| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222252
Identifier: 183222252
GI number: 183222252
Start: 2997358
End: 2998518
Strand: Direct
Name: 183222252
Synonym: LEPBI_I2903
Alternate gene names: NA
Gene position: 2997358-2998518 (Clockwise)
Preceding gene: 183222250
Following gene: 183222253
Centisome position: 83.27
GC content: 39.36
Gene sequence:
>1161_bases GTGGAGGACTCTGGTTGCAAAAAAATGAGTACAGACCGTTACAAACCAGGAATTTTAGAACAATGGGGGCGCCGAGTCCT CATTTCCTTCCGTTCGAACGCGAAAACCGACGAAACATTGCAGGTCAGTTTTTCCAAAGCTTCTAGAAGGTACCTTTTTT GGGGTGGATTTTGGTCGTTTTGGATTGGTTTTTTTCCTTCCATCGCCTTTGTTTATCTTTCCATTTACCTCCCTCCCTTT TCGTTGTATTCCTTTCCTTCTCTCTCTTACGAGGGATTATTTGGTTTCCTTAGTCTTCTAACGATTGTTACTGTAATAGA ATTTTACCTTCTCTTTCGATTAGGGTTTTATTTGTCCTACCAAATGGCGAAGGCTGCAGACATGGAACTTGCAGACGAAC CAGAACTCATCACTCCTATCCCCGGAATGATGGCAAGACTCGTTTTAGAAATCCCTGACCCAAGAATCCGTTTGTATGGA ATTGACCCTTACAAACATTTGAATGAAAGGGCATTATTCTTTCGAACCTTACTTTACAAAAGTAAGGTTTTTTTATCAAA TATCATCGCAAAACTTTTGTTAAAAGTGATATTAGGAAGAACAGGTTTACGTTTTATCATTGAATACATCTCAGGCCCCA TCACTGGGATTTGGGACGGAGTGACCACTTACATCATTTTATTAGAACTTAGGAAACGAATCATCACAAGAAAACTTGCC GATTCTATTTTACTCCAAATCAAATCTAAAAAAAGAAATCCTAATTTGATCGAATCGGTACTTCGCTCTGTTGCCCTTTC GATTGTGTACACCAAAACCTTCCATCCTAATTTTGAATATTTGCTCTTTGGTCTTCTTGGGCTTTTGTCTAAAAAAGAAC ATTTGCAAAACCTAGATGATTGGGATGCCTTTGTGGAATCCTTTCAATTGTTAAACGATGAGGAAAAAAAATGGCCCATT TCCGTTTTTGCCATTTGTTCCTCCTTCGATGGGAAATTAAATGTGGAAGAACTCCATGCATTTAGCGCACTCACTCACCT CTCCCCATCCTGGATTTTGGAACGAGTGCGGCATTTGAGTGAAACCATCCAAAATGGGGAACTTTCAGAATCTTTTCTTT GGATGGAAAAAATCCTTCCACAAGAAAGAAACTCTGAATAG
Upstream 100 bases:
>100_bases TGAGTAAAAAAATGGTCGTAACCCAATCGATGGGGTTTTTGACTTTGAATTCAGCTTGTGTCGTCATAGAAAATTCCTGT TCCATGGAGTGTGAGTCCCT
Downstream 100 bases:
>100_bases GATGAATCCTAGTCTAAAAGAAACATAGGAGAAAATATGGCACAAGTAACACTCAAAGGAAATCCCGTTCCTCTAGAAGG ATCCATCCCAAAACCTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MEDSGCKKMSTDRYKPGILEQWGRRVLISFRSNAKTDETLQVSFSKASRRYLFWGGFWSFWIGFFPSIAFVYLSIYLPPF SLYSFPSLSYEGLFGFLSLLTIVTVIEFYLLFRLGFYLSYQMAKAADMELADEPELITPIPGMMARLVLEIPDPRIRLYG IDPYKHLNERALFFRTLLYKSKVFLSNIIAKLLLKVILGRTGLRFIIEYISGPITGIWDGVTTYIILLELRKRIITRKLA DSILLQIKSKKRNPNLIESVLRSVALSIVYTKTFHPNFEYLLFGLLGLLSKKEHLQNLDDWDAFVESFQLLNDEEKKWPI SVFAICSSFDGKLNVEELHAFSALTHLSPSWILERVRHLSETIQNGELSESFLWMEKILPQERNSE
Sequences:
>Translated_386_residues MEDSGCKKMSTDRYKPGILEQWGRRVLISFRSNAKTDETLQVSFSKASRRYLFWGGFWSFWIGFFPSIAFVYLSIYLPPF SLYSFPSLSYEGLFGFLSLLTIVTVIEFYLLFRLGFYLSYQMAKAADMELADEPELITPIPGMMARLVLEIPDPRIRLYG IDPYKHLNERALFFRTLLYKSKVFLSNIIAKLLLKVILGRTGLRFIIEYISGPITGIWDGVTTYIILLELRKRIITRKLA DSILLQIKSKKRNPNLIESVLRSVALSIVYTKTFHPNFEYLLFGLLGLLSKKEHLQNLDDWDAFVESFQLLNDEEKKWPI SVFAICSSFDGKLNVEELHAFSALTHLSPSWILERVRHLSETIQNGELSESFLWMEKILPQERNSE >Mature_386_residues MEDSGCKKMSTDRYKPGILEQWGRRVLISFRSNAKTDETLQVSFSKASRRYLFWGGFWSFWIGFFPSIAFVYLSIYLPPF SLYSFPSLSYEGLFGFLSLLTIVTVIEFYLLFRLGFYLSYQMAKAADMELADEPELITPIPGMMARLVLEIPDPRIRLYG IDPYKHLNERALFFRTLLYKSKVFLSNIIAKLLLKVILGRTGLRFIIEYISGPITGIWDGVTTYIILLELRKRIITRKLA DSILLQIKSKKRNPNLIESVLRSVALSIVYTKTFHPNFEYLLFGLLGLLSKKEHLQNLDDWDAFVESFQLLNDEEKKWPI SVFAICSSFDGKLNVEELHAFSALTHLSPSWILERVRHLSETIQNGELSESFLWMEKILPQERNSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44814; Mature: 44814
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDSGCKKMSTDRYKPGILEQWGRRVLISFRSNAKTDETLQVSFSKASRRYLFWGGFWSF CCCCCCCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCCCEEEEEHHCCCCEEEECCHHHH WIGFFPSIAFVYLSIYLPPFSLYSFPSLSYEGLFGFLSLLTIVTVIEFYLLFRLGFYLSY HHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMAKAADMELADEPELITPIPGMMARLVLEIPDPRIRLYGIDPYKHLNERALFFRTLLYK HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH SKVFLSNIIAKLLLKVILGRTGLRFIIEYISGPITGIWDGVTTYIILLELRKRIITRKLA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DSILLQIKSKKRNPNLIESVLRSVALSIVYTKTFHPNFEYLLFGLLGLLSKKEHLQNLDD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCHH WDAFVESFQLLNDEEKKWPISVFAICSSFDGKLNVEELHAFSALTHLSPSWILERVRHLS HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH ETIQNGELSESFLWMEKILPQERNSE HHHCCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEDSGCKKMSTDRYKPGILEQWGRRVLISFRSNAKTDETLQVSFSKASRRYLFWGGFWSF CCCCCCCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCCCCEEEEEHHCCCCEEEECCHHHH WIGFFPSIAFVYLSIYLPPFSLYSFPSLSYEGLFGFLSLLTIVTVIEFYLLFRLGFYLSY HHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMAKAADMELADEPELITPIPGMMARLVLEIPDPRIRLYGIDPYKHLNERALFFRTLLYK HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH SKVFLSNIIAKLLLKVILGRTGLRFIIEYISGPITGIWDGVTTYIILLELRKRIITRKLA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DSILLQIKSKKRNPNLIESVLRSVALSIVYTKTFHPNFEYLLFGLLGLLSKKEHLQNLDD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCHH WDAFVESFQLLNDEEKKWPISVFAICSSFDGKLNVEELHAFSALTHLSPSWILERVRHLS HHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH ETIQNGELSESFLWMEKILPQERNSE HHHCCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA