| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is luxQ [H]
Identifier: 183222354
GI number: 183222354
Start: 3119168
End: 3121543
Strand: Direct
Name: luxQ [H]
Synonym: LEPBI_I3007
Alternate gene names: 183222354
Gene position: 3119168-3121543 (Clockwise)
Preceding gene: 183222353
Following gene: 183222358
Centisome position: 86.65
GC content: 34.93
Gene sequence:
>2376_bases ATGCCGACTGATCCCTCCCTCGAAATTCAGATTCTATCCGATTTTGAGGACATTGTATTTTCAATTGGATACCCGAAATT AGAAATTCTGTATACGAGTCGATCGATCCAAACTTTGACAGGTTATGACAGCCAGTATTTTTTAGAAAATAAAACATCCT GGCAGAAATTCATTTATAAGGAAGATCGAAACTTAATCAAACATGCGTTAATTGCAATCCAAAACAATCAAAAATTTCGA CTCCGCTTAAGAATCATAACAAAAAATCAAAACATCAAGTACATTGAATGCCGAGGTAGATTGATTCATAATCAATCAAA TGGTTCGTACAGAATTGATGGGATTGTTACTGACATTTCTGACTTACTTCCTCTTTATCATTTATTTCAAGATGAATCCG TTGATATCAAACATTTGTTAATTGAAAACAATATGATTTTTAATGGATCACAAGATTCCATGTTTTTAATCGAAGTAAAA GATGATGATCAATATGTGATCCGTAGGATTAACTTAGCTTATGAAAGATCCACGGGAATCAAACTATCAATGATCCAAGG AAAAACTCCTATAGAGTTATTGGGTGAAGAACTTGGTGGAACAGTAATCAATAATTTCAAAAAGGCGATCCAATCTAAAA AAACTATCTCTTATGAAGAAAGTTTCACAATGCCCGCTGGAACAAAAATTTGGATTACGGAACTGACTCCTATTGAAGTA GAGGGCAAATATAAATACATTGTCGGTGCAAGTAAGGATATCACCGAACAAAAATTAGCCGAAAATGCACTTAAAGAATA TAATGAACGATATGCTTTGATTTTGGAAGCTAGCTCTGATGGTTGGTTTGATTGGGACTTAGTAAACAATACAGTGATTT ATTCCAGACGATGGTGGTTAGAATTTGGAAACGATGAAAAACCAGAAAATGTTCCCATTGATTACTGGCAAAGTTTAATC CATCCAGATGATGTTGGATGGGTCAGTGAATTTTTAGAAACTATTTTAGCCTCACAACGTGAAACCTTTGAATTTACGTT CCAGATGAAAAAAAGAAAAGGTAATTTTGCACATGTATTGTCAAAATGTTACATCCAAAGGGATGCCTCGGGCAACAAAA TTCGTTTACTTGGTTCAAATACAGATTTAACTGAAACAAAAAAAATCGAGTATACCCTTCGTTATGCAAAAGAATTAGCA GAAGCCGCAAACATTGCAAAGGGAAACTTTTTAGCAAATATGAGTCACGAAATTCGGACTCCATTAAATGGCATCATTGG ATTCACCGAACTTTTATTAAACTCTCCTTTACAAGAAGAACAAAAAGAATATTTGAAAAACATTTTCTTTTCAGGAAAAA GTTTATTAGAATTGGTGAATCAAATCTTAGACTTCTCTAAGATCGATTCTGGAAAACTTGAATTTGAATCGATTAACACT AATTTAATTGATTTGGTGCAATCAACCTTAGATTTGTTTCAAGTATCAGCGGCATCCAAAGGAATCGCATTACATATACA AATTGATCCAAATCTGCCAAAATATGTTTCGCTCGATCCACTTAGGATCAGACAGATTCTATCAAATTTAATCGGGAATG CCATTAAGTTCACCCATGAAGGATCCGTAAAAGTCTCTTTACAACAAATGGAGCGTAACGGTGATTATGTGACAATTTCA TTTGAGGTATCTGATACTGGAATTGGTATTGATATGAATGTAGGTTCTAGGCTATTCGATTCTTTTTCTCAAGCAGATAC TTCGATCACGAGAAAGTACGGTGGATCAGGACTTGGGCTCACGATCACAAATGAACTATTATTAAAAATGAATTCTAAAT TGACGATCCAAAGTGAACTAGGAAAGGGAAGCCAGTTTAGTTTTCCTTTGACACTGGAAGTCAAATCATCAGGCGAAAAT GCATCTTCTATTTTTGATGATAAACCTACTCAGAACCTCGAAACTAACTTAGTGCAAATTCCTGAGATCCAATCAGACAT TCTCATCGTTGAAGATAATGATTTGAATCGAAAACTTTTGACGAAACTGTTACAAAAAAAATATCCGAATTTAAAGTTAC GTTATGCGATTGATGGAATAGAAGCACTTGCGCAATTCCAATTTAAAGTTCCAGATTTGATCATAATGGATTTGCAAATG CCGATTATGGATGGATACACAGCAACCATTGAAATTCGAAGATTGGAAACCAATTCAAATAAAAAAACACCAATTGTCGC TTTGACAGCTGGTGCTTTTTATGCTGTAAAGGATTCTGCGATGGAATCGGGAATGGACGATTTTTTAACCAAACCCATTT CCGCATCCCATCTGTATGCGACTGTAGAAAAGTGGCTTCGGTTAGGCCGCGTGTAG
Upstream 100 bases:
>100_bases GTTTTTTACCATCGTTTGCTCTCCCATTTCTCATCCAAAATCGATCGGTTGGATTGTAAAACGCCAGTTTTCTTAACAAT TTTTTCGTCGCATGGAGGGT
Downstream 100 bases:
>100_bases TAGATATTCAAAAGCGCTGATTGCCGCCTTTGCCCCTTCTCCCATTGCAATGATAATTTGTTTGTAAGGTGTATTTGTCA CATCCCCACAAGCAAAGATT
Product: putative sensor kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 791; Mature: 790
Protein sequence:
>791_residues MPTDPSLEIQILSDFEDIVFSIGYPKLEILYTSRSIQTLTGYDSQYFLENKTSWQKFIYKEDRNLIKHALIAIQNNQKFR LRLRIITKNQNIKYIECRGRLIHNQSNGSYRIDGIVTDISDLLPLYHLFQDESVDIKHLLIENNMIFNGSQDSMFLIEVK DDDQYVIRRINLAYERSTGIKLSMIQGKTPIELLGEELGGTVINNFKKAIQSKKTISYEESFTMPAGTKIWITELTPIEV EGKYKYIVGASKDITEQKLAENALKEYNERYALILEASSDGWFDWDLVNNTVIYSRRWWLEFGNDEKPENVPIDYWQSLI HPDDVGWVSEFLETILASQRETFEFTFQMKKRKGNFAHVLSKCYIQRDASGNKIRLLGSNTDLTETKKIEYTLRYAKELA EAANIAKGNFLANMSHEIRTPLNGIIGFTELLLNSPLQEEQKEYLKNIFFSGKSLLELVNQILDFSKIDSGKLEFESINT NLIDLVQSTLDLFQVSAASKGIALHIQIDPNLPKYVSLDPLRIRQILSNLIGNAIKFTHEGSVKVSLQQMERNGDYVTIS FEVSDTGIGIDMNVGSRLFDSFSQADTSITRKYGGSGLGLTITNELLLKMNSKLTIQSELGKGSQFSFPLTLEVKSSGEN ASSIFDDKPTQNLETNLVQIPEIQSDILIVEDNDLNRKLLTKLLQKKYPNLKLRYAIDGIEALAQFQFKVPDLIIMDLQM PIMDGYTATIEIRRLETNSNKKTPIVALTAGAFYAVKDSAMESGMDDFLTKPISASHLYATVEKWLRLGRV
Sequences:
>Translated_791_residues MPTDPSLEIQILSDFEDIVFSIGYPKLEILYTSRSIQTLTGYDSQYFLENKTSWQKFIYKEDRNLIKHALIAIQNNQKFR LRLRIITKNQNIKYIECRGRLIHNQSNGSYRIDGIVTDISDLLPLYHLFQDESVDIKHLLIENNMIFNGSQDSMFLIEVK DDDQYVIRRINLAYERSTGIKLSMIQGKTPIELLGEELGGTVINNFKKAIQSKKTISYEESFTMPAGTKIWITELTPIEV EGKYKYIVGASKDITEQKLAENALKEYNERYALILEASSDGWFDWDLVNNTVIYSRRWWLEFGNDEKPENVPIDYWQSLI HPDDVGWVSEFLETILASQRETFEFTFQMKKRKGNFAHVLSKCYIQRDASGNKIRLLGSNTDLTETKKIEYTLRYAKELA EAANIAKGNFLANMSHEIRTPLNGIIGFTELLLNSPLQEEQKEYLKNIFFSGKSLLELVNQILDFSKIDSGKLEFESINT NLIDLVQSTLDLFQVSAASKGIALHIQIDPNLPKYVSLDPLRIRQILSNLIGNAIKFTHEGSVKVSLQQMERNGDYVTIS FEVSDTGIGIDMNVGSRLFDSFSQADTSITRKYGGSGLGLTITNELLLKMNSKLTIQSELGKGSQFSFPLTLEVKSSGEN ASSIFDDKPTQNLETNLVQIPEIQSDILIVEDNDLNRKLLTKLLQKKYPNLKLRYAIDGIEALAQFQFKVPDLIIMDLQM PIMDGYTATIEIRRLETNSNKKTPIVALTAGAFYAVKDSAMESGMDDFLTKPISASHLYATVEKWLRLGRV >Mature_790_residues PTDPSLEIQILSDFEDIVFSIGYPKLEILYTSRSIQTLTGYDSQYFLENKTSWQKFIYKEDRNLIKHALIAIQNNQKFRL RLRIITKNQNIKYIECRGRLIHNQSNGSYRIDGIVTDISDLLPLYHLFQDESVDIKHLLIENNMIFNGSQDSMFLIEVKD DDQYVIRRINLAYERSTGIKLSMIQGKTPIELLGEELGGTVINNFKKAIQSKKTISYEESFTMPAGTKIWITELTPIEVE GKYKYIVGASKDITEQKLAENALKEYNERYALILEASSDGWFDWDLVNNTVIYSRRWWLEFGNDEKPENVPIDYWQSLIH PDDVGWVSEFLETILASQRETFEFTFQMKKRKGNFAHVLSKCYIQRDASGNKIRLLGSNTDLTETKKIEYTLRYAKELAE AANIAKGNFLANMSHEIRTPLNGIIGFTELLLNSPLQEEQKEYLKNIFFSGKSLLELVNQILDFSKIDSGKLEFESINTN LIDLVQSTLDLFQVSAASKGIALHIQIDPNLPKYVSLDPLRIRQILSNLIGNAIKFTHEGSVKVSLQQMERNGDYVTISF EVSDTGIGIDMNVGSRLFDSFSQADTSITRKYGGSGLGLTITNELLLKMNSKLTIQSELGKGSQFSFPLTLEVKSSGENA SSIFDDKPTQNLETNLVQIPEIQSDILIVEDNDLNRKLLTKLLQKKYPNLKLRYAIDGIEALAQFQFKVPDLIIMDLQMP IMDGYTATIEIRRLETNSNKKTPIVALTAGAFYAVKDSAMESGMDDFLTKPISASHLYATVEKWLRLGRV
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788713, Length=437, Percent_Identity=35.4691075514874, Blast_Score=215, Evalue=1e-56, Organism=Escherichia coli, GI48994928, Length=419, Percent_Identity=32.9355608591885, Blast_Score=202, Evalue=8e-53, Organism=Escherichia coli, GI1789149, Length=279, Percent_Identity=41.2186379928315, Blast_Score=202, Evalue=9e-53, Organism=Escherichia coli, GI145693157, Length=252, Percent_Identity=36.1111111111111, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI87081816, Length=342, Percent_Identity=33.0409356725146, Blast_Score=155, Evalue=9e-39, Organism=Escherichia coli, GI1786600, Length=225, Percent_Identity=31.5555555555556, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786783, Length=259, Percent_Identity=28.1853281853282, Blast_Score=96, Evalue=9e-21, Organism=Escherichia coli, GI1788549, Length=312, Percent_Identity=24.0384615384615, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=26.1061946902655, Blast_Score=83, Evalue=7e-17, Organism=Escherichia coli, GI87082128, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1790436, Length=232, Percent_Identity=28.0172413793103, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790861, Length=240, Percent_Identity=27.9166666666667, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1787894, Length=224, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6322044, Length=74, Percent_Identity=44.5945945945946, Blast_Score=72, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6322000, Length=121, Percent_Identity=30.5785123966942, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 90123; Mature: 89992
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTDPSLEIQILSDFEDIVFSIGYPKLEILYTSRSIQTLTGYDSQYFLENKTSWQKFIYK CCCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHH EDRNLIKHALIAIQNNQKFRLRLRIITKNQNIKYIECRGRLIHNQSNGSYRIDGIVTDIS HHHHHHHHHHEEEECCCEEEEEEEEEECCCCEEEEEECCEEEEECCCCCEEEEEEHHHHH DLLPLYHLFQDESVDIKHLLIENNMIFNGSQDSMFLIEVKDDDQYVIRRINLAYERSTGI HHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCEEHHHHHHEEECCCCE KLSMIQGKTPIELLGEELGGTVINNFKKAIQSKKTISYEESFTMPAGTKIWITELTPIEV EEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEE EGKYKYIVGASKDITEQKLAENALKEYNERYALILEASSDGWFDWDLVNNTVIYSRRWWL CCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEEE EFGNDEKPENVPIDYWQSLIHPDDVGWVSEFLETILASQRETFEFTFQMKKRKGNFAHVL EECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHH SKCYIQRDASGNKIRLLGSNTDLTETKKIEYTLRYAKELAEAANIAKGNFLANMSHEIRT HHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCC PLNGIIGFTELLLNSPLQEEQKEYLKNIFFSGKSLLELVNQILDFSKIDSGKLEFESINT CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCC NLIDLVQSTLDLFQVSAASKGIALHIQIDPNLPKYVSLDPLRIRQILSNLIGNAIKFTHE HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHCCCCEEEEEC GSVKVSLQQMERNGDYVTISFEVSDTGIGIDMNVGSRLFDSFSQADTSITRKYGGSGLGL CCEEEEEEHHHCCCCEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEE TITNELLLKMNSKLTIQSELGKGSQFSFPLTLEVKSSGENASSIFDDKPTQNLETNLVQI EEECHHHHCCCCCEEEEHHCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCEEEC PEIQSDILIVEDNDLNRKLLTKLLQKKYPNLKLRYAIDGIEALAQFQFKVPDLIIMDLQM CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCEEEEEEEC PIMDGYTATIEIRRLETNSNKKTPIVALTAGAFYAVKDSAMESGMDDFLTKPISASHLYA CCCCCEEEEEEEEEEECCCCCCCCEEEEECCEEEEEEHHHHHCCCHHHHCCCCCHHHHHH TVEKWLRLGRV HHHHHHHHCCC >Mature Secondary Structure PTDPSLEIQILSDFEDIVFSIGYPKLEILYTSRSIQTLTGYDSQYFLENKTSWQKFIYK CCCCCEEEEEECCHHHHHHCCCCCEEEEEEECCCEEEEECCCCEEEECCCCHHHHHHHH EDRNLIKHALIAIQNNQKFRLRLRIITKNQNIKYIECRGRLIHNQSNGSYRIDGIVTDIS HHHHHHHHHHEEEECCCEEEEEEEEEECCCCEEEEEECCEEEEECCCCCEEEEEEHHHHH DLLPLYHLFQDESVDIKHLLIENNMIFNGSQDSMFLIEVKDDDQYVIRRINLAYERSTGI HHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCEEEEEECCCCCEEHHHHHHEEECCCCE KLSMIQGKTPIELLGEELGGTVINNFKKAIQSKKTISYEESFTMPAGTKIWITELTPIEV EEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCEEEE EGKYKYIVGASKDITEQKLAENALKEYNERYALILEASSDGWFDWDLVNNTVIYSRRWWL CCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCEEEEECCCEEEEEEEEEE EFGNDEKPENVPIDYWQSLIHPDDVGWVSEFLETILASQRETFEFTFQMKKRKGNFAHVL EECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHHH SKCYIQRDASGNKIRLLGSNTDLTETKKIEYTLRYAKELAEAANIAKGNFLANMSHEIRT HHHHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHCC PLNGIIGFTELLLNSPLQEEQKEYLKNIFFSGKSLLELVNQILDFSKIDSGKLEFESINT CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCC NLIDLVQSTLDLFQVSAASKGIALHIQIDPNLPKYVSLDPLRIRQILSNLIGNAIKFTHE HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHCCCCEEEEEC GSVKVSLQQMERNGDYVTISFEVSDTGIGIDMNVGSRLFDSFSQADTSITRKYGGSGLGL CCEEEEEEHHHCCCCEEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEE TITNELLLKMNSKLTIQSELGKGSQFSFPLTLEVKSSGENASSIFDDKPTQNLETNLVQI EEECHHHHCCCCCEEEEHHCCCCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCCEEEC PEIQSDILIVEDNDLNRKLLTKLLQKKYPNLKLRYAIDGIEALAQFQFKVPDLIIMDLQM CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCEEEEEEEC PIMDGYTATIEIRRLETNSNKKTPIVALTAGAFYAVKDSAMESGMDDFLTKPISASHLYA CCCCCEEEEEEEEEEECCCCCCCCEEEEECCEEEEEEHHHHHCCCHHHHCCCCCHHHHHH TVEKWLRLGRV HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]