| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222243
Identifier: 183222243
GI number: 183222243
Start: 2984317
End: 2985360
Strand: Direct
Name: 183222243
Synonym: LEPBI_I2894
Alternate gene names: NA
Gene position: 2984317-2985360 (Clockwise)
Preceding gene: 183222242
Following gene: 183222245
Centisome position: 82.91
GC content: 38.89
Gene sequence:
>1044_bases TTGGCGGTGCAATGGCGATCCCTTTCCATCAAAATCATTTTGTTTGGTTGTTTCACGATTGCGCAGGCAAACCCTCTTTT TGCGGAAGATTTTAAAACCCAACACTTCGCAGAGGAAGGGTATCTCCAAGGTTGGAATTTTACCTTTCGAAACGAAAAGT ACAATGTATTTGCTACCTTTTTAGTGAGTAATTTTGGACCAGGATCACTTAACAACGGCATATCGTTACTTTTAAAAGCA AAAGACCAACCTGTATTTTATTCCACCCGCGAGTTTGATGCAGATGAATATGAATTCAAAAAAGGAAAGTTTTACCAACG CAGTGGGGAAAACTGGATGGAATATAAAAACGGTATTTATTCCTTTTATATGAACTATGGGGATTGGGAAATCAAACTAG ACTACAAACCTCGCCGAGGCAATGTCCCGATTTCCCAAGGTAGATTTCCTTTGATGGAAAAAGGAAAATTCGTACAAGCA GACATTCCATTTTCTTACTCTTCTGTGACAGGCACCATTCGGTACAAAGATGTGATCGAAGAAGTGAAAGGAGTCGGAGG ATTGGAACACATCTTAACAAACGAAGCTGTGTACCAGTTTTCCAAAAAATGGGAGCTTGTCAGGTCGCGGACAAGTGATG GTTATCGAATTTTTACAGGTGGATTTCTTGGAAATTCCAACTTCCCTGGAGAGTTTTATCGAAGAGTGGCCGTACTCAAC CCATCTGGAAATTTAATTTTAGAAGGGACAGTGGAACGAGTAGAAGTTTTGGAATGGGAAAAGGAACCTACTTCCGGTTA TACGATTCCAAAATCAGAAATTTTATACTTCCAAAATGAAACATGTAAATTGAATGTCAAACGAACTCGTCCCATTGCCA CCATGAGTGCTTTGGAAAATATTTCGTCTTTTTTACGCTTTTTTATCCAATTGTTTTTTGCAAAACCTTACCAAATCCAT TGGATCGCAGAACTTAAGTTAGAGTGCCCAGAATATTCAGGAGAAGCAAAAGGTTACCATTCCAATTATTTAATCAATGA GTGA
Upstream 100 bases:
>100_bases GCCTCGGTGATCTGTATGGGATTTCCGTACCGACTCTTCTCTCCATTTAAAGGAAATCCCCAAGAAAAACCTTGCTTCTT TTTCTGGGTCGTTTTAGGAT
Downstream 100 bases:
>100_bases GTCAAAGATTGATTGATTCTTTCATTGAAAGACATTCCCAATCACTCGAAAATTGAGTCAAAGGGCCAAACCATTCTTTC TACAATATAAACTTTTGGCC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAVQWRSLSIKIILFGCFTIAQANPLFAEDFKTQHFAEEGYLQGWNFTFRNEKYNVFATFLVSNFGPGSLNNGISLLLKA KDQPVFYSTREFDADEYEFKKGKFYQRSGENWMEYKNGIYSFYMNYGDWEIKLDYKPRRGNVPISQGRFPLMEKGKFVQA DIPFSYSSVTGTIRYKDVIEEVKGVGGLEHILTNEAVYQFSKKWELVRSRTSDGYRIFTGGFLGNSNFPGEFYRRVAVLN PSGNLILEGTVERVEVLEWEKEPTSGYTIPKSEILYFQNETCKLNVKRTRPIATMSALENISSFLRFFIQLFFAKPYQIH WIAELKLECPEYSGEAKGYHSNYLINE
Sequences:
>Translated_347_residues MAVQWRSLSIKIILFGCFTIAQANPLFAEDFKTQHFAEEGYLQGWNFTFRNEKYNVFATFLVSNFGPGSLNNGISLLLKA KDQPVFYSTREFDADEYEFKKGKFYQRSGENWMEYKNGIYSFYMNYGDWEIKLDYKPRRGNVPISQGRFPLMEKGKFVQA DIPFSYSSVTGTIRYKDVIEEVKGVGGLEHILTNEAVYQFSKKWELVRSRTSDGYRIFTGGFLGNSNFPGEFYRRVAVLN PSGNLILEGTVERVEVLEWEKEPTSGYTIPKSEILYFQNETCKLNVKRTRPIATMSALENISSFLRFFIQLFFAKPYQIH WIAELKLECPEYSGEAKGYHSNYLINE >Mature_346_residues AVQWRSLSIKIILFGCFTIAQANPLFAEDFKTQHFAEEGYLQGWNFTFRNEKYNVFATFLVSNFGPGSLNNGISLLLKAK DQPVFYSTREFDADEYEFKKGKFYQRSGENWMEYKNGIYSFYMNYGDWEIKLDYKPRRGNVPISQGRFPLMEKGKFVQAD IPFSYSSVTGTIRYKDVIEEVKGVGGLEHILTNEAVYQFSKKWELVRSRTSDGYRIFTGGFLGNSNFPGEFYRRVAVLNP SGNLILEGTVERVEVLEWEKEPTSGYTIPKSEILYFQNETCKLNVKRTRPIATMSALENISSFLRFFIQLFFAKPYQIHW IAELKLECPEYSGEAKGYHSNYLINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40308; Mature: 40177
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQWRSLSIKIILFGCFTIAQANPLFAEDFKTQHFAEEGYLQGWNFTFRNEKYNVFATF CCEEEEEEEEEEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCEEEEEEE LVSNFGPGSLNNGISLLLKAKDQPVFYSTREFDADEYEFKKGKFYQRSGENWMEYKNGIY EECCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHCCCCCCEEECCCCCHHHHCCCEE SFYMNYGDWEIKLDYKPRRGNVPISQGRFPLMEKGKFVQADIPFSYSSVTGTIRYKDVIE EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEHHHHHH EVKGVGGLEHILTNEAVYQFSKKWELVRSRTSDGYRIFTGGFLGNSNFPGEFYRRVAVLN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHEEEEEEEC PSGNLILEGTVERVEVLEWEKEPTSGYTIPKSEILYFQNETCKLNVKRTRPIATMSALEN CCCCEEEECCHHEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHH ISSFLRFFIQLFFAKPYQIHWIAELKLECPEYSGEAKGYHSNYLINE HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEECC >Mature Secondary Structure AVQWRSLSIKIILFGCFTIAQANPLFAEDFKTQHFAEEGYLQGWNFTFRNEKYNVFATF CEEEEEEEEEEEEEEEEHHHCCCCCHHHHHHHHHHHHCCCEECCCEEEECCCEEEEEEE LVSNFGPGSLNNGISLLLKAKDQPVFYSTREFDADEYEFKKGKFYQRSGENWMEYKNGIY EECCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHCCCCCCEEECCCCCHHHHCCCEE SFYMNYGDWEIKLDYKPRRGNVPISQGRFPLMEKGKFVQADIPFSYSSVTGTIRYKDVIE EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCEEEEEEHHHHHH EVKGVGGLEHILTNEAVYQFSKKWELVRSRTSDGYRIFTGGFLGNSNFPGEFYRRVAVLN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHEEEEEEEC PSGNLILEGTVERVEVLEWEKEPTSGYTIPKSEILYFQNETCKLNVKRTRPIATMSALEN CCCCEEEECCHHEEEEEECCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHH ISSFLRFFIQLFFAKPYQIHWIAELKLECPEYSGEAKGYHSNYLINE HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA