| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222174
Identifier: 183222174
GI number: 183222174
Start: 2912237
End: 2912983
Strand: Direct
Name: 183222174
Synonym: LEPBI_I2819
Alternate gene names: NA
Gene position: 2912237-2912983 (Clockwise)
Preceding gene: 183222173
Following gene: 183222177
Centisome position: 80.9
GC content: 37.88
Gene sequence:
>747_bases TTGTATTCTACCAAAACTAAATTAGGAAATAAATTGATGAATGCCCAAACTTTTAAACCCAAAAAACTCCAAAAACCAAA ACAAATCCTCTGTGTGATCACATTTTTATTAGCGACGACATACAACTGCGCTACCAGTTTGTTACCAGTAAAAACATCAA TTGAAAAGAAGGAAACCATTGCCGTCTTTGTGAACCTTGTCGAAGCGAAGCCCGCCTTAACCTATAAAGCAACAAGGAGC ATCGCTTCCAAAAACATAGCGGAGTTCGACGAATTTTTTCCAATGTTCAAACAATTGGCTCAAAAGGAACTACCCGCAGT TAAATTTCTCGAACCTAAAACCACTCCCCAAGAAATCTTGGGTCAAACCGTTTACACATATGACTTCGGAAAAACGGGAG CAAAGATTGGAATTGAATTCATCCCTGCCACAACATACATGCTGAGTAATGAATCGGAATACACGTCAGAAAAACTTAAA AAACAATCTTTTGAACAGACAACAAAAATTGTGATTCGTTTCCGAGAGATCAATGGAGATCGACTTGGAAAATATATCGG GAGTCGATTAGGATATGAATTAGCATCAGCAACCATCAATGGTTCTTGTGACGAAGAATGTCCCAAAAATATCAATGCCA TGATGGCCTTATCAAATCCAGGGAAACTAGCTCCCGCACTCAAAGCACAAATGCCTGAAAACTTAAAAAAAGTCATCCAA GAAATTCTAGCAAGTAAAGAAGATTAA
Upstream 100 bases:
>100_bases TGTAGAACTCTTTCGACGGTATAGAATTAAAATTTTGTAGCAATTCAAAAAATACGTATCAATTCATGATTCCAGACGAT TTCACTTCCTAAATTGGGTA
Downstream 100 bases:
>100_bases TCTCGAAGATTCAAAGTTGTAGGTGAATTGAATTTATAATAACCTACAATGTCATATTATATTTTTTCATTCCTTCCCAT TTTGGCTCTGTTAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MYSTKTKLGNKLMNAQTFKPKKLQKPKQILCVITFLLATTYNCATSLLPVKTSIEKKETIAVFVNLVEAKPALTYKATRS IASKNIAEFDEFFPMFKQLAQKELPAVKFLEPKTTPQEILGQTVYTYDFGKTGAKIGIEFIPATTYMLSNESEYTSEKLK KQSFEQTTKIVIRFREINGDRLGKYIGSRLGYELASATINGSCDEECPKNINAMMALSNPGKLAPALKAQMPENLKKVIQ EILASKED
Sequences:
>Translated_248_residues MYSTKTKLGNKLMNAQTFKPKKLQKPKQILCVITFLLATTYNCATSLLPVKTSIEKKETIAVFVNLVEAKPALTYKATRS IASKNIAEFDEFFPMFKQLAQKELPAVKFLEPKTTPQEILGQTVYTYDFGKTGAKIGIEFIPATTYMLSNESEYTSEKLK KQSFEQTTKIVIRFREINGDRLGKYIGSRLGYELASATINGSCDEECPKNINAMMALSNPGKLAPALKAQMPENLKKVIQ EILASKED >Mature_248_residues MYSTKTKLGNKLMNAQTFKPKKLQKPKQILCVITFLLATTYNCATSLLPVKTSIEKKETIAVFVNLVEAKPALTYKATRS IASKNIAEFDEFFPMFKQLAQKELPAVKFLEPKTTPQEILGQTVYTYDFGKTGAKIGIEFIPATTYMLSNESEYTSEKLK KQSFEQTTKIVIRFREINGDRLGKYIGSRLGYELASATINGSCDEECPKNINAMMALSNPGKLAPALKAQMPENLKKVIQ EILASKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27746; Mature: 27746
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTKTKLGNKLMNAQTFKPKKLQKPKQILCVITFLLATTYNCATSLLPVKTSIEKKETI CCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AVFVNLVEAKPALTYKATRSIASKNIAEFDEFFPMFKQLAQKELPAVKFLEPKTTPQEIL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHH GQTVYTYDFGKTGAKIGIEFIPATTYMLSNESEYTSEKLKKQSFEQTTKIVIRFREINGD CCEEEEEECCCCCCHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RLGKYIGSRLGYELASATINGSCDEECPKNINAMMALSNPGKLAPALKAQMPENLKKVIQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHH EILASKED HHHCCCCC >Mature Secondary Structure MYSTKTKLGNKLMNAQTFKPKKLQKPKQILCVITFLLATTYNCATSLLPVKTSIEKKETI CCCCHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AVFVNLVEAKPALTYKATRSIASKNIAEFDEFFPMFKQLAQKELPAVKFLEPKTTPQEIL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHH GQTVYTYDFGKTGAKIGIEFIPATTYMLSNESEYTSEKLKKQSFEQTTKIVIRFREINGD CCEEEEEECCCCCCHHEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH RLGKYIGSRLGYELASATINGSCDEECPKNINAMMALSNPGKLAPALKAQMPENLKKVIQ HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHH EILASKED HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA