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The map label for this gene is araC [C]

Identifier: 183222156

GI number: 183222156

Start: 2897165

End: 2898253

Strand: Direct

Name: araC [C]

Synonym: LEPBI_I2799

Alternate gene names: 183222156

Gene position: 2897165-2898253 (Clockwise)

Preceding gene: 183222153

Following gene: 183222157

Centisome position: 80.48

GC content: 32.51

Gene sequence:

>1089_bases
ATGTTAGGTTCGATTTTAATCAGCGCAGGATTGATCCAGTCAATTTTTCTCGGCTTCTATTTTGGACTTCAAGAGAAAAG
TAAAAATATATCTAGTCGATACCTTGGGTTCTTCTTTCTTTTCCTAGCAATGTTCATGGCTTGCAACCTAGTCTATTTCA
CAGGAAACATAATCGAATACCCTCACCTCATGAAAGTAGGCTATTTATTTGGATTCTGTATTGCTCCTAGCTTTTCGGTC
TCTGTCGTTCGTTATTTTGGTATTCCCAAAGAAAAAGCCATCTGGAATCCAATTTATTTAATCGTTCCGATCCTATTTCT
ATTGTATGAAACACCATTTTATCTTTCAAACGCGGAAGATAAAATTAAGATATTATCCGATATCGCAACAAACGATTTTT
TTAGCGAATTGAACATCATCCAAATGATGATTCTCGGTTATTCCTTCTTTATTTTTTTAAGATTGTATTTCCGATTTCAA
ATCGAAATGAAACATTTCGCTAAAGACATTCACTGGGAAGGAAAAATATTTTATCAATACCTCCTCTACCTTATCATTTG
GCTCTTGTTTTGTATTTTGGTATGTGTTATTCTACCGGGGAAAATATCTGAAACGATTTCCAATCTAGGAATTTCCATTT
GGATTCTTGGGTTTGCTTGGCATCGAATATATTTAGATAAAAATATAATGAACCATCTTCAGATTCAAAAACAGGATCCA
TCAAAATATCAAAAATCATACATCCCAGAAAAACAAATGTTGGAACTAGGTAAACATTTGGAAACAATAGTCAACAACAA
AGATTACTTATTCAATGGGGACTTAAATCTTGCAAACATTGCAAATACACTTGGTCTATCCAATCATTCAACTTCTCAAG
TATGCAATCGATTTTTTGGCAAAAGTTTGATTGATGTCATCCAAGAGAAAAGAATTGAACATGCTAAAATCGCATTACTC
GATACAAAAAAAACAGTTTTGAGAATTGGATTTGATGTTGGATTTAATTCAAAAAATTCATTTATCAGAGCTTTTAAGGA
AGTTACAAAATTAACTCCGACTGAGTACAGAAATCAAAACAAATCTTAG

Upstream 100 bases:

>100_bases
TTGTCGTCCCACCCCATCGGATGGGACCTTTCTTTTTTAAAAATTCTTTCTATTCAAAGAATTAAAGAAAAGAGAAGATG
AAAGAAGATAGGGATTTTGA

Downstream 100 bases:

>100_bases
CCAAAAGAATTCTCTATCGATGGGAATCTGGGCCAATGAAGGAATTAGTTTTAGCATTAGAAAAGTTTGCCATATTTAGT
TCGGCATTGGATGACCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC/XylS Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Regulatory Helix-Turn-Helix Protein AraC Family; Helix-Turn-Helix- Domain Containing Protein AraC Type

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNLVYFTGNIIEYPHLMKVGYLFGFCIAPSFSV
SVVRYFGIPKEKAIWNPIYLIVPILFLLYETPFYLSNAEDKIKILSDIATNDFFSELNIIQMMILGYSFFIFLRLYFRFQ
IEMKHFAKDIHWEGKIFYQYLLYLIIWLLFCILVCVILPGKISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDP
SKYQKSYIPEKQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFGKSLIDVIQEKRIEHAKIALL
DTKKTVLRIGFDVGFNSKNSFIRAFKEVTKLTPTEYRNQNKS

Sequences:

>Translated_362_residues
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNLVYFTGNIIEYPHLMKVGYLFGFCIAPSFSV
SVVRYFGIPKEKAIWNPIYLIVPILFLLYETPFYLSNAEDKIKILSDIATNDFFSELNIIQMMILGYSFFIFLRLYFRFQ
IEMKHFAKDIHWEGKIFYQYLLYLIIWLLFCILVCVILPGKISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDP
SKYQKSYIPEKQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFGKSLIDVIQEKRIEHAKIALL
DTKKTVLRIGFDVGFNSKNSFIRAFKEVTKLTPTEYRNQNKS
>Mature_362_residues
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNLVYFTGNIIEYPHLMKVGYLFGFCIAPSFSV
SVVRYFGIPKEKAIWNPIYLIVPILFLLYETPFYLSNAEDKIKILSDIATNDFFSELNIIQMMILGYSFFIFLRLYFRFQ
IEMKHFAKDIHWEGKIFYQYLLYLIIWLLFCILVCVILPGKISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDP
SKYQKSYIPEKQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFGKSLIDVIQEKRIEHAKIALL
DTKKTVLRIGFDVGFNSKNSFIRAFKEVTKLTPTEYRNQNKS

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42187; Mature: 42187

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNLVYFTGNIIEY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHCC
PHLMKVGYLFGFCIAPSFSVSVVRYFGIPKEKAIWNPIYLIVPILFLLYETPFYLSNAED
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
KIKILSDIATNDFFSELNIIQMMILGYSFFIFLRLYFRFQIEMKHFAKDIHWEGKIFYQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLYLIIWLLFCILVCVILPGKISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SKYQKSYIPEKQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFG
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH
KSLIDVIQEKRIEHAKIALLDTKKTVLRIGFDVGFNSKNSFIRAFKEVTKLTPTEYRNQN
HHHHHHHHHHHHHHHHEEEEECHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCC
KS
CC
>Mature Secondary Structure
MLGSILISAGLIQSIFLGFYFGLQEKSKNISSRYLGFFFLFLAMFMACNLVYFTGNIIEY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHCC
PHLMKVGYLFGFCIAPSFSVSVVRYFGIPKEKAIWNPIYLIVPILFLLYETPFYLSNAED
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHCCCCCCCCCCH
KIKILSDIATNDFFSELNIIQMMILGYSFFIFLRLYFRFQIEMKHFAKDIHWEGKIFYQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLYLIIWLLFCILVCVILPGKISETISNLGISIWILGFAWHRIYLDKNIMNHLQIQKQDP
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
SKYQKSYIPEKQMLELGKHLETIVNNKDYLFNGDLNLANIANTLGLSNHSTSQVCNRFFG
HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHH
KSLIDVIQEKRIEHAKIALLDTKKTVLRIGFDVGFNSKNSFIRAFKEVTKLTPTEYRNQN
HHHHHHHHHHHHHHHHEEEEECHHHHHHEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCC
KS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA