| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222194
Identifier: 183222194
GI number: 183222194
Start: 2934362
End: 2936545
Strand: Direct
Name: 183222194
Synonym: LEPBI_I2844
Alternate gene names: NA
Gene position: 2934362-2936545 (Clockwise)
Preceding gene: 183222180
Following gene: 183222195
Centisome position: 81.52
GC content: 33.61
Gene sequence:
>2184_bases ATGGACTCTCAATGGAAACGATTCTGGGAAACCGGCCTCTTCCCTTCTCTCGAATTTAGCCTTAGCCTTTCGATTGGTTA TGTGCTATCGTTGTTTTTTTACGTAGCTGGATCAGAATTATCTTTAATCGATAGGACGGACACTGCCTACCCCATTTTAC AGGCGCTAATCGGTATTTTTTTTGCGGCAGGGTTTATTTATAGGAAGTATAAACAGAACTTTCCGATTAGCTTTAGTTTG GCGCTATTAACACTTGCTATCGGACAAGTTGTTTGGTTATTATTAGGGAATACTTCGGAATTTTTAATCGATTATATTTT TTCTTTTGAATTAGTATTAATGAGTGGAGTATTGTCTGCCTTTGCAATCGGAATTTATGGAGGGTCGCTAAAAGACTTTA GGTTTTTAAGTTTTACTTTGGGGATTACGGTATTTACCTTTTATTCCCTATTTGAACCAAATCAAAACTATTCGATCAAA GTGCTTCTTGCAATTCTTTACATCCTTTTATCTTTTTATTTTTTTAGCACATTATTCCAACAAAATCCAATCTCAAGCAA ATTTTACAAAATCAGATCCAAGATCGGCAAACACCCGCTATTTTCCCCATTCTATCGATCTAGTTTATCATTACTCATTG CTTACTGTATTTTACATTTATATTTTCAACCTGGCCCCAAAATTCCACTTATACTTTCTATCTCGTTTTCAGTTACATTC GGTAGAGTGATGTCTTTACTCGGAGGCTTAAAAAAAGAAACAAAAGCCGTCTTTTTAATTGGTAGAGTTGCATTACTTTT TGCATTCTTCTTTTTTATTTACCAAACATATTGGAGTTCGTTTTTTATTGCATTGTGCATCATCAATGGTACGATCGTTG GATTTTTTAAGCCAAACAAAACTCCTTACAAAGAATATCTTCTGATCGGTTTGGAAACAACCTTATACCTAGGACTTTCT TTCTTATTATACTTTTGGAATTTGCCAATGGGACTTAGAACATTGACAGCTTTGTTGTTTGTTCCAATCTTAATATATCC ATATTTATTGCAGAAACACATCATTCGATTGCCTCGTTTTATCATGTTAGCTGCCGCGTGTTTAATTGTTCTATTTTTCT TCTCTCCTCCGACAATTAGAACAAATTCACCTTTTTCCAAAAAAGAAAATTTTGATCCAATTCCATTTGCCATTACTAAC TTAAATTTTAATGAAGAGGAATATATTTTTTATAAATCGGTTTTGCCGTTTCCTTCGAACCCATTTCTTCCCAAAAGATC AGAAATTAAAAACAAAATAGTTGTTCTTGGTTTGAGTTCAAATCAATCTCAAATCATTTCTTATATAGAACGATTGAGTG AGGAAGAACACCCGTTTTTGATCATCACTACACGAAACAAAACCAATCAATTTCATCATATCAATGCACTTTCTCTATTG AGTAGGAAATCATATTGGAATTTTGATATATATTATCCTAATTACTTGGCTCAAAAAATAAACTTCACACCAAGCCTTCC CAATGATTGGAAACTCAAATATTTCACTGAAAAATTAGACAACCTATCGTTCTTAGAAGTAGTGAGTGTTTTGGATTCTG TTTTGAAGTATTCTTCTGGTGATTTAAGAAAGGATGCAATTGAAATCAAACATCTTTATTATGAATCATTTGCCGCCTAT GCAAAGTTTTATCACAATATAGGTCAAAATAAATTGAGTTTGGATGCAATCGCGTATGCCAGAAAATTTGAATCCCCAAA ACCAGATTTACTAAGAATTGCCTTTAATAGTTTGAAATTTACAACCCCGGAAGCGGAGTATATACCAATACTAGAAGATT TGAGCCTAGATATTGAGTTCCAAGAATTTGCTTGGAACTCGCTGATTCCAATGTTCGAGTCTATGGGTGATTGGAATAAT GCTTTAAAAACTATGGGTCTTTTAGAACGTTTTTACCGTTCAAATAACCAAACAGAACTTGCAAACGAATTGGAACTAGC GAGAGTTCGTTTATATATGAACCAAGAAAATTGGAAAGAAGTGGAACCTATCATTGCAACAAGATTAAAAGAATACCCAA ATTCAGTGATTTGGGAACGTTTAAAAAATGAAATATTAGAAAAAAAAGACTCACTACGACGAATCAGTGTTCGTCCTGAT GCAAAAGAGGCAAGAATCCAATGA
Upstream 100 bases:
>100_bases AAAGGGCTGTTTTGGTCAAACATTTTGTGCACCGCCAAATAAAATTAGAATTTCTTTCGTTTGCGAACAGGACCCATTCC CCAACATTGGTAGCTATTCT
Downstream 100 bases:
>100_bases TCCATTCAACACTACTCGGAATACTTGTAGCTATTTTATCTGTTTTCGTTGCTATTTTAATTGAAGGTGCTTCTCTTAGG TCCTTCTTCCACATACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MDSQWKRFWETGLFPSLEFSLSLSIGYVLSLFFYVAGSELSLIDRTDTAYPILQALIGIFFAAGFIYRKYKQNFPISFSL ALLTLAIGQVVWLLLGNTSEFLIDYIFSFELVLMSGVLSAFAIGIYGGSLKDFRFLSFTLGITVFTFYSLFEPNQNYSIK VLLAILYILLSFYFFSTLFQQNPISSKFYKIRSKIGKHPLFSPFYRSSLSLLIAYCILHLYFQPGPKIPLILSISFSVTF GRVMSLLGGLKKETKAVFLIGRVALLFAFFFFIYQTYWSSFFIALCIINGTIVGFFKPNKTPYKEYLLIGLETTLYLGLS FLLYFWNLPMGLRTLTALLFVPILIYPYLLQKHIIRLPRFIMLAAACLIVLFFFSPPTIRTNSPFSKKENFDPIPFAITN LNFNEEEYIFYKSVLPFPSNPFLPKRSEIKNKIVVLGLSSNQSQIISYIERLSEEEHPFLIITTRNKTNQFHHINALSLL SRKSYWNFDIYYPNYLAQKINFTPSLPNDWKLKYFTEKLDNLSFLEVVSVLDSVLKYSSGDLRKDAIEIKHLYYESFAAY AKFYHNIGQNKLSLDAIAYARKFESPKPDLLRIAFNSLKFTTPEAEYIPILEDLSLDIEFQEFAWNSLIPMFESMGDWNN ALKTMGLLERFYRSNNQTELANELELARVRLYMNQENWKEVEPIIATRLKEYPNSVIWERLKNEILEKKDSLRRISVRPD AKEARIQ
Sequences:
>Translated_727_residues MDSQWKRFWETGLFPSLEFSLSLSIGYVLSLFFYVAGSELSLIDRTDTAYPILQALIGIFFAAGFIYRKYKQNFPISFSL ALLTLAIGQVVWLLLGNTSEFLIDYIFSFELVLMSGVLSAFAIGIYGGSLKDFRFLSFTLGITVFTFYSLFEPNQNYSIK VLLAILYILLSFYFFSTLFQQNPISSKFYKIRSKIGKHPLFSPFYRSSLSLLIAYCILHLYFQPGPKIPLILSISFSVTF GRVMSLLGGLKKETKAVFLIGRVALLFAFFFFIYQTYWSSFFIALCIINGTIVGFFKPNKTPYKEYLLIGLETTLYLGLS FLLYFWNLPMGLRTLTALLFVPILIYPYLLQKHIIRLPRFIMLAAACLIVLFFFSPPTIRTNSPFSKKENFDPIPFAITN LNFNEEEYIFYKSVLPFPSNPFLPKRSEIKNKIVVLGLSSNQSQIISYIERLSEEEHPFLIITTRNKTNQFHHINALSLL SRKSYWNFDIYYPNYLAQKINFTPSLPNDWKLKYFTEKLDNLSFLEVVSVLDSVLKYSSGDLRKDAIEIKHLYYESFAAY AKFYHNIGQNKLSLDAIAYARKFESPKPDLLRIAFNSLKFTTPEAEYIPILEDLSLDIEFQEFAWNSLIPMFESMGDWNN ALKTMGLLERFYRSNNQTELANELELARVRLYMNQENWKEVEPIIATRLKEYPNSVIWERLKNEILEKKDSLRRISVRPD AKEARIQ >Mature_727_residues MDSQWKRFWETGLFPSLEFSLSLSIGYVLSLFFYVAGSELSLIDRTDTAYPILQALIGIFFAAGFIYRKYKQNFPISFSL ALLTLAIGQVVWLLLGNTSEFLIDYIFSFELVLMSGVLSAFAIGIYGGSLKDFRFLSFTLGITVFTFYSLFEPNQNYSIK VLLAILYILLSFYFFSTLFQQNPISSKFYKIRSKIGKHPLFSPFYRSSLSLLIAYCILHLYFQPGPKIPLILSISFSVTF GRVMSLLGGLKKETKAVFLIGRVALLFAFFFFIYQTYWSSFFIALCIINGTIVGFFKPNKTPYKEYLLIGLETTLYLGLS FLLYFWNLPMGLRTLTALLFVPILIYPYLLQKHIIRLPRFIMLAAACLIVLFFFSPPTIRTNSPFSKKENFDPIPFAITN LNFNEEEYIFYKSVLPFPSNPFLPKRSEIKNKIVVLGLSSNQSQIISYIERLSEEEHPFLIITTRNKTNQFHHINALSLL SRKSYWNFDIYYPNYLAQKINFTPSLPNDWKLKYFTEKLDNLSFLEVVSVLDSVLKYSSGDLRKDAIEIKHLYYESFAAY AKFYHNIGQNKLSLDAIAYARKFESPKPDLLRIAFNSLKFTTPEAEYIPILEDLSLDIEFQEFAWNSLIPMFESMGDWNN ALKTMGLLERFYRSNNQTELANELELARVRLYMNQENWKEVEPIIATRLKEYPNSVIWERLKNEILEKKDSLRRISVRPD AKEARIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84533; Mature: 84533
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSQWKRFWETGLFPSLEFSLSLSIGYVLSLFFYVAGSELSLIDRTDTAYPILQALIGIF CCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH FAAGFIYRKYKQNFPISFSLALLTLAIGQVVWLLLGNTSEFLIDYIFSFELVLMSGVLSA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH FAIGIYGGSLKDFRFLSFTLGITVFTFYSLFEPNQNYSIKVLLAILYILLSFYFFSTLFQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNPISSKFYKIRSKIGKHPLFSPFYRSSLSLLIAYCILHLYFQPGPKIPLILSISFSVTF CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHH GRVMSLLGGLKKETKAVFLIGRVALLFAFFFFIYQTYWSSFFIALCIINGTIVGFFKPNK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC TPYKEYLLIGLETTLYLGLSFLLYFWNLPMGLRTLTALLFVPILIYPYLLQKHIIRLPRF CCHHHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLAAACLIVLFFFSPPTIRTNSPFSKKENFDPIPFAITNLNFNEEEYIFYKSVLPFPSN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCC PFLPKRSEIKNKIVVLGLSSNQSQIISYIERLSEEEHPFLIITTRNKTNQFHHINALSLL CCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH SRKSYWNFDIYYPNYLAQKINFTPSLPNDWKLKYFTEKLDNLSFLEVVSVLDSVLKYSSG HHCCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC DLRKDAIEIKHLYYESFAAYAKFYHNIGQNKLSLDAIAYARKFESPKPDLLRIAFNSLKF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCEE TTPEAEYIPILEDLSLDIEFQEFAWNSLIPMFESMGDWNNALKTMGLLERFYRSNNQTEL CCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH ANELELARVRLYMNQENWKEVEPIIATRLKEYPNSVIWERLKNEILEKKDSLRRISVRPD HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCC AKEARIQ CHHCCCC >Mature Secondary Structure MDSQWKRFWETGLFPSLEFSLSLSIGYVLSLFFYVAGSELSLIDRTDTAYPILQALIGIF CCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH FAAGFIYRKYKQNFPISFSLALLTLAIGQVVWLLLGNTSEFLIDYIFSFELVLMSGVLSA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH FAIGIYGGSLKDFRFLSFTLGITVFTFYSLFEPNQNYSIKVLLAILYILLSFYFFSTLFQ HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QNPISSKFYKIRSKIGKHPLFSPFYRSSLSLLIAYCILHLYFQPGPKIPLILSISFSVTF CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHH GRVMSLLGGLKKETKAVFLIGRVALLFAFFFFIYQTYWSSFFIALCIINGTIVGFFKPNK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC TPYKEYLLIGLETTLYLGLSFLLYFWNLPMGLRTLTALLFVPILIYPYLLQKHIIRLPRF CCHHHHEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IMLAAACLIVLFFFSPPTIRTNSPFSKKENFDPIPFAITNLNFNEEEYIFYKSVLPFPSN HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCC PFLPKRSEIKNKIVVLGLSSNQSQIISYIERLSEEEHPFLIITTRNKTNQFHHINALSLL CCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHH SRKSYWNFDIYYPNYLAQKINFTPSLPNDWKLKYFTEKLDNLSFLEVVSVLDSVLKYSSG HHCCCCEEEEECCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC DLRKDAIEIKHLYYESFAAYAKFYHNIGQNKLSLDAIAYARKFESPKPDLLRIAFNSLKF CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCEE TTPEAEYIPILEDLSLDIEFQEFAWNSLIPMFESMGDWNNALKTMGLLERFYRSNNQTEL CCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHH ANELELARVRLYMNQENWKEVEPIIATRLKEYPNSVIWERLKNEILEKKDSLRRISVRPD HHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCC AKEARIQ CHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA