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The map label for this gene is yibD [C]

Identifier: 183222238

GI number: 183222238

Start: 2979894

End: 2980613

Strand: Direct

Name: yibD [C]

Synonym: LEPBI_I2889

Alternate gene names: 183222238

Gene position: 2979894-2980613 (Clockwise)

Preceding gene: 183222237

Following gene: 183222242

Centisome position: 82.78

GC content: 32.92

Gene sequence:

>720_bases
ATGAAAAAAAATCATCTCAGCATCATTATACCTTGTTATAACGAATGCAACCGCCTTCCCCAATATTTAGATACTTTAAT
GATTACGTTTCAAAAGAAATCCAATGTGGATTTCATCATTGTGGACGATGGAAGTCCGAAAAAAGAGTTTTTAAAATTAA
AACAGAATATCGAACATCACTTATCCAATCCAAAAATTCAACTTTTACGCTATGAATTGAATCTCGGAAAAGGTGGTGCC
ATCCAATTTGGCCTTCAAGTTGCGAAAGGAAATTATGTAGGATTTGTTGATGCCGACGGAGCAACGCCAGCCTATGAACT
CCAACGGATTTGGGATCACATTGACACACATAAAGATATTGATTTAATTGTTGGCTCTCGAATTCCAATGCTTGGTAGAA
GTGTAAAAAAATCGTTTTATCGACACATCGCCAATCGAGTATTTTCTTATTATTTTCATAAAATATTTAAAATACAAATG
TATGATCCACAGTGTGGATGTAAAATATTCAAAAAATCATTGTATGAAACTATGAAAGAAAAAATAACCGACTTACGTTG
GTTATGGGACACACAATTGATTGTATTATCCTACCGAAATCAAAAGAAGATTTTTGAATTTCCGATTGATTGGAATGAAA
TTCCTGATTCAAAATTCAACTTCCTAAAAGATTCTTGGGTAGTTCTTTATTCTGCTTGGAAATACAGAAACATCATTTGA

Upstream 100 bases:

>100_bases
CGTTAGAACAATTTGTATTCTCATTATTAGATAAATGACTTGATGGTAGAACCAATTAGAAAACAAGTATATTGGGAGAA
ATAAATTTCTCCCAATCCAT

Downstream 100 bases:

>100_bases
TGTACAAATCAGCCCCTGCTTGGAATTTTTTCTTTTCCGAGATTCCATAGATTTTTTTTGGAGAACTTATTCCTTTTAAT
TTATGTTCTCCTAACTCTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Dolichyl-Phosphate Beta-Glucosyltransferase; Dolichol-P-Glucose Synthetase; Glycosyl Transferase Family 2 Protein; Dolichol-Phosphate Mannosyltransferase; Dolichol-P-Glucose Transferase; Glycosyltransferase AglD; Family 2 Glycosyltransferase; Glycolsyltransferase; Family Glycosyltransferase; Glycosyltransferase D; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Group 2 Family Glycosyl Transferase; GtrA Family Protein; Two-Component System Response Regulator; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Group 2 Family; Glucosyl Transferase; Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glucosyltransferase

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKKNHLSIIIPCYNECNRLPQYLDTLMITFQKKSNVDFIIVDDGSPKKEFLKLKQNIEHHLSNPKIQLLRYELNLGKGGA
IQFGLQVAKGNYVGFVDADGATPAYELQRIWDHIDTHKDIDLIVGSRIPMLGRSVKKSFYRHIANRVFSYYFHKIFKIQM
YDPQCGCKIFKKSLYETMKEKITDLRWLWDTQLIVLSYRNQKKIFEFPIDWNEIPDSKFNFLKDSWVVLYSAWKYRNII

Sequences:

>Translated_239_residues
MKKNHLSIIIPCYNECNRLPQYLDTLMITFQKKSNVDFIIVDDGSPKKEFLKLKQNIEHHLSNPKIQLLRYELNLGKGGA
IQFGLQVAKGNYVGFVDADGATPAYELQRIWDHIDTHKDIDLIVGSRIPMLGRSVKKSFYRHIANRVFSYYFHKIFKIQM
YDPQCGCKIFKKSLYETMKEKITDLRWLWDTQLIVLSYRNQKKIFEFPIDWNEIPDSKFNFLKDSWVVLYSAWKYRNII
>Mature_239_residues
MKKNHLSIIIPCYNECNRLPQYLDTLMITFQKKSNVDFIIVDDGSPKKEFLKLKQNIEHHLSNPKIQLLRYELNLGKGGA
IQFGLQVAKGNYVGFVDADGATPAYELQRIWDHIDTHKDIDLIVGSRIPMLGRSVKKSFYRHIANRVFSYYFHKIFKIQM
YDPQCGCKIFKKSLYETMKEKITDLRWLWDTQLIVLSYRNQKKIFEFPIDWNEIPDSKFNFLKDSWVVLYSAWKYRNII

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7019323, Length=226, Percent_Identity=26.5486725663717, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI215276969, Length=220, Percent_Identity=23.1818181818182, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI4503363, Length=213, Percent_Identity=25.8215962441315, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25146207, Length=231, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6325029, Length=241, Percent_Identity=30.7053941908714, Blast_Score=97, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24582769, Length=228, Percent_Identity=29.8245614035088, Blast_Score=97, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 28384; Mature: 28384

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNHLSIIIPCYNECNRLPQYLDTLMITFQKKSNVDFIIVDDGSPKKEFLKLKQNIEHH
CCCCCEEEEEECHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH
LSNPKIQLLRYELNLGKGGAIQFGLQVAKGNYVGFVDADGATPAYELQRIWDHIDTHKDI
HCCCCEEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCE
DLIVGSRIPMLGRSVKKSFYRHIANRVFSYYFHKIFKIQMYDPQCGCKIFKKSLYETMKE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH
KITDLRWLWDTQLIVLSYRNQKKIFEFPIDWNEIPDSKFNFLKDSWVVLYSAWKYRNII
HHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCEEEEEEHHHHCCCC
>Mature Secondary Structure
MKKNHLSIIIPCYNECNRLPQYLDTLMITFQKKSNVDFIIVDDGSPKKEFLKLKQNIEHH
CCCCCEEEEEECHHHHHHHHHHHHHHHEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH
LSNPKIQLLRYELNLGKGGAIQFGLQVAKGNYVGFVDADGATPAYELQRIWDHIDTHKDI
HCCCCEEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCE
DLIVGSRIPMLGRSVKKSFYRHIANRVFSYYFHKIFKIQMYDPQCGCKIFKKSLYETMKE
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH
KITDLRWLWDTQLIVLSYRNQKKIFEFPIDWNEIPDSKFNFLKDSWVVLYSAWKYRNII
HHHHHHHHHCCEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA