| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is flgK [H]
Identifier: 183222558
GI number: 183222558
Start: 3328840
End: 3330753
Strand: Reverse
Name: flgK [H]
Synonym: LEPBI_I3213
Alternate gene names: 183222558
Gene position: 3330753-3328840 (Counterclockwise)
Preceding gene: 183222559
Following gene: 183222557
Centisome position: 92.53
GC content: 42.42
Gene sequence:
>1914_bases ATGGGATCAACATTCCAAGGTATAGAAATCGGGAAACGAGGACTTTCGGTCCACCAACAAGCGATCCAAACCACAGGTCA TAATATTTCCAACGCGGATAACAAACATTATGCGCGCCAACGAGTTGTCATGAATAGTATGGATCCAATTTATGATCCAG CGTTTAACCGGGCAGAGGTGCCTGGCCAAATTGGACAAGGTGTCAAAATCTCTGAAATCGAAAGGGTTCGAGATAATTTT ATCGATGACCGTATCATCGATTCCTCTTCTCTCAAAGAGTATTGGGGCAAAAAAAATGATTATTTGTACCAAGTAGAAAC TGTTTTTAACGAACCTACTGGAACGACACTCAGGTCCATGATGGATCAGTTTTGGTCTTCATGGGAAGACCTTTCCAATT ACCCAGAAGAAACAGCCCACCGTGCCGTTGTACAGGAAAAAGCAGAAGCACTTGGTTCACGGATGGAAGATGTGTATAGA AAACTTTCCCTCCTCCGCGACCAATCCAATCGGGAAATTGAAGCGAAAGTCAATCATCTCAATACAGTTTCTGAAAATAT CAAATCACTCAATGAAAAAATTACCAAGTCACAAGCATTAGGTGACAATCCAAATGACCTTTTGGATAGAAGAGATGAAC TATTGCAAGAACTGGCAGGTATGGCGGACATTACCATCGGCCGTAGTGATGATGATGAACTCATGGTTTTTATTGGCCAA CAGATCCTCATCCAAGGACAAAAGGTTCACAAAATTGATTTGGTTGGGAATCCAAATAACGATGGGCTTTTGGATCTGAA GTGGTCAGGGACAGGTGACACTGTTCTCCTACGTCAGGGAAGTATCCAAGCTTTGTATGAAATCAGAGATCGGATCCTTG TCGAAAAAATTAATGCAGTCGATGCTCTCGCCATCAATGCAATGGATGTCATCAATGAAATCCACAAGGATGGATTTGGT TTAAATGGCAAAACCAATGTGAATTTCTTTGAACAAAGAGCTCTTGCGACAAACACCTTTGGAGAAATTGATACTGACGG GGATGGACTGAACGACAAAACAGCAGTGTTTCGAGTGACAGGTCGCACCTCCCTTGATCCCGATCGCCCGATTGGAATCT CGGGCACCATGCGTTTTCTCAAAGCAAGTCCTGGTGGAGAAACAGAAATACTCGTACCGTATTCCAAAGATGATACCTTA AATGCCGTTATCAAACGAATCAATCGATCGGAAACTGGTGTTGTCGCTTACATGTCGCATGACAATCAGTTGGCGCTAAA ATCGACAACAAATCCAAACGATAAAAAAGAAAACTTTATGATCCGTCACTTAGAGGATTCTGGAGAACTTCTTGTGGGAC TCACTGGCATTCTAACAGCCTCTGGTGTGTCTGGATCTTTTGATTACCGTAAAATTGGTGAAATAAATAAATTCCAAGCG AATGCCCAAGACATCACACTCACACCAATGTACCACCCATCTTCTTTTTTTAAGATGTCAGAAGATGTAAGGAATAACCC AGCAAACATTGCCGCTGGTCGCGGTAAGGATGTGAACGGGTCTGGTGATTACAATTCACCAAACGGTCAAAAAGATGGAT CCAATGCTCTCCTAATCGCAGCAGCACTACGTGAAAAACCAGTGATGTTTGATTATTCGAAAACAACGGATGATTTTTAC AACTCACTCATCTCAAGGCTTGGAACAGAAGCACGCGAAGCCAAACAAGAGTATACCACCCAAAATGAACTTATGGTGGA ACTCGAAAACATGCGCCAATCCGTGATGGGTGTGAATTTAGATGAGGAGATGGCCAATATGGTGCAGTTCCAACAATCCT ATAATGCATCCGCTCGTATGATTTCAACGCTGAATGAAATGTTAGATACCATCATCAATAGGTTAGGTGTATAA
Upstream 100 bases:
>100_bases ATCTCGTGAGAAGGTGTACACTTCGCACAAACAACCAACAAGGCGTGGGCAGAGCCAAAAAGGCGCGATCATTTTGAACG CGACTGCCTAGGAGAATCGT
Downstream 100 bases:
>100_bases TCATGATCAGAATCACTAACATGATGCAAAACAATTCCTTGGTGCGGAACCTAAACCGTCACCAAGTGGCGATGGATGAA ACCCAAACACAGCTGGGGAC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MGSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEVPGQIGQGVKISEIERVRDNF IDDRIIDSSSLKEYWGKKNDYLYQVETVFNEPTGTTLRSMMDQFWSSWEDLSNYPEETAHRAVVQEKAEALGSRMEDVYR KLSLLRDQSNREIEAKVNHLNTVSENIKSLNEKITKSQALGDNPNDLLDRRDELLQELAGMADITIGRSDDDELMVFIGQ QILIQGQKVHKIDLVGNPNNDGLLDLKWSGTGDTVLLRQGSIQALYEIRDRILVEKINAVDALAINAMDVINEIHKDGFG LNGKTNVNFFEQRALATNTFGEIDTDGDGLNDKTAVFRVTGRTSLDPDRPIGISGTMRFLKASPGGETEILVPYSKDDTL NAVIKRINRSETGVVAYMSHDNQLALKSTTNPNDKKENFMIRHLEDSGELLVGLTGILTASGVSGSFDYRKIGEINKFQA NAQDITLTPMYHPSSFFKMSEDVRNNPANIAAGRGKDVNGSGDYNSPNGQKDGSNALLIAAALREKPVMFDYSKTTDDFY NSLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNLDEEMANMVQFQQSYNASARMISTLNEMLDTIINRLGV
Sequences:
>Translated_637_residues MGSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEVPGQIGQGVKISEIERVRDNF IDDRIIDSSSLKEYWGKKNDYLYQVETVFNEPTGTTLRSMMDQFWSSWEDLSNYPEETAHRAVVQEKAEALGSRMEDVYR KLSLLRDQSNREIEAKVNHLNTVSENIKSLNEKITKSQALGDNPNDLLDRRDELLQELAGMADITIGRSDDDELMVFIGQ QILIQGQKVHKIDLVGNPNNDGLLDLKWSGTGDTVLLRQGSIQALYEIRDRILVEKINAVDALAINAMDVINEIHKDGFG LNGKTNVNFFEQRALATNTFGEIDTDGDGLNDKTAVFRVTGRTSLDPDRPIGISGTMRFLKASPGGETEILVPYSKDDTL NAVIKRINRSETGVVAYMSHDNQLALKSTTNPNDKKENFMIRHLEDSGELLVGLTGILTASGVSGSFDYRKIGEINKFQA NAQDITLTPMYHPSSFFKMSEDVRNNPANIAAGRGKDVNGSGDYNSPNGQKDGSNALLIAAALREKPVMFDYSKTTDDFY NSLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNLDEEMANMVQFQQSYNASARMISTLNEMLDTIINRLGV >Mature_636_residues GSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEVPGQIGQGVKISEIERVRDNFI DDRIIDSSSLKEYWGKKNDYLYQVETVFNEPTGTTLRSMMDQFWSSWEDLSNYPEETAHRAVVQEKAEALGSRMEDVYRK LSLLRDQSNREIEAKVNHLNTVSENIKSLNEKITKSQALGDNPNDLLDRRDELLQELAGMADITIGRSDDDELMVFIGQQ ILIQGQKVHKIDLVGNPNNDGLLDLKWSGTGDTVLLRQGSIQALYEIRDRILVEKINAVDALAINAMDVINEIHKDGFGL NGKTNVNFFEQRALATNTFGEIDTDGDGLNDKTAVFRVTGRTSLDPDRPIGISGTMRFLKASPGGETEILVPYSKDDTLN AVIKRINRSETGVVAYMSHDNQLALKSTTNPNDKKENFMIRHLEDSGELLVGLTGILTASGVSGSFDYRKIGEINKFQAN AQDITLTPMYHPSSFFKMSEDVRNNPANIAAGRGKDVNGSGDYNSPNGQKDGSNALLIAAALREKPVMFDYSKTTDDFYN SLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNLDEEMANMVQFQQSYNASARMISTLNEMLDTIINRLGV
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=368, Percent_Identity=24.7282608695652, Blast_Score=103, Evalue=4e-23,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR002371 - InterPro: IPR010810 [H]
Pfam domain/function: PF06429 DUF1078; PF07196 Flagellin_IN [H]
EC number: NA
Molecular weight: Translated: 71097; Mature: 70965
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEV CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC PGQIGQGVKISEIERVRDNFIDDRIIDSSSLKEYWGKKNDYLYQVETVFNEPTGTTLRSM CHHHCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH MDQFWSSWEDLSNYPEETAHRAVVQEKAEALGSRMEDVYRKLSLLRDQSNREIEAKVNHL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NTVSENIKSLNEKITKSQALGDNPNDLLDRRDELLQELAGMADITIGRSDDDELMVFIGQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECH QILIQGQKVHKIDLVGNPNNDGLLDLKWSGTGDTVLLRQGSIQALYEIRDRILVEKINAV HHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH DALAINAMDVINEIHKDGFGLNGKTNVNFFEQRALATNTFGEIDTDGDGLNDKTAVFRVT HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE GRTSLDPDRPIGISGTMRFLKASPGGETEILVPYSKDDTLNAVIKRINRSETGVVAYMSH CCCCCCCCCCCCCHHHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC DNQLALKSTTNPNDKKENFMIRHLEDSGELLVGLTGILTASGVSGSFDYRKIGEINKFQA CCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCHHHHCCCHHHCC NAQDITLTPMYHPSSFFKMSEDVRNNPANIAAGRGKDVNGSGDYNSPNGQKDGSNALLIA CCCCEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE AALREKPVMFDYSKTTDDFYNSLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNL EEHHCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DEEMANMVQFQQSYNASARMISTLNEMLDTIINRLGV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSTFQGIEIGKRGLSVHQQAIQTTGHNISNADNKHYARQRVVMNSMDPIYDPAFNRAEV CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC PGQIGQGVKISEIERVRDNFIDDRIIDSSSLKEYWGKKNDYLYQVETVFNEPTGTTLRSM CHHHCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHH MDQFWSSWEDLSNYPEETAHRAVVQEKAEALGSRMEDVYRKLSLLRDQSNREIEAKVNHL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH NTVSENIKSLNEKITKSQALGDNPNDLLDRRDELLQELAGMADITIGRSDDDELMVFIGQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECH QILIQGQKVHKIDLVGNPNNDGLLDLKWSGTGDTVLLRQGSIQALYEIRDRILVEKINAV HHHCCCCEEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH DALAINAMDVINEIHKDGFGLNGKTNVNFFEQRALATNTFGEIDTDGDGLNDKTAVFRVT HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE GRTSLDPDRPIGISGTMRFLKASPGGETEILVPYSKDDTLNAVIKRINRSETGVVAYMSH CCCCCCCCCCCCCHHHHHHEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC DNQLALKSTTNPNDKKENFMIRHLEDSGELLVGLTGILTASGVSGSFDYRKIGEINKFQA CCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCCCCCCCHHHHCCCHHHCC NAQDITLTPMYHPSSFFKMSEDVRNNPANIAAGRGKDVNGSGDYNSPNGQKDGSNALLIA CCCCEEEEECCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE AALREKPVMFDYSKTTDDFYNSLISRLGTEAREAKQEYTTQNELMVELENMRQSVMGVNL EEHHCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC DEEMANMVQFQQSYNASARMISTLNEMLDTIINRLGV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]