| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222338
Identifier: 183222338
GI number: 183222338
Start: 3097977
End: 3099500
Strand: Direct
Name: 183222338
Synonym: LEPBI_I2991
Alternate gene names: NA
Gene position: 3097977-3099500 (Clockwise)
Preceding gene: 183222337
Following gene: 183222339
Centisome position: 86.06
GC content: 40.16
Gene sequence:
>1524_bases ATGAATTCTATTTTATCGCTTTTTGTTTTTAGTGTTTTATTTTTCTTCTCTTGCAAACTCAATCTCAACAATCCAAGTGA TCCAACCTCACAAGACTATTTTCTAACAAATATTATGCGGTATTTTTTATTATCAGATCCGTGTTTGAATTTTAAGACAT GGAAAAAAACCTACGGGACAGGAACAAGTAAAACAACCGCTTCTGATCTTATCCTTCTTCCAAACGGTGATTATATTGTC TCGGGCATCACGAGACAATACATCATCGCTGGCTCACCAGAGGGAGTGACAAATAATTTTGCGGGAACGAATGGAACAAC TCTCAATACATTTTTAATGCGTATTTCCAAAGAAAATGGTGATATCCTTTGGGTGGATTATTTGGGAGAAGCAGTTAGCG AGGTCACTTATAAACCTAAATTAAGAAAATACTCCAATGGAGACATATCTGTTGCATTGATTGTGAAAGGTGCTGAACAA CCTGGAACACTCAATGCTAAATCAGGAGTTGGATCAGCTTCAGCTCTATTTGTAGGAAGGATTAGAGAAAGTGGAACACG CGTTTGGTTCACCTATTTAGATTCAGTCAGTATTGGTGAATACATCGTTTCCGCAATGGACACATCCAACCGTTTGCATG TGTTTATTGAAAATTCTGGAGGATCCCCCGCAAATTCGCCGTTTGTTGACGGACCCGCCATAAGTAATACATCTCTCGAT CCAGGAACAGATACCGATATGATCCACCTAGCAGTGAATGAAAATGGTGCTATGATTTTCCAACGTTATTTTACAAGTTC TGGAGGCGATTATATCTTTGGTGCTGAAGCCAACGCATCTGGACTTTTTGTGACAGGAACTTCGAGCCAAGGTAGCAACG GATCCATCCATCCTAACCCATCGTATCAAGTTCCATTTGTCATGAAATTGAATGAAACCGATGGAACACTCATTTGGTAT TCGTATCTTGGAACAAATGCCGAATTGGACTATGGTGCCTCTCGTTTTTTTCTGCAAGATGATTTTATCTATATGATTGG CTCAGGCCGTTACACCTATGGAATGCCTGCGGAACCCATCGTTGCCACTGATGGAACGAACAAACATTTTATTCTTACTA AATTAAATACAAGTGGTGCAACAATCTGGAATTCCTTTTTAGGCAATTCATCCGAGAATGTCATGGATACAACAGAATCA GAACCAATCCTTCTCTCTAACTCACAACTTTTAGTCAGAATGCAAACCACTGCAAGCAACGGCCAATTTAGTTCCGTGCC AGATGTGACCACAGGCAGTGGATCTGGTTCCTATACGTTAGCAGACGTTTTTATCAATCCACGATCGGGAACATTCGACA GGTTTCATTATACTTCCAACTTACCTTTGCCAGCAATGGAACAAACAGAGCGAATACGAGAAGTTTGTTCAGGAAAGATC GTTCGTCTCAATTATACTCGATTTACCACAACTCCACCGATTGAAGCCACGCAGATTTCCATTGAAAACACAAACCTTCC TTAA
Upstream 100 bases:
>100_bases TACGATAGAGTATACAAAATAGCGATCGAACTTTTAGAATGAAGTCATCCTTTGATTCCATGAGAAATTTCAGGAATTCA AATGTTATTTGAAGTAGACA
Downstream 100 bases:
>100_bases ATTCTTTTGAGTGGCGCCTCGCAATCGTTAGGTTGACAAACCTCTTCTCTACAAGCGACCGCGCTTTCCGCTCCAATCTT TCGCATTGCGAAAGGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MNSILSLFVFSVLFFFSCKLNLNNPSDPTSQDYFLTNIMRYFLLSDPCLNFKTWKKTYGTGTSKTTASDLILLPNGDYIV SGITRQYIIAGSPEGVTNNFAGTNGTTLNTFLMRISKENGDILWVDYLGEAVSEVTYKPKLRKYSNGDISVALIVKGAEQ PGTLNAKSGVGSASALFVGRIRESGTRVWFTYLDSVSIGEYIVSAMDTSNRLHVFIENSGGSPANSPFVDGPAISNTSLD PGTDTDMIHLAVNENGAMIFQRYFTSSGGDYIFGAEANASGLFVTGTSSQGSNGSIHPNPSYQVPFVMKLNETDGTLIWY SYLGTNAELDYGASRFFLQDDFIYMIGSGRYTYGMPAEPIVATDGTNKHFILTKLNTSGATIWNSFLGNSSENVMDTTES EPILLSNSQLLVRMQTTASNGQFSSVPDVTTGSGSGSYTLADVFINPRSGTFDRFHYTSNLPLPAMEQTERIREVCSGKI VRLNYTRFTTTPPIEATQISIENTNLP
Sequences:
>Translated_507_residues MNSILSLFVFSVLFFFSCKLNLNNPSDPTSQDYFLTNIMRYFLLSDPCLNFKTWKKTYGTGTSKTTASDLILLPNGDYIV SGITRQYIIAGSPEGVTNNFAGTNGTTLNTFLMRISKENGDILWVDYLGEAVSEVTYKPKLRKYSNGDISVALIVKGAEQ PGTLNAKSGVGSASALFVGRIRESGTRVWFTYLDSVSIGEYIVSAMDTSNRLHVFIENSGGSPANSPFVDGPAISNTSLD PGTDTDMIHLAVNENGAMIFQRYFTSSGGDYIFGAEANASGLFVTGTSSQGSNGSIHPNPSYQVPFVMKLNETDGTLIWY SYLGTNAELDYGASRFFLQDDFIYMIGSGRYTYGMPAEPIVATDGTNKHFILTKLNTSGATIWNSFLGNSSENVMDTTES EPILLSNSQLLVRMQTTASNGQFSSVPDVTTGSGSGSYTLADVFINPRSGTFDRFHYTSNLPLPAMEQTERIREVCSGKI VRLNYTRFTTTPPIEATQISIENTNLP >Mature_507_residues MNSILSLFVFSVLFFFSCKLNLNNPSDPTSQDYFLTNIMRYFLLSDPCLNFKTWKKTYGTGTSKTTASDLILLPNGDYIV SGITRQYIIAGSPEGVTNNFAGTNGTTLNTFLMRISKENGDILWVDYLGEAVSEVTYKPKLRKYSNGDISVALIVKGAEQ PGTLNAKSGVGSASALFVGRIRESGTRVWFTYLDSVSIGEYIVSAMDTSNRLHVFIENSGGSPANSPFVDGPAISNTSLD PGTDTDMIHLAVNENGAMIFQRYFTSSGGDYIFGAEANASGLFVTGTSSQGSNGSIHPNPSYQVPFVMKLNETDGTLIWY SYLGTNAELDYGASRFFLQDDFIYMIGSGRYTYGMPAEPIVATDGTNKHFILTKLNTSGATIWNSFLGNSSENVMDTTES EPILLSNSQLLVRMQTTASNGQFSSVPDVTTGSGSGSYTLADVFINPRSGTFDRFHYTSNLPLPAMEQTERIREVCSGKI VRLNYTRFTTTPPIEATQISIENTNLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55284; Mature: 55284
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSILSLFVFSVLFFFSCKLNLNNPSDPTSQDYFLTNIMRYFLLSDPCLNFKTWKKTYGT CCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCC GTSKTTASDLILLPNGDYIVSGITRQYIIAGSPEGVTNNFAGTNGTTLNTFLMRISKENG CCCCCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC DILWVDYLGEAVSEVTYKPKLRKYSNGDISVALIVKGAEQPGTLNAKSGVGSASALFVGR CEEEEHHHHHHHHHCCCCCCCEECCCCCEEEEEEEECCCCCCCEECCCCCCCCCEEEEEE IRESGTRVWFTYLDSVSIGEYIVSAMDTSNRLHVFIENSGGSPANSPFVDGPAISNTSLD ECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC PGTDTDMIHLAVNENGAMIFQRYFTSSGGDYIFGAEANASGLFVTGTSSQGSNGSIHPNP CCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCC SYQVPFVMKLNETDGTLIWYSYLGTNAELDYGASRFFLQDDFIYMIGSGRYTYGMPAEPI CCCCEEEEEECCCCCEEEEEEECCCCCEECCCCEEEEEECCEEEEEECCEEECCCCCCCE VATDGTNKHFILTKLNTSGATIWNSFLGNSSENVMDTTESEPILLSNSQLLVRMQTTASN EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCC GQFSSVPDVTTGSGSGSYTLADVFINPRSGTFDRFHYTSNLPLPAMEQTERIREVCSGKI CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCE VRLNYTRFTTTPPIEATQISIENTNLP EEEEEEEECCCCCCCEEEEEEECCCCC >Mature Secondary Structure MNSILSLFVFSVLFFFSCKLNLNNPSDPTSQDYFLTNIMRYFLLSDPCLNFKTWKKTYGT CCHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCC GTSKTTASDLILLPNGDYIVSGITRQYIIAGSPEGVTNNFAGTNGTTLNTFLMRISKENG CCCCCCCCCEEEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCC DILWVDYLGEAVSEVTYKPKLRKYSNGDISVALIVKGAEQPGTLNAKSGVGSASALFVGR CEEEEHHHHHHHHHCCCCCCCEECCCCCEEEEEEEECCCCCCCEECCCCCCCCCEEEEEE IRESGTRVWFTYLDSVSIGEYIVSAMDTSNRLHVFIENSGGSPANSPFVDGPAISNTSLD ECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCC PGTDTDMIHLAVNENGAMIFQRYFTSSGGDYIFGAEANASGLFVTGTSSQGSNGSIHPNP CCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCC SYQVPFVMKLNETDGTLIWYSYLGTNAELDYGASRFFLQDDFIYMIGSGRYTYGMPAEPI CCCCEEEEEECCCCCEEEEEEECCCCCEECCCCEEEEEECCEEEEEECCEEECCCCCCCE VATDGTNKHFILTKLNTSGATIWNSFLGNSSENVMDTTESEPILLSNSQLLVRMQTTASN EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCC GQFSSVPDVTTGSGSGSYTLADVFINPRSGTFDRFHYTSNLPLPAMEQTERIREVCSGKI CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCE VRLNYTRFTTTPPIEATQISIENTNLP EEEEEEEECCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA