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The map label for this gene is senB [H]

Identifier: 183222546

GI number: 183222546

Start: 3316888

End: 3317778

Strand: Reverse

Name: senB [H]

Synonym: LEPBI_I3201

Alternate gene names: 183222546

Gene position: 3317778-3316888 (Counterclockwise)

Preceding gene: 183222547

Following gene: 183222545

Centisome position: 92.17

GC content: 34.9

Gene sequence:

>891_bases
ATGAAAATCCTTTTTGTAGACGACGAAGAAACAATCCGAGAATTGTTTTGGGAATACTTCAAAGACGAATTTAATGTCAC
ACTTGCCTCCGATGGGATGGAGGCACTTGCTATTTCTAATCAAAATACTTTTGATCTTATCATTTCAGATATCAGCTTAC
CAAAATTAAATGGAATCCAATTCATCCAAAAATTAAGAGCAGATGGAAATCAAACACCATTTCTCGTCATCACTGGTGAT
AGTGATATTCAAATTGCTATTGATGTATTTCGAATGGGGGCCGTGGACTTTTTCCTAAAACCCTTTCGGATGGAAGCTCT
CCGATCGCGAATCAAAAAATTTGAAAATGCTGATATTGACCTCACTTTACTTTATAATAGTGGAGAGATCACACAATTTA
GTGGTGATTGTAAAATTAAATTAAAACCTCAAATCAAAAAATTAACTTCTTATATTGCTTTTTTAACCAAACAAATTTTA
AATTCACCGCATGCTTCGACTGAAGATTTGATTTCGATCAAAATTGTATTGTATGAACTTTTGGCGAATGCTATTGAACA
TGGTGTCGCTGGAGTGAGTTATGCGGAAAAACAAGAATGTTTAGAATCTAATTTAGATTATTTTAAGTTTGTGGACGAAA
GGTGTGCGGACACCAATTCTTCTGTTTTTGTAGAGTTACTAATGGACGATGTCGGAGTGACAGTTGTGATTCGAGATGAA
GGGAATGGATTTGCTGTCAGTAGTATTCCCAATCCAATCGAAAATCCAAGTGCCAATTTGGTCAGTGGACGTGGGATTTT
TTTAGCCAAGATGAATATTGATTCTATTGTTTATAATGAAAAGGGCAATGAGGTACGTTTTTTCAAAACTTGGAATCGAA
TTGTACATTGA

Upstream 100 bases:

>100_bases
CATATAAATTAGGTCGTTCTTACAACCTGGAAGACTAATTTTCAAAAATAGATTTACAATTGTTATAGTTTAGGCATTCT
ATTTTCCTAAGCCATTTTTT

Downstream 100 bases:

>100_bases
AGTTTAGAAAAAAAGAAAGAATCAAGATACAAACTTTTCCGATACTATAAAAGATGAAGAAAATACTCCTGAAATATCGA
CATGGATTTCTTCTCATTTT

Product: putative two-component response regulator receiver

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKILFVDDEETIRELFWEYFKDEFNVTLASDGMEALAISNQNTFDLIISDISLPKLNGIQFIQKLRADGNQTPFLVITGD
SDIQIAIDVFRMGAVDFFLKPFRMEALRSRIKKFENADIDLTLLYNSGEITQFSGDCKIKLKPQIKKLTSYIAFLTKQIL
NSPHASTEDLISIKIVLYELLANAIEHGVAGVSYAEKQECLESNLDYFKFVDERCADTNSSVFVELLMDDVGVTVVIRDE
GNGFAVSSIPNPIENPSANLVSGRGIFLAKMNIDSIVYNEKGNEVRFFKTWNRIVH

Sequences:

>Translated_296_residues
MKILFVDDEETIRELFWEYFKDEFNVTLASDGMEALAISNQNTFDLIISDISLPKLNGIQFIQKLRADGNQTPFLVITGD
SDIQIAIDVFRMGAVDFFLKPFRMEALRSRIKKFENADIDLTLLYNSGEITQFSGDCKIKLKPQIKKLTSYIAFLTKQIL
NSPHASTEDLISIKIVLYELLANAIEHGVAGVSYAEKQECLESNLDYFKFVDERCADTNSSVFVELLMDDVGVTVVIRDE
GNGFAVSSIPNPIENPSANLVSGRGIFLAKMNIDSIVYNEKGNEVRFFKTWNRIVH
>Mature_296_residues
MKILFVDDEETIRELFWEYFKDEFNVTLASDGMEALAISNQNTFDLIISDISLPKLNGIQFIQKLRADGNQTPFLVITGD
SDIQIAIDVFRMGAVDFFLKPFRMEALRSRIKKFENADIDLTLLYNSGEITQFSGDCKIKLKPQIKKLTSYIAFLTKQIL
NSPHASTEDLISIKIVLYELLANAIEHGVAGVSYAEKQECLESNLDYFKFVDERCADTNSSVFVELLMDDVGVTVVIRDE
GNGFAVSSIPNPIENPSANLVSGRGIFLAKMNIDSIVYNEKGNEVRFFKTWNRIVH

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787487, Length=103, Percent_Identity=36.8932038834951, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=29.9065420560748, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790437, Length=112, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786784, Length=115, Percent_Identity=31.304347826087, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788191, Length=117, Percent_Identity=29.9145299145299, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 33451; Mature: 33451

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFVDDEETIRELFWEYFKDEFNVTLASDGMEALAISNQNTFDLIISDISLPKLNGIQ
CEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEEEEECCCCCCCCHHH
FIQKLRADGNQTPFLVITGDSDIQIAIDVFRMGAVDFFLKPFRMEALRSRIKKFENADID
HHHHHHCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTLLYNSGEITQFSGDCKIKLKPQIKKLTSYIAFLTKQILNSPHASTEDLISIKIVLYEL
EEEEECCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LANAIEHGVAGVSYAEKQECLESNLDYFKFVDERCADTNSSVFVELLMDDVGVTVVIRDE
HHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEC
GNGFAVSSIPNPIENPSANLVSGRGIFLAKMNIDSIVYNEKGNEVRFFKTWNRIVH
CCCEEECCCCCCCCCCCCCEEECCEEEEEEECCCEEEECCCCCEEEEEEHHHHHCC
>Mature Secondary Structure
MKILFVDDEETIRELFWEYFKDEFNVTLASDGMEALAISNQNTFDLIISDISLPKLNGIQ
CEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCEEEEEECCCCCCCCHHH
FIQKLRADGNQTPFLVITGDSDIQIAIDVFRMGAVDFFLKPFRMEALRSRIKKFENADID
HHHHHHCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
LTLLYNSGEITQFSGDCKIKLKPQIKKLTSYIAFLTKQILNSPHASTEDLISIKIVLYEL
EEEEECCCCEEEECCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LANAIEHGVAGVSYAEKQECLESNLDYFKFVDERCADTNSSVFVELLMDDVGVTVVIRDE
HHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEEC
GNGFAVSSIPNPIENPSANLVSGRGIFLAKMNIDSIVYNEKGNEVRFFKTWNRIVH
CCCEEECCCCCCCCCCCCCEEECCEEEEEEECCCEEEECCCCCEEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]