| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222402
Identifier: 183222402
GI number: 183222402
Start: 3168393
End: 3169208
Strand: Direct
Name: 183222402
Synonym: LEPBI_I3056
Alternate gene names: NA
Gene position: 3168393-3169208 (Clockwise)
Preceding gene: 183222401
Following gene: 183222405
Centisome position: 88.02
GC content: 44.73
Gene sequence:
>816_bases ATGCTCCGTAAGCTACTTACATTTCAGTTTCCTAAATCATTTTCTTTTGCCATAGGGCTCACCCTCTTTTTTGGTTCCTT TCCAGTTCTTGTTGCAAACCCCGACCTACTTGAAGGAGATATCTACTACTACGATACCGTTGGTCAAAATCGGAGCCGAC CTCCCCAAAGGCCTCATCCCAACAACCTCCACGTGCCCACAATCCCCGCCAAACAAGAGATAACCGTTTTCTCGAATGCC GCGACAGACAAAACTGCATACCCTTACATCCAAACAGCCATTAACTTTGTGGAAGGCCATTTCTCCTTCAAAGCATTTTT GGCCGACGGCACTGAAGTCTCCTATTCCACTCGTGGAGAACATGTGCGTTACTCCAAATGTTTTGGCGAACTTTGTATCA TCATCTCCCAAAAAAATGTGTTAGGTGTGAGTAATACAAGCACCGAATGGGAAAAGGGCCATATCTTTGGAGAAGAACGT TACGAAGTGGCAGTGGGTCACAGGGCCGCCCTTGTGGCAAGTGATCGCAAACTCTACTTATACAATAGTTATACGAACCA TTGGGAAACCATTAGCCTCGAACAAGAAACCCTTCGTTCCTTTGCCAACCTCTATGATAAAGTGGCCATCATCACATCCC GCCGTATCCTTGTGATTGACCTTACCACCGAAGCCCAATTTGAACAAAACTTACTACTCCGTCGCATTTACCAATTTGAA TTGAGAGATGGCTTTATCAATTTTTACTCTGGTGATAAACTTTGGATGTTTCGCCACCAAACAGAGGCATTCGAAGAAGT GGATTTGACGGATTAA
Upstream 100 bases:
>100_bases CACCCATTTACATAACTATTCTCCGTCTAAGACGGAGAAATGGTTGTCGGAAGATAGCATCTAATCAAAATTCAATGGCA AGGAAGGAACAAACAGATCT
Downstream 100 bases:
>100_bases CCCTTCGGTAAACTCAGGGCAGGCCCTTCGGCACTTCGACATGCTAAAGGACAGAGACATTGATCAACTTAAGGTAAGAA TTTTTTTCCGAAAGGTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQNRSRPPQRPHPNNLHVPTIPAKQEITVFSNA ATDKTAYPYIQTAINFVEGHFSFKAFLADGTEVSYSTRGEHVRYSKCFGELCIIISQKNVLGVSNTSTEWEKGHIFGEER YEVAVGHRAALVASDRKLYLYNSYTNHWETISLEQETLRSFANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFE LRDGFINFYSGDKLWMFRHQTEAFEEVDLTD
Sequences:
>Translated_271_residues MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQNRSRPPQRPHPNNLHVPTIPAKQEITVFSNA ATDKTAYPYIQTAINFVEGHFSFKAFLADGTEVSYSTRGEHVRYSKCFGELCIIISQKNVLGVSNTSTEWEKGHIFGEER YEVAVGHRAALVASDRKLYLYNSYTNHWETISLEQETLRSFANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFE LRDGFINFYSGDKLWMFRHQTEAFEEVDLTD >Mature_271_residues MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQNRSRPPQRPHPNNLHVPTIPAKQEITVFSNA ATDKTAYPYIQTAINFVEGHFSFKAFLADGTEVSYSTRGEHVRYSKCFGELCIIISQKNVLGVSNTSTEWEKGHIFGEER YEVAVGHRAALVASDRKLYLYNSYTNHWETISLEQETLRSFANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFE LRDGFINFYSGDKLWMFRHQTEAFEEVDLTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31303; Mature: 31303
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQNRSRPPQRPHP CCCHHEEEECCCCCHHHHHHHHHHCCCCEEEECCCEEECCEEEEECCCCCCCCCCCCCCC NNLHVPTIPAKQEITVFSNAATDKTAYPYIQTAINFVEGHFSFKAFLADGTEVSYSTRGE CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCC HVRYSKCFGELCIIISQKNVLGVSNTSTEWEKGHIFGEERYEVAVGHRAALVASDRKLYL EEEHHHHHCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEE YNSYTNHWETISLEQETLRSFANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFE EECCCCCEEEEEECHHHHHHHHHHHHHEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHH LRDGFINFYSGDKLWMFRHQTEAFEEVDLTD HCCCEEEEECCCEEEEEECCCHHHHHCCCCC >Mature Secondary Structure MLRKLLTFQFPKSFSFAIGLTLFFGSFPVLVANPDLLEGDIYYYDTVGQNRSRPPQRPHP CCCHHEEEECCCCCHHHHHHHHHHCCCCEEEECCCEEECCEEEEECCCCCCCCCCCCCCC NNLHVPTIPAKQEITVFSNAATDKTAYPYIQTAINFVEGHFSFKAFLADGTEVSYSTRGE CCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCC HVRYSKCFGELCIIISQKNVLGVSNTSTEWEKGHIFGEERYEVAVGHRAALVASDRKLYL EEEHHHHHCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEECCEEEEEECCCEEEE YNSYTNHWETISLEQETLRSFANLYDKVAIITSRRILVIDLTTEAQFEQNLLLRRIYQFE EECCCCCEEEEEECHHHHHHHHHHHHHEEEEECCEEEEEEECCCHHHHHHHHHHHHHHHH LRDGFINFYSGDKLWMFRHQTEAFEEVDLTD HCCCEEEEECCCEEEEEECCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA