| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is lacZ [H]
Identifier: 183222114
GI number: 183222114
Start: 2850028
End: 2851716
Strand: Direct
Name: lacZ [H]
Synonym: LEPBI_I2756
Alternate gene names: 183222114
Gene position: 2850028-2851716 (Clockwise)
Preceding gene: 183222113
Following gene: 183222115
Centisome position: 79.17
GC content: 35.76
Gene sequence:
>1689_bases ATGAAAGTTCCTCACCCAGAATATCCGAGACCACAACTCCAACGAGATAGTTATCTGAATTTAAATGGCGAGTGGTTTTT GGGCCACCATAAACAAGGTGAACCTCTAGAATACCAACATAAAATCATTGTCCCCTTTTCCCCAGAGACAAAGGCGAGTG GATTAGGAAATTTCATCTTAAAACCAGATGAGGTTTTATTTTATAAAAGAGAATTTGAAATTGATGCGAATTTTCTAAAG GAAATCACATTCTTACATTTTGGTGCCGTCGATTATTCTTGCATATGTTATCTCAATGGAATTGAAGTTGGATACCACCA AGGAGGGTTTCTACCTTTTACATTTGATGTGTCAAAGACGATCAAAGTTGGAAAAAATGAAATAAGGCTCACAGTCACAG ACCCAACCGACACGGGGACTCAATCACGAGGAAAACAAAAACTTAAACGAGGTGGGATTTGGTACACACCGCAATCAGGA ATTTGGCAAACCGTTTGGATGGAAAGTGTTTCCAATGATTATATCAAAAGTATCAAAATGATTCCCAATATAGAAACAAA ATCTTTGGAAATCGAAATTGATACCGAAAGTGATGTCGTATCCATCCAAATTCTCGATGGGGAAGAGGTAATCGCAGAAG GTTCCAAAAAGCACGCAACATTATCGATTCCTAATATGATTTTATGGACTCCAGAAAATCCAAAATTGTATAACATATCA ATACAAACAAAAGATGACAAGGTGTTCTCATACTTTGGGATGAGAAAGTTTTCGATTGGATATGATGGAAAATTCAAACG ATTGTATTTAAACAACAAACCTTATTTTCATAATGGACTATTGGACCAAGGATATTGGTCTGATAGTTTATTAACACCAC CTGACGATGAATCGATGATAAAAGAGATTAGCCTGATGAAGGAAATGGGTTTTAATACGTTAAGAAAACACATCAAAATT GAACCTTTGCGCTGGTATTATCATTGTGACCGAATTGGAATGTTAGTCTGGCAAGATTTTGTTTGTGGTGGTGGTCCTTA TGAAACATGGAAGGTGGCTTACCTACCTTTCATCGGCTGGAATACTGATGACACAAAACACAGATTTTTAAATCGCACAG ATGAAGTAGGCAAAAAAGAATTTATCTCTGAAATGGACCAGACGGTAAAACTTCTATTCAACACAGTTTCTTTAGCAGTG TGGGTTCTGTTTAATGAAGGTTGGGGACAATTTGATAGCATCCAACTGACTAAACAATTAAAACATTTGGACTCCACAAG GACCATCGATAGTGTGAGCGGTTGGTATGACCAGGGAAAAAATAGTAGTGATCTAAAGAGTTTACACCTTTACTACCAAA AGTTAAAAGTACCTAAAAAAGACCCAAGGGTCATCGTATTATCAGAATTTGGTGGTTATTCATTAAAAACTGAAGGTCAT GTATTTGATGAGAAAAAATTATTTGGCTACAAAATTCTACCGGATAAAGCCACTTTACAATGGGAGTATCAAAAACTGAT TGAAAATGAACTTTTACCACTGATAAACAAAGGTCTTAGTGCATCGATCTATACCCAAGTAAGTGATGTAGAAGAGGAAA TCAATGGACTTGTAACATACGATAGAAAGGTAGTTAAGTTTGATATTCCATTTATGAAAGAACTCAATTCAAAACTTAAA TTTAATTAA
Upstream 100 bases:
>100_bases CGCATGTCCCGTCTCCAGAAATTTTTATCACTGGAGCAATCTTTTGTTTATTGATATTTTATCCACTCACACTGATTCGA AAAGGAAATTTGAAATCAAC
Downstream 100 bases:
>100_bases TCTATCAGAATGTCATTAGAAACTGTTCTTTATACGATCTTCGCTATCATTCTGTTTGGATTTATTTTTTATTATTTTGT TGATGTGATTGAGTTTCCAA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-gal; Lactase [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MKVPHPEYPRPQLQRDSYLNLNGEWFLGHHKQGEPLEYQHKIIVPFSPETKASGLGNFILKPDEVLFYKREFEIDANFLK EITFLHFGAVDYSCICYLNGIEVGYHQGGFLPFTFDVSKTIKVGKNEIRLTVTDPTDTGTQSRGKQKLKRGGIWYTPQSG IWQTVWMESVSNDYIKSIKMIPNIETKSLEIEIDTESDVVSIQILDGEEVIAEGSKKHATLSIPNMILWTPENPKLYNIS IQTKDDKVFSYFGMRKFSIGYDGKFKRLYLNNKPYFHNGLLDQGYWSDSLLTPPDDESMIKEISLMKEMGFNTLRKHIKI EPLRWYYHCDRIGMLVWQDFVCGGGPYETWKVAYLPFIGWNTDDTKHRFLNRTDEVGKKEFISEMDQTVKLLFNTVSLAV WVLFNEGWGQFDSIQLTKQLKHLDSTRTIDSVSGWYDQGKNSSDLKSLHLYYQKLKVPKKDPRVIVLSEFGGYSLKTEGH VFDEKKLFGYKILPDKATLQWEYQKLIENELLPLINKGLSASIYTQVSDVEEEINGLVTYDRKVVKFDIPFMKELNSKLK FN
Sequences:
>Translated_562_residues MKVPHPEYPRPQLQRDSYLNLNGEWFLGHHKQGEPLEYQHKIIVPFSPETKASGLGNFILKPDEVLFYKREFEIDANFLK EITFLHFGAVDYSCICYLNGIEVGYHQGGFLPFTFDVSKTIKVGKNEIRLTVTDPTDTGTQSRGKQKLKRGGIWYTPQSG IWQTVWMESVSNDYIKSIKMIPNIETKSLEIEIDTESDVVSIQILDGEEVIAEGSKKHATLSIPNMILWTPENPKLYNIS IQTKDDKVFSYFGMRKFSIGYDGKFKRLYLNNKPYFHNGLLDQGYWSDSLLTPPDDESMIKEISLMKEMGFNTLRKHIKI EPLRWYYHCDRIGMLVWQDFVCGGGPYETWKVAYLPFIGWNTDDTKHRFLNRTDEVGKKEFISEMDQTVKLLFNTVSLAV WVLFNEGWGQFDSIQLTKQLKHLDSTRTIDSVSGWYDQGKNSSDLKSLHLYYQKLKVPKKDPRVIVLSEFGGYSLKTEGH VFDEKKLFGYKILPDKATLQWEYQKLIENELLPLINKGLSASIYTQVSDVEEEINGLVTYDRKVVKFDIPFMKELNSKLK FN >Mature_562_residues MKVPHPEYPRPQLQRDSYLNLNGEWFLGHHKQGEPLEYQHKIIVPFSPETKASGLGNFILKPDEVLFYKREFEIDANFLK EITFLHFGAVDYSCICYLNGIEVGYHQGGFLPFTFDVSKTIKVGKNEIRLTVTDPTDTGTQSRGKQKLKRGGIWYTPQSG IWQTVWMESVSNDYIKSIKMIPNIETKSLEIEIDTESDVVSIQILDGEEVIAEGSKKHATLSIPNMILWTPENPKLYNIS IQTKDDKVFSYFGMRKFSIGYDGKFKRLYLNNKPYFHNGLLDQGYWSDSLLTPPDDESMIKEISLMKEMGFNTLRKHIKI EPLRWYYHCDRIGMLVWQDFVCGGGPYETWKVAYLPFIGWNTDDTKHRFLNRTDEVGKKEFISEMDQTVKLLFNTVSLAV WVLFNEGWGQFDSIQLTKQLKHLDSTRTIDSVSGWYDQGKNSSDLKSLHLYYQKLKVPKKDPRVIVLSEFGGYSLKTEGH VFDEKKLFGYKILPDKATLQWEYQKLIENELLPLINKGLSASIYTQVSDVEEEINGLVTYDRKVVKFDIPFMKELNSKLK FN
Specific function: Unknown
COG id: COG3250
COG function: function code G; Beta-galactosidase/beta-glucuronidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787903, Length=265, Percent_Identity=24.5283018867925, Blast_Score=78, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003344 - InterPro: IPR008979 - InterPro: IPR006101 - InterPro: IPR013812 - InterPro: IPR006104 - InterPro: IPR006102 - InterPro: IPR006103 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00703 Glyco_hydro_2; PF02836 Glyco_hydro_2_C; PF02837 Glyco_hydro_2_N [H]
EC number: =3.2.1.23 [H]
Molecular weight: Translated: 65216; Mature: 65216
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVPHPEYPRPQLQRDSYLNLNGEWFLGHHKQGEPLEYQHKIIVPFSPETKASGLGNFIL CCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE KPDEVLFYKREFEIDANFLKEITFLHFGAVDYSCICYLNGIEVGYHQGGFLPFTFDVSKT CCCEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEEECEEEEECCCCEEEEEEECCHH IKVGKNEIRLTVTDPTDTGTQSRGKQKLKRGGIWYTPQSGIWQTVWMESVSNDYIKSIKM EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCHHHHHHHHH IPNIETKSLEIEIDTESDVVSIQILDGEEVIAEGSKKHATLSIPNMILWTPENPKLYNIS CCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE IQTKDDKVFSYFGMRKFSIGYDGKFKRLYLNNKPYFHNGLLDQGYWSDSLLTPPDDESMI EEECCCCEEHHHCEEEEECCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHH KEISLMKEMGFNTLRKHIKIEPLRWYYHCDRIGMLVWQDFVCGGGPYETWKVAYLPFIGW HHHHHHHHHCHHHHHHHEEECEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEECC NTDDTKHRFLNRTDEVGKKEFISEMDQTVKLLFNTVSLAVWVLFNEGWGQFDSIQLTKQL CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH KHLDSTRTIDSVSGWYDQGKNSSDLKSLHLYYQKLKVPKKDPRVIVLSEFGGYSLKTEGH HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCC VFDEKKLFGYKILPDKATLQWEYQKLIENELLPLINKGLSASIYTQVSDVEEEINGLVTY EECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEE DRKVVKFDIPFMKELNSKLKFN CCEEEEECCHHHHHHHHHCCCC >Mature Secondary Structure MKVPHPEYPRPQLQRDSYLNLNGEWFLGHHKQGEPLEYQHKIIVPFSPETKASGLGNFIL CCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEE KPDEVLFYKREFEIDANFLKEITFLHFGAVDYSCICYLNGIEVGYHQGGFLPFTFDVSKT CCCEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEEEEECEEEEECCCCEEEEEEECCHH IKVGKNEIRLTVTDPTDTGTQSRGKQKLKRGGIWYTPQSGIWQTVWMESVSNDYIKSIKM EECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHCHHHHHHHHH IPNIETKSLEIEIDTESDVVSIQILDGEEVIAEGSKKHATLSIPNMILWTPENPKLYNIS CCCCCCCEEEEEEECCCCEEEEEEECCHHHHHCCCCCCEEEECCEEEEECCCCCEEEEEE IQTKDDKVFSYFGMRKFSIGYDGKFKRLYLNNKPYFHNGLLDQGYWSDSLLTPPDDESMI EEECCCCEEHHHCEEEEECCCCCCEEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHH KEISLMKEMGFNTLRKHIKIEPLRWYYHCDRIGMLVWQDFVCGGGPYETWKVAYLPFIGW HHHHHHHHHCHHHHHHHEEECEEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEEEEECC NTDDTKHRFLNRTDEVGKKEFISEMDQTVKLLFNTVSLAVWVLFNEGWGQFDSIQLTKQL CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHH KHLDSTRTIDSVSGWYDQGKNSSDLKSLHLYYQKLKVPKKDPRVIVLSEFGGYSLKTEGH HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCC VFDEKKLFGYKILPDKATLQWEYQKLIENELLPLINKGLSASIYTQVSDVEEEINGLVTY EECCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEE DRKVVKFDIPFMKELNSKLKFN CCEEEEECCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA