| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222170
Identifier: 183222170
GI number: 183222170
Start: 2909197
End: 2910129
Strand: Direct
Name: 183222170
Synonym: LEPBI_I2815
Alternate gene names: NA
Gene position: 2909197-2910129 (Clockwise)
Preceding gene: 183222169
Following gene: 183222171
Centisome position: 80.82
GC content: 36.66
Gene sequence:
>933_bases ATGAAAGTTCCAACGATGAAACCATTCCTAATATTTAAAAAAATCCAGTTGCCTGTATTTTTGATTCTCCTCTGCATTCA CCCAAAGCTACTCTTTAGCCAAAGCAAAGACATGGTCAAACTAGAATGGTATCATTATATCTTACTTTCACCTGTTCTCA TCATCGATGGCATAAAAAGAGGTTATGCCGAAACAAAAAAAAACATCCAAGAATACCAAACCCACCAGTCCTTACCTGAA TTACACAAAGCAGTCATCCAGTCCGATTACGAAAAAACCAAATCCCTCGTGGAAAGTGGAGTTCATTTGGAAACGATAGA CACCAAAGGAGCAACAGCATTATTTTATGCGATCGAATTGAATCGAATCAACATAGCTCGTTTCCTGATCACAAAGAATG CCAATGTGAATGTTTCGAATTTTCAAGGAAGGCCCGCGGCGCTTTCCGCAATCAAAAACAATCAATTTGATCTCATCAAA ATGATGTTAGACCATGGATTGAACCTACAGAATCCAAAAACAGGTGATACCTTACTAACCATCGCTTGTGCTTTTAAACC AACTAATTTTAAACTCGTCCAACTTTTGATTGAGCGTGGTGTTGCTATCAATGCAAAAGACAAAAACCATTATTCTGCTT TGATGCATTTGACCACAAGAGAAGAACCGAATTTAGACATCATTCGATACACAATCAAAAAAGGTGCGGATGTAAATGCA AAAGATCAATTGGGAAGATCCATCCTTCGTTTACTTGTGGAAGCGAGAACTCAGAACTTAATATTAGTTCAAATTCTATT GGAAAATGGTGCTGATCTTTATGTTAAAGATAATGAAGGAAAAACTATTTTTGATTTTATCAATGCCTATTATGATTCCC CTGAAACAGATGATCTTGTTCTCCTTCTCAAACGATACAAAAAGAAACGGTAG
Upstream 100 bases:
>100_bases ATCTTTTTGATTGGGACTTTCTTAGATAAAATCATCAAAAACATCAAAGAAAAGGTTTCTGCTTTTTTCAATTCATTCTT GTTATAAGAGTATACTCGAT
Downstream 100 bases:
>100_bases AGATTAAAGGAGAACGCCTCATACCTCAGTTCACCCAATCGGTAATAAATCTTCACGATTTTTAAAAATAATTCTCGCTT AATTGAGTTCTTCTGCTCTC
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MKVPTMKPFLIFKKIQLPVFLILLCIHPKLLFSQSKDMVKLEWYHYILLSPVLIIDGIKRGYAETKKNIQEYQTHQSLPE LHKAVIQSDYEKTKSLVESGVHLETIDTKGATALFYAIELNRINIARFLITKNANVNVSNFQGRPAALSAIKNNQFDLIK MMLDHGLNLQNPKTGDTLLTIACAFKPTNFKLVQLLIERGVAINAKDKNHYSALMHLTTREEPNLDIIRYTIKKGADVNA KDQLGRSILRLLVEARTQNLILVQILLENGADLYVKDNEGKTIFDFINAYYDSPETDDLVLLLKRYKKKR
Sequences:
>Translated_310_residues MKVPTMKPFLIFKKIQLPVFLILLCIHPKLLFSQSKDMVKLEWYHYILLSPVLIIDGIKRGYAETKKNIQEYQTHQSLPE LHKAVIQSDYEKTKSLVESGVHLETIDTKGATALFYAIELNRINIARFLITKNANVNVSNFQGRPAALSAIKNNQFDLIK MMLDHGLNLQNPKTGDTLLTIACAFKPTNFKLVQLLIERGVAINAKDKNHYSALMHLTTREEPNLDIIRYTIKKGADVNA KDQLGRSILRLLVEARTQNLILVQILLENGADLYVKDNEGKTIFDFINAYYDSPETDDLVLLLKRYKKKR >Mature_310_residues MKVPTMKPFLIFKKIQLPVFLILLCIHPKLLFSQSKDMVKLEWYHYILLSPVLIIDGIKRGYAETKKNIQEYQTHQSLPE LHKAVIQSDYEKTKSLVESGVHLETIDTKGATALFYAIELNRINIARFLITKNANVNVSNFQGRPAALSAIKNNQFDLIK MMLDHGLNLQNPKTGDTLLTIACAFKPTNFKLVQLLIERGVAINAKDKNHYSALMHLTTREEPNLDIIRYTIKKGADVNA KDQLGRSILRLLVEARTQNLILVQILLENGADLYVKDNEGKTIFDFINAYYDSPETDDLVLLLKRYKKKR
Specific function: Unknown
COG id: COG0666
COG function: function code R; FOG: Ankyrin repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 18 ANK repeats [H]
Homologues:
Organism=Homo sapiens, GI22208957, Length=206, Percent_Identity=25.7281553398058, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI18079216, Length=254, Percent_Identity=24.8031496062992, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI148596917, Length=236, Percent_Identity=25.4237288135593, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI217416347, Length=251, Percent_Identity=25.0996015936255, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI62988328, Length=203, Percent_Identity=29.064039408867, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI268607595, Length=203, Percent_Identity=29.064039408867, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI70780355, Length=245, Percent_Identity=25.3061224489796, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI70780359, Length=245, Percent_Identity=25.3061224489796, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI70780357, Length=245, Percent_Identity=25.3061224489796, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI70780353, Length=245, Percent_Identity=25.3061224489796, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI215598574, Length=245, Percent_Identity=25.3061224489796, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI24233530, Length=204, Percent_Identity=25.9803921568627, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI224809478, Length=135, Percent_Identity=30.3703703703704, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI224809476, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224809472, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224809470, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224809468, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224809474, Length=135, Percent_Identity=30.3703703703704, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI256222430, Length=237, Percent_Identity=25.7383966244726, Blast_Score=66, Evalue=5e-11, Organism=Homo sapiens, GI217416350, Length=200, Percent_Identity=25.5, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI281359521, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI281359519, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI28558752, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI28558750, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI28558756, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI28558754, Length=223, Percent_Identity=28.2511210762332, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI221330474, Length=219, Percent_Identity=26.4840182648402, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221330482, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI221330478, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI221330480, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI281363919, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI221330476, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI45551135, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI28573593, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI45550479, Length=199, Percent_Identity=26.6331658291457, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI161082110, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI161082106, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082096, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082081, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356741, Length=247, Percent_Identity=27.5303643724696, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI161082089, Length=206, Percent_Identity=29.126213592233, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI161082099, Length=196, Percent_Identity=29.5918367346939, Blast_Score=65, Evalue=8e-11, Organism=Drosophila melanogaster, GI161082092, Length=206, Percent_Identity=29.126213592233, Blast_Score=64, Evalue=9e-11, Organism=Drosophila melanogaster, GI161082085, Length=196, Percent_Identity=29.5918367346939, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002110 - InterPro: IPR020683 - InterPro: IPR007685 [H]
Pfam domain/function: PF00023 Ank; PF04607 RelA_SpoT [H]
EC number: NA
Molecular weight: Translated: 35481; Mature: 35481
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPTMKPFLIFKKIQLPVFLILLCIHPKLLFSQSKDMVKLEWYHYILLSPVLIIDGIKR CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH GYAETKKNIQEYQTHQSLPELHKAVIQSDYEKTKSLVESGVHLETIDTKGATALFYAIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEE NRINIARFLITKNANVNVSNFQGRPAALSAIKNNQFDLIKMMLDHGLNLQNPKTGDTLLT CCEEEEEEEEECCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEE IACAFKPTNFKLVQLLIERGVAINAKDKNHYSALMHLTTREEPNLDIIRYTIKKGADVNA EEEEECCCCHHHHHHHHHCCCEEECCCCCHHHHHEEEECCCCCCCEEEEEEECCCCCCCH KDQLGRSILRLLVEARTQNLILVQILLENGADLYVKDNEGKTIFDFINAYYDSPETDDLV HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHH LLLKRYKKKR HHHHHHHHCC >Mature Secondary Structure MKVPTMKPFLIFKKIQLPVFLILLCIHPKLLFSQSKDMVKLEWYHYILLSPVLIIDGIKR CCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHH GYAETKKNIQEYQTHQSLPELHKAVIQSDYEKTKSLVESGVHLETIDTKGATALFYAIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEE NRINIARFLITKNANVNVSNFQGRPAALSAIKNNQFDLIKMMLDHGLNLQNPKTGDTLLT CCEEEEEEEEECCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEE IACAFKPTNFKLVQLLIERGVAINAKDKNHYSALMHLTTREEPNLDIIRYTIKKGADVNA EEEEECCCCHHHHHHHHHCCCEEECCCCCHHHHHEEEECCCCCCCEEEEEEECCCCCCCH KDQLGRSILRLLVEARTQNLILVQILLENGADLYVKDNEGKTIFDFINAYYDSPETDDLV HHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHH LLLKRYKKKR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA