| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222456
Identifier: 183222456
GI number: 183222456
Start: 3226264
End: 3226602
Strand: Direct
Name: 183222456
Synonym: LEPBI_I3110
Alternate gene names: NA
Gene position: 3226264-3226602 (Clockwise)
Preceding gene: 183222455
Following gene: 183222457
Centisome position: 89.63
GC content: 34.22
Gene sequence:
>339_bases ATGAATTTTATCAAAACTTTATTTTTAGTATTCCTTCTTTCCTTTTTTACCAATTGTCAATCGGGTCCATTCCCTGCATT TATCTATCAATACTCCACTCAACATATGATAGGTGATTCGACAGGAAACAATCTTACCTCAGCAAAGATTGTGAAATTTG GTAAATCTTGTTCATTGTCAGGTTATATCATTAATGTTTTTTACTATGGTGCAGGGAATTCGATTGAGGAAGCGACAAGG AATGGAAACATCCAAAAAGTAGCGTTAGTCGATCGAGAATCCCTTTCGATTCTAGGAACATTATTCTATAGAGAATGTAT TGTAGTTTGGGGTGAATAA
Upstream 100 bases:
>100_bases AAAAATGGAATCACAAAAATTGCAACCATTGACCATTCCACCTTCAGTTTGTTTAGCGGACTTATCCGAAATTATTGTAC CTTTGTTGTAGGCGAATAAC
Downstream 100 bases:
>100_bases ATTGTATTTACCAAGACGAATGCGAATTAAATATACTCTACTCGTATTCTGTTTATTTTTAGGGAGTAACCTCACTACTT TACTCTCTAAAGAGACAGAC
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MNFIKTLFLVFLLSFFTNCQSGPFPAFIYQYSTQHMIGDSTGNNLTSAKIVKFGKSCSLSGYIINVFYYGAGNSIEEATR NGNIQKVALVDRESLSILGTLFYRECIVVWGE
Sequences:
>Translated_112_residues MNFIKTLFLVFLLSFFTNCQSGPFPAFIYQYSTQHMIGDSTGNNLTSAKIVKFGKSCSLSGYIINVFYYGAGNSIEEATR NGNIQKVALVDRESLSILGTLFYRECIVVWGE >Mature_112_residues MNFIKTLFLVFLLSFFTNCQSGPFPAFIYQYSTQHMIGDSTGNNLTSAKIVKFGKSCSLSGYIINVFYYGAGNSIEEATR NGNIQKVALVDRESLSILGTLFYRECIVVWGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12518; Mature: 12518
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIKTLFLVFLLSFFTNCQSGPFPAFIYQYSTQHMIGDSTGNNLTSAKIVKFGKSCSLS CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCC GYIINVFYYGAGNSIEEATRNGNIQKVALVDRESLSILGTLFYRECIVVWGE EEEEEEEEECCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNFIKTLFLVFLLSFFTNCQSGPFPAFIYQYSTQHMIGDSTGNNLTSAKIVKFGKSCSLS CCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCC GYIINVFYYGAGNSIEEATRNGNIQKVALVDRESLSILGTLFYRECIVVWGE EEEEEEEEECCCCCHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA