| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222489
Identifier: 183222489
GI number: 183222489
Start: 3259075
End: 3260316
Strand: Reverse
Name: 183222489
Synonym: LEPBI_I3144
Alternate gene names: NA
Gene position: 3260316-3259075 (Counterclockwise)
Preceding gene: 183222490
Following gene: 183222488
Centisome position: 90.57
GC content: 31.64
Gene sequence:
>1242_bases ATGTATCTATATCAAAAAACATTCTTATTATTATGCACTGCTTTTGCATTTCCGTTATTTTCTCAAGATCTAAAATTGAA TCAGATTCTGGAACTTGCTGAGAAAAAAGCCGATTTAATTTTAGCCGGACAAAAAAAAGTAGAGGAAGCGGAATATTTAA AACGAAAAGCAGGGAAGTATAAAAATCCAAACCTTTCTTTAGATTATGGGAGAAGGCGTGCAAGCAATGAATCTGGCCCT GAGTATTCAGTTGGTATCAGTCAGGATTTTTACTATCCAGGCAAAAGGGATTTAAAAATTAAAATTGCAGATGACAACGA AAAGTATTTGTTAGCTGAGCTGGAACAAAGTAAATTAGAATACCGATTTAGTGTTATCAAGTTAGTATATTCATATTTGA TTGCAACAGAAAAGGCCGCTCATGTGAATGATCGAATCAAACGAATTTCACGTATAGAATCCTTAATTGAAAAGAAAGTT TTTGTTTCTCCAGAATCGAGAGTAGAGTTATTTTTAGTTCAAAATCGTTTATTAAATCTTCAAAAACATCTAATTGTATT AGAAAAAAATAAATCAATTGAATGGGAAAAATTAAATTTTTTCTTGGAATTAAAGAGCGAAGTCCTAATCATTTCTCCTT GGCTAAAGTCTCATACCCCATTTAAAAAAGATTTATTATTAGCAGAAATGTTTGAGAGAAATCCAATCCTCAGACTATCC AAATCAAAGATTCAACAGTGGAAAGATGAGACCGAGCTTGCCAAGTTAGATAAATTTTCAGATATAAAACTCCAAGGTTC ACTCGGAGAAGATAAATCGGGAGTTGCGAATCGTTTTTTTGATTTAGGTGTTACCTTTGCAATTCCTTCTTTGGATACAA ACGAGGATGTAGTCAAAAGTCTACAGGCTAAGACGAATTCAGAAAATTACCTTTTAAATCACCAAATTAAAATTTTAACG ACTCGTTTGAATTCAAGTTTGATTGAAAATGAATCTATCCATAAATCATTAGATCGATTTTCAATCGGAATGATACCCTC AATTGAACAAAAGTTGAATTTTGCAGATAATGAATTTAGCAAAGGTCGGATTGGTTTGATTAGTTATTTGGAGTTGGAAA CGCAGCTTCATGAAACTCATGAAGCTATTTATGATTATCAAATGCAGTTTGTTGAAAATTTGACAGAAATATTGTTTTTA ACCAATAATCCTGATTTTTTGGGAGTAGTAAATGTTAAGTAG
Upstream 100 bases:
>100_bases ATCTACCGAGCTTTATTCCCCTGTACATTTAACATATATTAAACTCCAAGTCTGAAAGTTAACTGAATCTTTTTTCAGTA TTTTTACTTGGAGTGATTAA
Downstream 100 bases:
>100_bases GTTTTCTCTAATGGTATCTTTTATTAAGAAAAAACATTTCATTGTTCCTCTTAGTAATTCTGAATCGTACATATTTCAAT ATCATGCTTTAAACTTACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MYLYQKTFLLLCTAFAFPLFSQDLKLNQILELAEKKADLILAGQKKVEEAEYLKRKAGKYKNPNLSLDYGRRRASNESGP EYSVGISQDFYYPGKRDLKIKIADDNEKYLLAELEQSKLEYRFSVIKLVYSYLIATEKAAHVNDRIKRISRIESLIEKKV FVSPESRVELFLVQNRLLNLQKHLIVLEKNKSIEWEKLNFFLELKSEVLIISPWLKSHTPFKKDLLLAEMFERNPILRLS KSKIQQWKDETELAKLDKFSDIKLQGSLGEDKSGVANRFFDLGVTFAIPSLDTNEDVVKSLQAKTNSENYLLNHQIKILT TRLNSSLIENESIHKSLDRFSIGMIPSIEQKLNFADNEFSKGRIGLISYLELETQLHETHEAIYDYQMQFVENLTEILFL TNNPDFLGVVNVK
Sequences:
>Translated_413_residues MYLYQKTFLLLCTAFAFPLFSQDLKLNQILELAEKKADLILAGQKKVEEAEYLKRKAGKYKNPNLSLDYGRRRASNESGP EYSVGISQDFYYPGKRDLKIKIADDNEKYLLAELEQSKLEYRFSVIKLVYSYLIATEKAAHVNDRIKRISRIESLIEKKV FVSPESRVELFLVQNRLLNLQKHLIVLEKNKSIEWEKLNFFLELKSEVLIISPWLKSHTPFKKDLLLAEMFERNPILRLS KSKIQQWKDETELAKLDKFSDIKLQGSLGEDKSGVANRFFDLGVTFAIPSLDTNEDVVKSLQAKTNSENYLLNHQIKILT TRLNSSLIENESIHKSLDRFSIGMIPSIEQKLNFADNEFSKGRIGLISYLELETQLHETHEAIYDYQMQFVENLTEILFL TNNPDFLGVVNVK >Mature_413_residues MYLYQKTFLLLCTAFAFPLFSQDLKLNQILELAEKKADLILAGQKKVEEAEYLKRKAGKYKNPNLSLDYGRRRASNESGP EYSVGISQDFYYPGKRDLKIKIADDNEKYLLAELEQSKLEYRFSVIKLVYSYLIATEKAAHVNDRIKRISRIESLIEKKV FVSPESRVELFLVQNRLLNLQKHLIVLEKNKSIEWEKLNFFLELKSEVLIISPWLKSHTPFKKDLLLAEMFERNPILRLS KSKIQQWKDETELAKLDKFSDIKLQGSLGEDKSGVANRFFDLGVTFAIPSLDTNEDVVKSLQAKTNSENYLLNHQIKILT TRLNSSLIENESIHKSLDRFSIGMIPSIEQKLNFADNEFSKGRIGLISYLELETQLHETHEAIYDYQMQFVENLTEILFL TNNPDFLGVVNVK
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47936; Mature: 47936
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLYQKTFLLLCTAFAFPLFSQDLKLNQILELAEKKADLILAGQKKVEEAEYLKRKAGKY CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCC KNPNLSLDYGRRRASNESGPEYSVGISQDFYYPGKRDLKIKIADDNEKYLLAELEQSKLE CCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHH YRFSVIKLVYSYLIATEKAAHVNDRIKRISRIESLIEKKVFVSPESRVELFLVQNRLLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHH QKHLIVLEKNKSIEWEKLNFFLELKSEVLIISPWLKSHTPFKKDLLLAEMFERNPILRLS HHEEEEEECCCCCCHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEC KSKIQQWKDETELAKLDKFSDIKLQGSLGEDKSGVANRFFDLGVTFAIPSLDTNEDVVKS HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHH LQAKTNSENYLLNHQIKILTTRLNSSLIENESIHKSLDRFSIGMIPSIEQKLNFADNEFS HHHCCCCCCEEEECEEEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC KGRIGLISYLELETQLHETHEAIYDYQMQFVENLTEILFLTNNPDFLGVVNVK CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECC >Mature Secondary Structure MYLYQKTFLLLCTAFAFPLFSQDLKLNQILELAEKKADLILAGQKKVEEAEYLKRKAGKY CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCC KNPNLSLDYGRRRASNESGPEYSVGISQDFYYPGKRDLKIKIADDNEKYLLAELEQSKLE CCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHH YRFSVIKLVYSYLIATEKAAHVNDRIKRISRIESLIEKKVFVSPESRVELFLVQNRLLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHHHHHH QKHLIVLEKNKSIEWEKLNFFLELKSEVLIISPWLKSHTPFKKDLLLAEMFERNPILRLS HHEEEEEECCCCCCHHHHHEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEC KSKIQQWKDETELAKLDKFSDIKLQGSLGEDKSGVANRFFDLGVTFAIPSLDTNEDVVKS HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHCCEEEEECCCCCCHHHHHH LQAKTNSENYLLNHQIKILTTRLNSSLIENESIHKSLDRFSIGMIPSIEQKLNFADNEFS HHHCCCCCCEEEECEEEEEEEHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCCCC KGRIGLISYLELETQLHETHEAIYDYQMQFVENLTEILFLTNNPDFLGVVNVK CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA