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The map label for this gene is 183222086

Identifier: 183222086

GI number: 183222086

Start: 2820833

End: 2821570

Strand: Direct

Name: 183222086

Synonym: LEPBI_I2728

Alternate gene names: NA

Gene position: 2820833-2821570 (Clockwise)

Preceding gene: 183222085

Following gene: 183222090

Centisome position: 78.36

GC content: 40.51

Gene sequence:

>738_bases
TTGATTTGTTGGGCATCTACAATATTTGGAATGAAACCTAAAAAACCAAATCCACAAAATCACTTTCGAAAAAAGGTAAG
AGCCCTTCTCCCTCTCCTCTTTTTCCTTGTCGCTTTATCACTTGTTATGTGTAAGGAAACAGAGTCCAAACCAGAAAGAG
ATTCCCTTCCTTATTTTTTAGGAAAGGATTTTGATCCTGTTTGGACAAAGGATCCGAGTGCCTTAGAAGGTCTGAAACAA
ATCCCAGAAGGATTCCAACTCACAAACCATTTGGGGCAAACTTACCGATGGAAAGACCATCCCAAACCAGTGAGCCTTGT
TGTCTTTTTTTATGCGACCTGCCGAGGGATATGTCCCCTCATCACAAAAAACATCATCCAAATCCAACCTGATTTGGCCG
AGTTTCCCAATTTAGAAATTCATTCCATCTCCATCAATCCAAAGGAAGATACACCGAGTGTCCTATCAAACTATCGAAAG
CTCTACAAAATCCAAAACCCAAATTGGTTTTTCCATACGGGTGAGGTGGAAGTGATTGAGTCCTTTGCCAAATCCACCTG
TGGTGCCGAGGTGGAAGGATTTTCTTTGGAAAAAAACAAGTATGAGTTTGTTCATACAGAAAATATTTTTTTGTTTGATG
GGAAAAACTACTTACGTGGAATTTACAGAGCCAAAGGGACGGGCGACATACAAAGGTTAGTCGCCGACCTTCGGTTGATA
ACGAAAAAACAAAACTGA

Upstream 100 bases:

>100_bases
ACCATGTGTTTTTGGAATCGGGAGAAAGTTTTGGAAAACCGGGTAGTAAACTTTGTGAACCCGTTCCAGAAAACAACGTA
GAAGAGAACGGCACCAAACT

Downstream 100 bases:

>100_bases
ATTCAAAATCCCAATCGGAATGACCTATCCCACGAAAGGAACTAAATTTCGATTTAGTTTTTGATTTTATACCCAGTGCG
AAAGATAAGCCATGTCACAA

Product: putative signal peptide

Products: NA

Alternate protein names: SCO2/SenC Family Protein; Signal Peptide; Cytochrome C Oxidase Biogenesis Protein; Electron Transport /Senc

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MICWASTIFGMKPKKPNPQNHFRKKVRALLPLLFFLVALSLVMCKETESKPERDSLPYFLGKDFDPVWTKDPSALEGLKQ
IPEGFQLTNHLGQTYRWKDHPKPVSLVVFFYATCRGICPLITKNIIQIQPDLAEFPNLEIHSISINPKEDTPSVLSNYRK
LYKIQNPNWFFHTGEVEVIESFAKSTCGAEVEGFSLEKNKYEFVHTENIFLFDGKNYLRGIYRAKGTGDIQRLVADLRLI
TKKQN

Sequences:

>Translated_245_residues
MICWASTIFGMKPKKPNPQNHFRKKVRALLPLLFFLVALSLVMCKETESKPERDSLPYFLGKDFDPVWTKDPSALEGLKQ
IPEGFQLTNHLGQTYRWKDHPKPVSLVVFFYATCRGICPLITKNIIQIQPDLAEFPNLEIHSISINPKEDTPSVLSNYRK
LYKIQNPNWFFHTGEVEVIESFAKSTCGAEVEGFSLEKNKYEFVHTENIFLFDGKNYLRGIYRAKGTGDIQRLVADLRLI
TKKQN
>Mature_245_residues
MICWASTIFGMKPKKPNPQNHFRKKVRALLPLLFFLVALSLVMCKETESKPERDSLPYFLGKDFDPVWTKDPSALEGLKQ
IPEGFQLTNHLGQTYRWKDHPKPVSLVVFFYATCRGICPLITKNIIQIQPDLAEFPNLEIHSISINPKEDTPSVLSNYRK
LYKIQNPNWFFHTGEVEVIESFAKSTCGAEVEGFSLEKNKYEFVHTENIFLFDGKNYLRGIYRAKGTGDIQRLVADLRLI
TKKQN

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28257; Mature: 28257

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICWASTIFGMKPKKPNPQNHFRKKVRALLPLLFFLVALSLVMCKETESKPERDSLPYFL
CEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
GKDFDPVWTKDPSALEGLKQIPEGFQLTNHLGQTYRWKDHPKPVSLVVFFYATCRGICPL
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHH
ITKNIIQIQPDLAEFPNLEIHSISINPKEDTPSVLSNYRKLYKIQNPNWFFHTGEVEVIE
HHHHHHEECCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCEEEECCHHHHHH
SFAKSTCGAEVEGFSLEKNKYEFVHTENIFLFDGKNYLRGIYRAKGTGDIQRLVADLRLI
HHHHHHCCCCCCCEECCCCCEEEEEECEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHH
TKKQN
HCCCC
>Mature Secondary Structure
MICWASTIFGMKPKKPNPQNHFRKKVRALLPLLFFLVALSLVMCKETESKPERDSLPYFL
CEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH
GKDFDPVWTKDPSALEGLKQIPEGFQLTNHLGQTYRWKDHPKPVSLVVFFYATCRGICPL
CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHH
ITKNIIQIQPDLAEFPNLEIHSISINPKEDTPSVLSNYRKLYKIQNPNWFFHTGEVEVIE
HHHHHHEECCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCEEEECCHHHHHH
SFAKSTCGAEVEGFSLEKNKYEFVHTENIFLFDGKNYLRGIYRAKGTGDIQRLVADLRLI
HHHHHHCCCCCCCEECCCCCEEEEEECEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHH
TKKQN
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA