| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222427
Identifier: 183222427
GI number: 183222427
Start: 3190901
End: 3191620
Strand: Direct
Name: 183222427
Synonym: LEPBI_I3081
Alternate gene names: NA
Gene position: 3190901-3191620 (Clockwise)
Preceding gene: 183222425
Following gene: 183222428
Centisome position: 88.64
GC content: 42.5
Gene sequence:
>720_bases ATGCGTACCTCGTTTGTCTTAATTTTTACCTTCCTCTTCACCGTGGGTCTATTTGCCGCGGATGAAAAAAATGAATCTGT GAGCCAATCAGATGCAACCAAACTGAATCCAGATGGAAGCATCGCTCTCATTCCCTATAATGCAAAACAACAGCAGAAAA TCGAAAGGATTGGCAAAGAAGTGGATGATTACCATGCCATGATCAACGAGAAGGTGAAATTCCTCAGTTTTGAGAAAAAA ATCAAAGACAGTCGGTATGGACAGGTCACGAGTGCTCGGGAAATCCATTTGCCTTATGAACCAAGTTATGTCATGCACAG CCGTTTTGTGATGAAACTGAAAGGTGGTGGCGGAGCAGAAGGCGGTGGATTTTCATTAGATGAAATCTCCTTTTGGTCAA GGAAATCACTCACGGAAAAAGGGAAAGACCCTGTCACAACTTACCGTGAATTAAAAAACAATACTACGGGTGGAGTCAAA GGGCTTGTACTTTCTGTTCGCACGGTTACGAATGCGGATGATAACACACTGAACTTTGAATTGGAAAAAATCCAAAGCCC TTGGGAAAGACTTCGATTGGCAACCGCCTACCGAGACAGACTCCGTGAAGTGGCAAGAACCATTGACCGTTACATCCAAG CAAAAGGAAATTTAGAAACAAAAATGATTTCTGATACTGTTATGGAAGTCTCTGTGAGTGGAGATTTCGAAGAACCTTAA
Upstream 100 bases:
>100_bases TCCTGTTTTTACGTTTTTTATTCAACCTTATTTTTAACAAATTAATGATTTCATTTCAAAAGTCGAAAATAGATATAGAG TCTACTATCTGGGAGTTCGT
Downstream 100 bases:
>100_bases TCGGAATTTGGTGGGATTTCATTTTTAAATGCCACCACTCCATACAAACCTTTACGAAGTTCTAGAGATTCCCTTTGGTG CTACGACGGAAGAAATTAAA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MRTSFVLIFTFLFTVGLFAADEKNESVSQSDATKLNPDGSIALIPYNAKQQQKIERIGKEVDDYHAMINEKVKFLSFEKK IKDSRYGQVTSAREIHLPYEPSYVMHSRFVMKLKGGGGAEGGGFSLDEISFWSRKSLTEKGKDPVTTYRELKNNTTGGVK GLVLSVRTVTNADDNTLNFELEKIQSPWERLRLATAYRDRLREVARTIDRYIQAKGNLETKMISDTVMEVSVSGDFEEP
Sequences:
>Translated_239_residues MRTSFVLIFTFLFTVGLFAADEKNESVSQSDATKLNPDGSIALIPYNAKQQQKIERIGKEVDDYHAMINEKVKFLSFEKK IKDSRYGQVTSAREIHLPYEPSYVMHSRFVMKLKGGGGAEGGGFSLDEISFWSRKSLTEKGKDPVTTYRELKNNTTGGVK GLVLSVRTVTNADDNTLNFELEKIQSPWERLRLATAYRDRLREVARTIDRYIQAKGNLETKMISDTVMEVSVSGDFEEP >Mature_239_residues MRTSFVLIFTFLFTVGLFAADEKNESVSQSDATKLNPDGSIALIPYNAKQQQKIERIGKEVDDYHAMINEKVKFLSFEKK IKDSRYGQVTSAREIHLPYEPSYVMHSRFVMKLKGGGGAEGGGFSLDEISFWSRKSLTEKGKDPVTTYRELKNNTTGGVK GLVLSVRTVTNADDNTLNFELEKIQSPWERLRLATAYRDRLREVARTIDRYIQAKGNLETKMISDTVMEVSVSGDFEEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27052; Mature: 27052
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSFVLIFTFLFTVGLFAADEKNESVSQSDATKLNPDGSIALIPYNAKQQQKIERIGKE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHH VDDYHAMINEKVKFLSFEKKIKDSRYGQVTSAREIHLPYEPSYVMHSRFVMKLKGGGGAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCEEEEEECCCCCCC GGGFSLDEISFWSRKSLTEKGKDPVTTYRELKNNTTGGVKGLVLSVRTVTNADDNTLNFE CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEEEEEEEECCCCCCEEEEE LEKIQSPWERLRLATAYRDRLREVARTIDRYIQAKGNLETKMISDTVMEVSVSGDFEEP HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEECCCCCCC >Mature Secondary Structure MRTSFVLIFTFLFTVGLFAADEKNESVSQSDATKLNPDGSIALIPYNAKQQQKIERIGKE CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEECCCHHHHHHHHHHHH VDDYHAMINEKVKFLSFEKKIKDSRYGQVTSAREIHLPYEPSYVMHSRFVMKLKGGGGAE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHCEEEEEECCCCCCC GGGFSLDEISFWSRKSLTEKGKDPVTTYRELKNNTTGGVKGLVLSVRTVTNADDNTLNFE CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHEEEEEEEEECCCCCCEEEEE LEKIQSPWERLRLATAYRDRLREVARTIDRYIQAKGNLETKMISDTVMEVSVSGDFEEP HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA