| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222237
Identifier: 183222237
GI number: 183222237
Start: 2979347
End: 2979799
Strand: Direct
Name: 183222237
Synonym: LEPBI_I2888
Alternate gene names: NA
Gene position: 2979347-2979799 (Clockwise)
Preceding gene: 183222236
Following gene: 183222238
Centisome position: 82.77
GC content: 38.63
Gene sequence:
>453_bases ATGGAAACCAAGATCGGAGAATGGATTGAAATTTCATTTGAACCACCATTCATCCCACCGAGTACATTATGGAAACAAGC AGAAACCTTAACCCTAACTTCTGAACTAGAATCCTCTGCCATCAGCTTTCTGAAAGATTTTACCAAAATTCTCAATACGA AGGATGCAAAAAAAATCCTGTTGGCAACTTATTACCGTGCCAAAGACACTTCCGAAGTTCGATATTATCCATACAATGAA ACAGATGAACTAAAATCGATCCAAGGGATGACAAAAACAATTGGATCAACCTGGAAATTCAATGCGCAAAAAAATAAATT TCGATTGGTTTGTAACCAACAGATTCTTGAGATCACGGATCATAAAGGGGAGCCAGTGATCACTTCGAAAAAAGGAGCTT CCATTCCGATTTATTTGAGTCGGATCGATGGGAAATGGGTCATTGTGCGTTAG
Upstream 100 bases:
>100_bases CAATTTTCCTCCAGAAGCGGAAGTCAAACTGATGTTAGGTCAGAAAGGTCAATTTCCAGATGAGGGAATTTTACTCCAAC AGTAACAATGGAACCAAACG
Downstream 100 bases:
>100_bases AACAATTTGTATTCTCATTATTAGATAAATGACTTGATGGTAGAACCAATTAGAAAACAAGTATATTGGGAGAAATAAAT TTCTCCCAATCCATATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues METKIGEWIEISFEPPFIPPSTLWKQAETLTLTSELESSAISFLKDFTKILNTKDAKKILLATYYRAKDTSEVRYYPYNE TDELKSIQGMTKTIGSTWKFNAQKNKFRLVCNQQILEITDHKGEPVITSKKGASIPIYLSRIDGKWVIVR
Sequences:
>Translated_150_residues METKIGEWIEISFEPPFIPPSTLWKQAETLTLTSELESSAISFLKDFTKILNTKDAKKILLATYYRAKDTSEVRYYPYNE TDELKSIQGMTKTIGSTWKFNAQKNKFRLVCNQQILEITDHKGEPVITSKKGASIPIYLSRIDGKWVIVR >Mature_150_residues METKIGEWIEISFEPPFIPPSTLWKQAETLTLTSELESSAISFLKDFTKILNTKDAKKILLATYYRAKDTSEVRYYPYNE TDELKSIQGMTKTIGSTWKFNAQKNKFRLVCNQQILEITDHKGEPVITSKKGASIPIYLSRIDGKWVIVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17284; Mature: 17284
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKIGEWIEISFEPPFIPPSTLWKQAETLTLTSELESSAISFLKDFTKILNTKDAKKIL CCCCCCCEEEEEECCCCCCHHHHHHCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHEE LATYYRAKDTSEVRYYPYNETDELKSIQGMTKTIGSTWKFNAQKNKFRLVCNQQILEITD HHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEC HKGEPVITSKKGASIPIYLSRIDGKWVIVR CCCCCEEECCCCCCCEEEEEEECCEEEEEC >Mature Secondary Structure METKIGEWIEISFEPPFIPPSTLWKQAETLTLTSELESSAISFLKDFTKILNTKDAKKIL CCCCCCCEEEEEECCCCCCHHHHHHCHHEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHEE LATYYRAKDTSEVRYYPYNETDELKSIQGMTKTIGSTWKFNAQKNKFRLVCNQQILEITD HHHEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCEEEEEEC HKGEPVITSKKGASIPIYLSRIDGKWVIVR CCCCCEEECCCCCCCEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA