| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222474
Identifier: 183222474
GI number: 183222474
Start: 3241887
End: 3242390
Strand: Reverse
Name: 183222474
Synonym: LEPBI_I3128
Alternate gene names: NA
Gene position: 3242390-3241887 (Counterclockwise)
Preceding gene: 183222477
Following gene: 183222471
Centisome position: 90.07
GC content: 38.49
Gene sequence:
>504_bases TTGCGAGAGTTTTCTCTGCTTGTTGAGGAGAAAAGAACTAGGAAATCCCATCGGTTTGGTGAATTTATGTTAGTTATGGA GACTCTTCCCCCAACTCAATTCGCGTCCAAAACACTTCTCCTATTACGAGGCATTCCGGGTGCTGGTAAAACAACACTCG CCAATCAAATCGCAAAATCAAATAATGCACCTATCTTTTCGATCGATTCCTATTTTACAAATGAAAGGGGAGAATATCAT TTTGATTTCACCAAAAATCATTTGGCATACAAAGAATGTGAATCCAAAACCAAAGACGCATTGGAAAAGACAATCCCCTT TGTGATCGTAGACAATACATTCACATTAGAATGGGAAATGAAACCTTACGAAGATTTAGCGAAACACTATGGGTATTTGT ATTTTGTGGTAACTGTTGAGAACCGGCATGGGGGAGAGAATGTTCATCAGATTCCAGTGGATCAAATTGAGAAGATGAAG GCAAAGTTTAAGGTGATTTTGTAA
Upstream 100 bases:
>100_bases AAATAAAAGATACATTCCGAATATATGGATGAGTTTATACGCTTCGTATGACACAAAAGTCTCCTTTCACTCTCACAATT CTTTCAAAACTTCGTTTTCC
Downstream 100 bases:
>100_bases GAAATTTGGGCAAAAAAAAACCGTCACTTAACCAAAGCTAAGCGACGGTTTTTTGAACAAACTGAATTATCTCCAGTTGT TTGTTTTAGGTTTTGCGATG
Product: putative ATPase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MREFSLLVEEKRTRKSHRFGEFMLVMETLPPTQFASKTLLLLRGIPGAGKTTLANQIAKSNNAPIFSIDSYFTNERGEYH FDFTKNHLAYKECESKTKDALEKTIPFVIVDNTFTLEWEMKPYEDLAKHYGYLYFVVTVENRHGGENVHQIPVDQIEKMK AKFKVIL
Sequences:
>Translated_167_residues MREFSLLVEEKRTRKSHRFGEFMLVMETLPPTQFASKTLLLLRGIPGAGKTTLANQIAKSNNAPIFSIDSYFTNERGEYH FDFTKNHLAYKECESKTKDALEKTIPFVIVDNTFTLEWEMKPYEDLAKHYGYLYFVVTVENRHGGENVHQIPVDQIEKMK AKFKVIL >Mature_167_residues MREFSLLVEEKRTRKSHRFGEFMLVMETLPPTQFASKTLLLLRGIPGAGKTTLANQIAKSNNAPIFSIDSYFTNERGEYH FDFTKNHLAYKECESKTKDALEKTIPFVIVDNTFTLEWEMKPYEDLAKHYGYLYFVVTVENRHGGENVHQIPVDQIEKMK AKFKVIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI119226224, Length=138, Percent_Identity=34.7826086956522, Blast_Score=75, Evalue=3e-14, Organism=Homo sapiens, GI119226227, Length=88, Percent_Identity=43.1818181818182, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI7656971, Length=97, Percent_Identity=39.1752577319588, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI21357685, Length=148, Percent_Identity=28.3783783783784, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19428; Mature: 19428
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFSLLVEEKRTRKSHRFGEFMLVMETLPPTQFASKTLLLLRGIPGAGKTTLANQIAKS CCCHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHEEEEECCCCCCHHHHHHHHHHC NNAPIFSIDSYFTNERGEYHFDFTKNHLAYKECESKTKDALEKTIPFVIVDNTFTLEWEM CCCCEEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEC KPYEDLAKHYGYLYFVVTVENRHGGENVHQIPVDQIEKMKAKFKVIL CCHHHHHHHCCEEEEEEEEECCCCCCCCEECCHHHHHHHHHHEEECC >Mature Secondary Structure MREFSLLVEEKRTRKSHRFGEFMLVMETLPPTQFASKTLLLLRGIPGAGKTTLANQIAKS CCCHHHHHHHHHHHHHHCHHHEEEEEECCCCHHHHHHHEEEEECCCCCCHHHHHHHHHHC NNAPIFSIDSYFTNERGEYHFDFTKNHLAYKECESKTKDALEKTIPFVIVDNTFTLEWEM CCCCEEEEHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEEC KPYEDLAKHYGYLYFVVTVENRHGGENVHQIPVDQIEKMKAKFKVIL CCHHHHHHHCCEEEEEEEEECCCCCCCCEECCHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA