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The map label for this gene is ysgA [C]

Identifier: 183222448

GI number: 183222448

Start: 3217387

End: 3218193

Strand: Reverse

Name: ysgA [C]

Synonym: LEPBI_I3102

Alternate gene names: 183222448

Gene position: 3218193-3217387 (Counterclockwise)

Preceding gene: 183222450

Following gene: 183222441

Centisome position: 89.4

GC content: 37.3

Gene sequence:

>807_bases
ATGAAACTGTTCCTTTCCACATCGATTGCATTGTTATTATTGCAATGTAGTAGTCTGCCCACAGCAGAACTTCCAGTTCA
ATCAACTGTAACTGGTAGCCCTTTCGAATACAAATTGGATGGAAAAACCTATGAAGGTTTTTTTGCTTTAAATTCAAAAA
CAACTGGAAAACGACCTGGTATCCTAGTGATACATGAGTGGTGGGGAGTCAATGATTATCCAAAACAACGAGCAAAACAA
TTAGCGGACATGGGATATGTAGCGTTTGTTATGGATGTTTATGGAAAAGGCATTTTAGCAAAGGATCATGTGGAAGCGGG
TAAACTTTCAAGTGCAAATGGTGATCCCAAAATTCTTCTTAAAAAAATCTACAAGGCGATTGAAATTCTAAAATCAAATC
CAAACGTCGATCCAAATCAAATAGGAGCTATCGGTTATTGTTTTGGAGGTGGTGGAGTCATTGAACTCGCATTAGATGGA
GCAGAATTAAAAGGTGGAGTTGTTTCTTTCCATGGGTTTTTAGGGAGTAAAAATTTGGCTACAGGGGTTAAAAAATTAAA
AACAAAAGTTTTAGTCCATCATGGGGCAGATGATCCCTTTATTCCAAAAACTTCGGTCGAAACATTTGTGAAAACAATAA
CGGAAGCAAAAGCTCCTGTCACTTTTGTTTCTCATCCTGGTGCAGTTCATGGGTTCACAAGGCCTGGATCCGAAAAACAC
GGATTACCAGGCTTAGCTTATAATGAAAAAGCAGATTATGCTTCTTTTGAGAGCATGAAAGATTTTTTTGCAAAAAACTT
TAAATAA

Upstream 100 bases:

>100_bases
TTTTCCTCGTATTTTTCTGCTTTTAACTCCAAATTTCCATTCTAAGATTAGAAAAGATGATCTAAGAACATGAAATGATG
TTTTGATCAAAAGGAGATTT

Downstream 100 bases:

>100_bases
ACAATTGGTAGTACAAATAGGGTTAACCCACTAGCAGTGATTAATCCTCCAATGACAACGGTCGCTAATGGCCGTTGTAC
CTCTGCTCCTGGCGAGGTGC

Product: putative carboxymethylenebutenolidase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLFLSTSIALLLLQCSSLPTAELPVQSTVTGSPFEYKLDGKTYEGFFALNSKTTGKRPGILVIHEWWGVNDYPKQRAKQ
LADMGYVAFVMDVYGKGILAKDHVEAGKLSSANGDPKILLKKIYKAIEILKSNPNVDPNQIGAIGYCFGGGGVIELALDG
AELKGGVVSFHGFLGSKNLATGVKKLKTKVLVHHGADDPFIPKTSVETFVKTITEAKAPVTFVSHPGAVHGFTRPGSEKH
GLPGLAYNEKADYASFESMKDFFAKNFK

Sequences:

>Translated_268_residues
MKLFLSTSIALLLLQCSSLPTAELPVQSTVTGSPFEYKLDGKTYEGFFALNSKTTGKRPGILVIHEWWGVNDYPKQRAKQ
LADMGYVAFVMDVYGKGILAKDHVEAGKLSSANGDPKILLKKIYKAIEILKSNPNVDPNQIGAIGYCFGGGGVIELALDG
AELKGGVVSFHGFLGSKNLATGVKKLKTKVLVHHGADDPFIPKTSVETFVKTITEAKAPVTFVSHPGAVHGFTRPGSEKH
GLPGLAYNEKADYASFESMKDFFAKNFK
>Mature_268_residues
MKLFLSTSIALLLLQCSSLPTAELPVQSTVTGSPFEYKLDGKTYEGFFALNSKTTGKRPGILVIHEWWGVNDYPKQRAKQ
LADMGYVAFVMDVYGKGILAKDHVEAGKLSSANGDPKILLKKIYKAIEILKSNPNVDPNQIGAIGYCFGGGGVIELALDG
AELKGGVVSFHGFLGSKNLATGVKKLKTKVLVHHGADDPFIPKTSVETFVKTITEAKAPVTFVSHPGAVHGFTRPGSEKH
GLPGLAYNEKADYASFESMKDFFAKNFK

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532655, Length=246, Percent_Identity=37.3983739837398, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI17536419, Length=213, Percent_Identity=34.2723004694836, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17532653, Length=235, Percent_Identity=32.7659574468085, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI193204305, Length=211, Percent_Identity=35.0710900473934, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17536415, Length=209, Percent_Identity=27.7511961722488, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534829, Length=155, Percent_Identity=29.6774193548387, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 28926; Mature: 28926

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLSTSIALLLLQCSSLPTAELPVQSTVTGSPFEYKLDGKTYEGFFALNSKTTGKRPG
CEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCC
ILVIHEWWGVNDYPKQRAKQLADMGYVAFVMDVYGKGILAKDHVEAGKLSSANGDPKILL
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHH
KKIYKAIEILKSNPNVDPNQIGAIGYCFGGGGVIELALDGAELKGGVVSFHGFLGSKNLA
HHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCEEEEEECCCHHCCCEEEEEHHCCCCHHH
TGVKKLKTKVLVHHGADDPFIPKTSVETFVKTITEAKAPVTFVSHPGAVHGFTRPGSEKH
HHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
GLPGLAYNEKADYASFESMKDFFAKNFK
CCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLFLSTSIALLLLQCSSLPTAELPVQSTVTGSPFEYKLDGKTYEGFFALNSKTTGKRPG
CEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCCCC
ILVIHEWWGVNDYPKQRAKQLADMGYVAFVMDVYGKGILAKDHVEAGKLSSANGDPKILL
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHH
KKIYKAIEILKSNPNVDPNQIGAIGYCFGGGGVIELALDGAELKGGVVSFHGFLGSKNLA
HHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCEEEEEECCCHHCCCEEEEEHHCCCCHHH
TGVKKLKTKVLVHHGADDPFIPKTSVETFVKTITEAKAPVTFVSHPGAVHGFTRPGSEKH
HHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
GLPGLAYNEKADYASFESMKDFFAKNFK
CCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]