| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222438
Identifier: 183222438
GI number: 183222438
Start: 3204692
End: 3205675
Strand: Direct
Name: 183222438
Synonym: LEPBI_I3092
Alternate gene names: NA
Gene position: 3204692-3205675 (Clockwise)
Preceding gene: 183222437
Following gene: 183222439
Centisome position: 89.03
GC content: 39.53
Gene sequence:
>984_bases GTGGAAGAATTTTATTATAACCATGAAAATCTTTGGCACTACCTTTGTGGAGTGTATGAAGGGCCTGGAGGAGGTTTTGC CGCAACCCTTTACCATAATGGTGTCAAACTAATCACTCAAACAAAAAGTACATGGGATGCAGATCCAAACCTCTTTACCA TTGGCATTCGATCCGATCTTTTGAGTGGTTTTAATGGCCAATTGGATGAAGTTTTGGTTTATAACCGAGCTTTAAGCTTA AATGAAATCCAAGCCATGTCAGGTTATGATCCGAAACAAGTGACCACTTGGAATTCAAATCCAGCCACAAGTAGTTTGAA ACTCCACCTAAGTGCTGATAGCTTTTCAAATTTAACAAATTTTACCCCGATCACCACTTGGCATGATCGAAGTGGAAATG CTGCTTCTTTTTTTTCAGGAGGCACACCACCAACTTATAACAACGCAGGATTCAATGGCAAACCAACGGTAAACTTTAAC GCAGGCAATTCTGAATACTTGTTCCGGGGGAGTGCAGCAGGCATTCCTTCCAATAGTTCAACAATCTTTTTTGCCTTTAC TAGAACCTCTAATGCAAACGGAACATTATTTGAATCGGCAACGCCAGGAGTTTCTTATTACTTTGATGGTGATTTTGTCA GAATGGCAAAACCATCAGAAGGAATTGTAGGCTCTAGTACAATCCAACTCAACAATTTGAACTTTCCCTATTTAATCGCG GCAGAACAACTGACAGGAGTTAGTTTTGGATTTTTTTCAAGCGGATTCAGTGCCAGTACGACAACTGATGCCAGTAGAAC GTATTCTCAAAACAATCTCTACCTAGGTACTAACTCAACCACTTCTAGTTTTTTCCCAGGCAATGTGAGTGAAGTTTTGT ATTACAATGTGAGTCTTTCAAATGTAGGAAGGAATATTGTGTTTTGTTATCTATCTCAAAAGTACAATTTAGATTTAACA GCCGCATCGGTGTACTGCGATTGA
Upstream 100 bases:
>100_bases AAAAACTTTGAATTGGAATACACCTGAAGAAGAAATACGGGCGCTGGTGCGCTAGATTCTTGAACCTACCAAGTATTTTT TTTCCGGTTTTGCAAATGAT
Downstream 100 bases:
>100_bases AAGAGATTGATTGCAAACGAAGGTTTTTATTTCGGATTTATCCTTTTTTGGTGTTCTGCCTTTTTTGCATCCATTGTTCT ACAGAAAATCAACCTACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MEEFYYNHENLWHYLCGVYEGPGGGFAATLYHNGVKLITQTKSTWDADPNLFTIGIRSDLLSGFNGQLDEVLVYNRALSL NEIQAMSGYDPKQVTTWNSNPATSSLKLHLSADSFSNLTNFTPITTWHDRSGNAASFFSGGTPPTYNNAGFNGKPTVNFN AGNSEYLFRGSAAGIPSNSSTIFFAFTRTSNANGTLFESATPGVSYYFDGDFVRMAKPSEGIVGSSTIQLNNLNFPYLIA AEQLTGVSFGFFSSGFSASTTTDASRTYSQNNLYLGTNSTTSSFFPGNVSEVLYYNVSLSNVGRNIVFCYLSQKYNLDLT AASVYCD
Sequences:
>Translated_327_residues MEEFYYNHENLWHYLCGVYEGPGGGFAATLYHNGVKLITQTKSTWDADPNLFTIGIRSDLLSGFNGQLDEVLVYNRALSL NEIQAMSGYDPKQVTTWNSNPATSSLKLHLSADSFSNLTNFTPITTWHDRSGNAASFFSGGTPPTYNNAGFNGKPTVNFN AGNSEYLFRGSAAGIPSNSSTIFFAFTRTSNANGTLFESATPGVSYYFDGDFVRMAKPSEGIVGSSTIQLNNLNFPYLIA AEQLTGVSFGFFSSGFSASTTTDASRTYSQNNLYLGTNSTTSSFFPGNVSEVLYYNVSLSNVGRNIVFCYLSQKYNLDLT AASVYCD >Mature_327_residues MEEFYYNHENLWHYLCGVYEGPGGGFAATLYHNGVKLITQTKSTWDADPNLFTIGIRSDLLSGFNGQLDEVLVYNRALSL NEIQAMSGYDPKQVTTWNSNPATSSLKLHLSADSFSNLTNFTPITTWHDRSGNAASFFSGGTPPTYNNAGFNGKPTVNFN AGNSEYLFRGSAAGIPSNSSTIFFAFTRTSNANGTLFESATPGVSYYFDGDFVRMAKPSEGIVGSSTIQLNNLNFPYLIA AEQLTGVSFGFFSSGFSASTTTDASRTYSQNNLYLGTNSTTSSFFPGNVSEVLYYNVSLSNVGRNIVFCYLSQKYNLDLT AASVYCD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35623; Mature: 35623
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEFYYNHENLWHYLCGVYEGPGGGFAATLYHNGVKLITQTKSTWDADPNLFTIGIRSDL CCCEEECCCHHEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEHHHH LSGFNGQLDEVLVYNRALSLNEIQAMSGYDPKQVTTWNSNPATSSLKLHLSADSFSNLTN HCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC FTPITTWHDRSGNAASFFSGGTPPTYNNAGFNGKPTVNFNAGNSEYLFRGSAAGIPSNSS CCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC TIFFAFTRTSNANGTLFESATPGVSYYFDGDFVRMAKPSEGIVGSSTIQLNNLNFPYLIA EEEEEEEECCCCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCEEEE AEQLTGVSFGFFSSGFSASTTTDASRTYSQNNLYLGTNSTTSSFFPGNVSEVLYYNVSLS ECHHCCEEEEHHCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEHH NVGRNIVFCYLSQKYNLDLTAASVYCD HCCCEEEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MEEFYYNHENLWHYLCGVYEGPGGGFAATLYHNGVKLITQTKSTWDADPNLFTIGIRSDL CCCEEECCCHHEEEEEEEEECCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEEEHHHH LSGFNGQLDEVLVYNRALSLNEIQAMSGYDPKQVTTWNSNPATSSLKLHLSADSFSNLTN HCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCC FTPITTWHDRSGNAASFFSGGTPPTYNNAGFNGKPTVNFNAGNSEYLFRGSAAGIPSNSS CCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCC TIFFAFTRTSNANGTLFESATPGVSYYFDGDFVRMAKPSEGIVGSSTIQLNNLNFPYLIA EEEEEEEECCCCCCEEEECCCCCEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCEEEE AEQLTGVSFGFFSSGFSASTTTDASRTYSQNNLYLGTNSTTSSFFPGNVSEVLYYNVSLS ECHHCCEEEEHHCCCCCCCCCCCCHHEECCCCEEEECCCCCCCCCCCCCCEEEEEEEEHH NVGRNIVFCYLSQKYNLDLTAASVYCD HCCCEEEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA