| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is ydzA [H]
Identifier: 183222111
GI number: 183222111
Start: 2846735
End: 2847058
Strand: Direct
Name: ydzA [H]
Synonym: LEPBI_I2753
Alternate gene names: 183222111
Gene position: 2846735-2847058 (Clockwise)
Preceding gene: 183222105
Following gene: 183222112
Centisome position: 79.08
GC content: 34.57
Gene sequence:
>324_bases ATGTTCACGTTGCTACAAACCAAACTAGGTCGATTCCGAATTTTGGCATTCTTGGAAGGTATATCATTTTTAACGATTTT ATTTGTGACCATGCCCCTTAAGTATCTCTACCAAAATCCAGAGCCCAATAAAATTGTAGGCCTTGTCCATGGATTATTGT TTTTATTGTATTTGGTAGAATTATTCCAAGTGAAAGTCGAACTGAATTGGAAAATGAAAAAAACCTTCCTTGCCGCTTTG GCTTCCGTCATTCCATTTGGAACGTTTTGGGCAGAAAAATACTTATACTTAAAAACAGATGAAGATGATTTAAAAAATCA ATAG
Upstream 100 bases:
>100_bases TCTTTTTTAGAGCATTAAGACACTAGGTCTAGGCAAAGAAAGTACGGACGAAAACTAGGTATCACTCGAAGTTGGTGAAA GTAAAAATCTGAGGAGTTTT
Downstream 100 bases:
>100_bases TAAGTTATGAAAACAAAAATTTTAATTTCTTTCCTTGTCGCTTATCTTTTGTTCGCTGGTTCGACTTGGAGCCAATCCAA AATCATCAAAAAACAAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MFTLLQTKLGRFRILAFLEGISFLTILFVTMPLKYLYQNPEPNKIVGLVHGLLFLLYLVELFQVKVELNWKMKKTFLAAL ASVIPFGTFWAEKYLYLKTDEDDLKNQ
Sequences:
>Translated_107_residues MFTLLQTKLGRFRILAFLEGISFLTILFVTMPLKYLYQNPEPNKIVGLVHGLLFLLYLVELFQVKVELNWKMKKTFLAAL ASVIPFGTFWAEKYLYLKTDEDDLKNQ >Mature_107_residues MFTLLQTKLGRFRILAFLEGISFLTILFVTMPLKYLYQNPEPNKIVGLVHGLLFLLYLVELFQVKVELNWKMKKTFLAAL ASVIPFGTFWAEKYLYLKTDEDDLKNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12552; Mature: 12552
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTLLQTKLGRFRILAFLEGISFLTILFVTMPLKYLYQNPEPNKIVGLVHGLLFLLYLVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LFQVKVELNWKMKKTFLAALASVIPFGTFWAEKYLYLKTDEDDLKNQ HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCHHCCCCC >Mature Secondary Structure MFTLLQTKLGRFRILAFLEGISFLTILFVTMPLKYLYQNPEPNKIVGLVHGLLFLLYLVE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LFQVKVELNWKMKKTFLAALASVIPFGTFWAEKYLYLKTDEDDLKNQ HHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHEEEEECCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]