKREILPFRKTLD CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH QELDKSQKKIKEIIFNLDEKHLFAQVRKDYSRYFSRHIEDNNRDDFIQFHLIFEMLRFFY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IETKEGWEKLKAAVLENPFTDLEFQKNGLLNYRIVPALEKLNHLEILLRRMSFILQIDNP HHCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCC NSLSEFKPTKPKYRDKTTYRLSAVFDESLYDKPKDLEPEDSGIEYKADEVIQNHQEKSKD CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH NWKVVKQKIKNEGEPNYIQAYGKYTWNSDQHYFFRYELDKYNAEKALFKTAISLDSHLGA HHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECHHCHHHHHHHHHHHHHHCCCC DEQVLRSELIRSMTSIEKKGKSAEDFELEYQSFLKQFFTFCENIILMNMMLPTQFKYVFL CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE FHLGPSHFYMIAKKFLMEVNTGYVHARGSDGKKVIRLIPGEYVKKHVIDYWNEVILPNVG EEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCC EEKNNLALLKKITEMIEEKYKEISKLAIKNYENLDVEIKTSKPRETIFREYMNEWMGAAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCHHH LIVFKRFVKNKSF HHHHHHHHHCCCC >Mature Secondary Structure SQEFQEGDNEIQSIVDFKKGYVYFLNNFQNIVGSFLQFLVTGLTEANKREILPFRKTLD CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH QELDKSQKKIKEIIFNLDEKHLFAQVRKDYSRYFSRHIEDNNRDDFIQFHLIFEMLRFFY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH IETKEGWEKLKAAVLENPFTDLEFQKNGLLNYRIVPALEKLNHLEILLRRMSFILQIDNP HHCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHEEEECCC NSLSEFKPTKPKYRDKTTYRLSAVFDESLYDKPKDLEPEDSGIEYKADEVIQNHQEKSKD CCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCH NWKVVKQKIKNEGEPNYIQAYGKYTWNSDQHYFFRYELDKYNAEKALFKTAISLDSHLGA HHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEECHHCHHHHHHHHHHHHHHCCCC DEQVLRSELIRSMTSIEKKGKSAEDFELEYQSFLKQFFTFCENIILMNMMLPTQFKYVFL CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE FHLGPSHFYMIAKKFLMEVNTGYVHARGSDGKKVIRLIPGEYVKKHVIDYWNEVILPNVG EEECCHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCC EEKNNLALLKKITEMIEEKYKEISKLAIKNYENLDVEIKTSKPRETIFREYMNEWMGAAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHCHHH LIVFKRFVKNKSF HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA