| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222346
Identifier: 183222346
GI number: 183222346
Start: 3106119
End: 3107621
Strand: Direct
Name: 183222346
Synonym: LEPBI_I2999
Alternate gene names: NA
Gene position: 3106119-3107621 (Clockwise)
Preceding gene: 183222344
Following gene: 183222349
Centisome position: 86.29
GC content: 38.92
Gene sequence:
>1503_bases ATGTTTCGTTTTCTTTTGGCAATTTTTGTATTCCTTTTATTATCGTGTAAGCTCAACCTGAATAACCCTAATGATCCAAA GAACGAAGACTTTTGGGTGCGGACCGTTTTACAATCCTTCCTTTTAAATGATGGATGTAGGAATTTTTCTGCATGGGAAA GACGGTATGGAACTGGTTCTTATCTTACTTACGGAACCGATTTTCTATTTTTATCCAATGGTGACATCATCGTTGTTGGT TTTACCGAAGATCCAATCATTCCAGGGGATACAAAAGGGATCACGAGTGATTTTCAAGGAACACCTGGGTCAACATTGAA CTTATTCCTCCTTCGACTTTCTCGGAGCAATGGAGATATCATGTGGGTGGATTATTTAGGGCAAGGTTTTAGTAATTTAA ATTTTAATCCCCGATTACATCAGTTTACCAATGGGGATCTAGCGATCAGTTTTCTTGCCATTGGAAATGGAATTTCATTA CCGAATATGATCTCTGGAAAGGCGGATGCAAATAAATCCGTTTATTTGGGGAGGCATTCTACCAATGGAAATCGAATTTG GTATACTTATTTAGATTCATTAGATATCGACAATTACCTTGTCACCACTGTTGATTCATTTGATCAGTTTCATTTTTTTG TCACCTTAGTTGGAACGAATGGACATGCCAGTTTCCCTGAATTAACTGCTGTTACCAATTCGTCTCTTGGTTCCACTTCC GACACAGACATTTTGTCCGGAATTGTCAATGGAGAAGGATTAGGCCGATACCAAACTTATATCTCAAGTGCAAATAATGA TTTTGCATTCAATGTTACCTACGCCAATGGTTTTGTTTATCTGGCAGGGACAACCGCTGGAAGTATTTCTGGATCCACTC ATCCGAATCCAGGAACAGATAGACCTTTCATTACTAAGCTAAACGTAAACACAGGGAATCGTGAATTTCTAATATATAAT GGCCATTCCAGTGCATCGTATGGAGATAGCAGACAATTAATTGTCAGCCAAAATGCGATCTTACAATTGGTAACGACCAA TTTATCATGGAGCTCATTGGTGAGAGAACCAATGCAAAGTGATACAGAACATTATGCCTTCGCACAATATGATCTGAGTG GAAATTTACAGTGGTTATCTTTTCTTGGATCTGATCTTGGAGATATCGCAATCTTTGAAGAACCTCCTACGATCTTAGAT TTGACTACGGGTTTATGGAGAAATCGATCTAGAGTACCGAATACGATCAGTCGGTATTCTTCCGGATCGGCAGTTTCAAC AGGAGAAGGCTCCAGTACTTACCAAATAGCGGACGTTTACATCCAACCAAACAATGGTACCTTTGAAAAAATTCGGTATT CATCGAATTTGACAAGTCCAACAATCAAACGTACTGACCAGATGAAAGAGTTATGTACAGGTAAATTAGGATATATGGAT CGAATCTATACAACAGGAAGTACCACTCCTACACAACTAGGGATCCAAACCTCTTTGGAATGA
Upstream 100 bases:
>100_bases TTTTTTCAAATTTAAGAAAAGTACCCTACAAAAAAATGAAATCGTCTGTTGGCATAGTCAATTCAAACTTGGTAATATAA ATCACTTGGATCGATAGAAT
Downstream 100 bases:
>100_bases AGGTTCCTTCTGTTTAAAATTTCAGTGAGATGATTGGTTTTTTAGGATCAGAATTCGAGTCTAATCCGATTGACAAGAAT CTATTTTTTTCAACTCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MFRFLLAIFVFLLLSCKLNLNNPNDPKNEDFWVRTVLQSFLLNDGCRNFSAWERRYGTGSYLTYGTDFLFLSNGDIIVVG FTEDPIIPGDTKGITSDFQGTPGSTLNLFLLRLSRSNGDIMWVDYLGQGFSNLNFNPRLHQFTNGDLAISFLAIGNGISL PNMISGKADANKSVYLGRHSTNGNRIWYTYLDSLDIDNYLVTTVDSFDQFHFFVTLVGTNGHASFPELTAVTNSSLGSTS DTDILSGIVNGEGLGRYQTYISSANNDFAFNVTYANGFVYLAGTTAGSISGSTHPNPGTDRPFITKLNVNTGNREFLIYN GHSSASYGDSRQLIVSQNAILQLVTTNLSWSSLVREPMQSDTEHYAFAQYDLSGNLQWLSFLGSDLGDIAIFEEPPTILD LTTGLWRNRSRVPNTISRYSSGSAVSTGEGSSTYQIADVYIQPNNGTFEKIRYSSNLTSPTIKRTDQMKELCTGKLGYMD RIYTTGSTTPTQLGIQTSLE
Sequences:
>Translated_500_residues MFRFLLAIFVFLLLSCKLNLNNPNDPKNEDFWVRTVLQSFLLNDGCRNFSAWERRYGTGSYLTYGTDFLFLSNGDIIVVG FTEDPIIPGDTKGITSDFQGTPGSTLNLFLLRLSRSNGDIMWVDYLGQGFSNLNFNPRLHQFTNGDLAISFLAIGNGISL PNMISGKADANKSVYLGRHSTNGNRIWYTYLDSLDIDNYLVTTVDSFDQFHFFVTLVGTNGHASFPELTAVTNSSLGSTS DTDILSGIVNGEGLGRYQTYISSANNDFAFNVTYANGFVYLAGTTAGSISGSTHPNPGTDRPFITKLNVNTGNREFLIYN GHSSASYGDSRQLIVSQNAILQLVTTNLSWSSLVREPMQSDTEHYAFAQYDLSGNLQWLSFLGSDLGDIAIFEEPPTILD LTTGLWRNRSRVPNTISRYSSGSAVSTGEGSSTYQIADVYIQPNNGTFEKIRYSSNLTSPTIKRTDQMKELCTGKLGYMD RIYTTGSTTPTQLGIQTSLE >Mature_500_residues MFRFLLAIFVFLLLSCKLNLNNPNDPKNEDFWVRTVLQSFLLNDGCRNFSAWERRYGTGSYLTYGTDFLFLSNGDIIVVG FTEDPIIPGDTKGITSDFQGTPGSTLNLFLLRLSRSNGDIMWVDYLGQGFSNLNFNPRLHQFTNGDLAISFLAIGNGISL PNMISGKADANKSVYLGRHSTNGNRIWYTYLDSLDIDNYLVTTVDSFDQFHFFVTLVGTNGHASFPELTAVTNSSLGSTS DTDILSGIVNGEGLGRYQTYISSANNDFAFNVTYANGFVYLAGTTAGSISGSTHPNPGTDRPFITKLNVNTGNREFLIYN GHSSASYGDSRQLIVSQNAILQLVTTNLSWSSLVREPMQSDTEHYAFAQYDLSGNLQWLSFLGSDLGDIAIFEEPPTILD LTTGLWRNRSRVPNTISRYSSGSAVSTGEGSSTYQIADVYIQPNNGTFEKIRYSSNLTSPTIKRTDQMKELCTGKLGYMD RIYTTGSTTPTQLGIQTSLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55166; Mature: 55166
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFLLAIFVFLLLSCKLNLNNPNDPKNEDFWVRTVLQSFLLNDGCRNFSAWERRYGTGS CHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC YLTYGTDFLFLSNGDIIVVGFTEDPIIPGDTKGITSDFQGTPGSTLNLFLLRLSRSNGDI EEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCE MWVDYLGQGFSNLNFNPRLHQFTNGDLAISFLAIGNGISLPNMISGKADANKSVYLGRHS EEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC TNGNRIWYTYLDSLDIDNYLVTTVDSFDQFHFFVTLVGTNGHASFPELTAVTNSSLGSTS CCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCC DTDILSGIVNGEGLGRYQTYISSANNDFAFNVTYANGFVYLAGTTAGSISGSTHPNPGTD CHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC RPFITKLNVNTGNREFLIYNGHSSASYGDSRQLIVSQNAILQLVTTNLSWSSLVREPMQS CCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHC DTEHYAFAQYDLSGNLQWLSFLGSDLGDIAIFEEPPTILDLTTGLWRNRSRVPNTISRYS CCCCEEEEEEECCCCCHHHHHHCCCCCCEEEECCCCCEEEECHHHHCCCCCCCHHHHHCC SGSAVSTGEGSSTYQIADVYIQPNNGTFEKIRYSSNLTSPTIKRTDQMKELCTGKLGYMD CCCEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCE RIYTTGSTTPTQLGIQTSLE EEEECCCCCCCEECEEECCC >Mature Secondary Structure MFRFLLAIFVFLLLSCKLNLNNPNDPKNEDFWVRTVLQSFLLNDGCRNFSAWERRYGTGS CHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCCC YLTYGTDFLFLSNGDIIVVGFTEDPIIPGDTKGITSDFQGTPGSTLNLFLLRLSRSNGDI EEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCE MWVDYLGQGFSNLNFNPRLHQFTNGDLAISFLAIGNGISLPNMISGKADANKSVYLGRHS EEEEECCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEC TNGNRIWYTYLDSLDIDNYLVTTVDSFDQFHFFVTLVGTNGHASFPELTAVTNSSLGSTS CCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCEEEEECCCCCCCC DTDILSGIVNGEGLGRYQTYISSANNDFAFNVTYANGFVYLAGTTAGSISGSTHPNPGTD CHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC RPFITKLNVNTGNREFLIYNGHSSASYGDSRQLIVSQNAILQLVTTNLSWSSLVREPMQS CCEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHC DTEHYAFAQYDLSGNLQWLSFLGSDLGDIAIFEEPPTILDLTTGLWRNRSRVPNTISRYS CCCCEEEEEEECCCCCHHHHHHCCCCCCEEEECCCCCEEEECHHHHCCCCCCCHHHHHCC SGSAVSTGEGSSTYQIADVYIQPNNGTFEKIRYSSNLTSPTIKRTDQMKELCTGKLGYMD CCCEEECCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCE RIYTTGSTTPTQLGIQTSLE EEEECCCCCCCEECEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA