| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222057
Identifier: 183222057
GI number: 183222057
Start: 2795524
End: 2797170
Strand: Direct
Name: 183222057
Synonym: LEPBI_I2699
Alternate gene names: NA
Gene position: 2795524-2797170 (Clockwise)
Preceding gene: 183222056
Following gene: 183222058
Centisome position: 77.66
GC content: 38.8
Gene sequence:
>1647_bases GTGGATTTTGTCAAGGTTTGGGAATCAAAATGGAATGAGGCACTCAAACTTTGGAGTGATTATGTAAAACTCACTCCGGC AAAATTTTTGTTCTCAGAATATGAAGAGAAAGAGGAAGGTTTGACCGCGTCCTTTGCAGCCATTCGTCTAAAAGACCACC GCGTCCTTTTATCCGTCAAACAAATCAAATCCTACCAACTCGAAGATTATGCGTTAGAGATTTTAGGCCATGAGATAGGC CACCATGTATATTGTCCTGGGGATTTGGCAGACCAAGCAAAATTGATTTATATTACAAATCTAGCGATGCCTAGATTAAA CCACCTAACATCAATGATAGTCAATATCTACGAAGATTTGTTTATCAATGACCATCTTAAAAAACAGAACCATTTACGAA TGGAAGAAGTATATCAAAAATTGGGCAAACAAAAAGATCCATTTTGGAATTTTTATATGAGAACCTATGAATTATTATGG GCTCTTCCTTCTTCCACACTCACCGAAGGTTCGTTATGTGACCAAATCCAATCTGATGCAGCTCTTGTTTCGCGGATGAT TCGAAATTTTCCAAATGATTGGGCAAAAGGGATGTTTGATTTTGCAAGCATTTGTTTCCCCTATTTTTTTGGAGAAAATA ACCAAATCAATTCCAACTCCATCAAAATCCTTATGGATACAATTGATGCAGGCAAAGGGATGACTCCACCATCTGGGATC ACGGAAGTGGAAATCTCTTCTGAATTATTTCCAATGGATGGCATCACTGGTTCCAAAAAAGCACTCACACCAGCAGAATA TTCCACCATCTGCAAAAGTATGGGAATCGAAGCAGACATCTCAGAAATCACTTATCGGTATTACAAAGACAAAGCATTGC CCTATCTTGTTCCTTTCCCTGAACGAAAGACTCCAGGCGCAAAAGAGGAAATTTTAGAAGGGAATGATTTATGGGACCCT GGATCACCAATTGAAAAAATCAATTGGATGGAATCGACAATCAAAAGTCCCATCATCATCCCAGGTTACACAACCGTAGA AGATGTGTATGGTGAAACTACTTCGAATGAAATCAAAGTAAATCCAATCGACTTAGACTTGTTTGTTGATTGTTCTGGCT CCATGCCAAATCCACAAAACGATTTATCCTATCTAACTTTAGCAGGGGCCATCATTGCTTTATCGGCATTAAAAACAGGA AGTTCTGTTCGAGTGACCTTATGGTCAGGAGAAAAAGAATTTTTAGTGACCGATGGTTTTATTAAAAATGAAAAAGAAAT CTTAAAAGTGCTCACGGGTTACTTTGGTGGAGGGACATGTTTTCCTTTAGAACTTTTGGAAGATCAATACAAAGTTGAAC CCAAACGAAAACGACACATACTTGTGATCTCCGATGATGGCATTGACACTATGTTCACTCAAAGCTATCCACGCGACCCG CGAGCCATCGTAAAAAATGCGTTAGAAAAGGCGAATGGTGGAGGATCGATGGTGTTACAACTCTACCAACCAAACAAAAA TCCAGTGGTGATTGAATTACAACAATCAGGTTGGGAGATCTACCCCATCCAAACTTGGACTGACTTAATCAAATTTAGCA AAGATTTTGTGGAAAGGAATTATGTTAGAAATCAGGCATTACGTTAA
Upstream 100 bases:
>100_bases TACAAGCCATGTAGTTTCAACATTTGAAATGGATTCTTATACGATTGTGACGTTAAAAAATTCCTACCAATTGTATTTGT TTTATGTTGGGAGAACCTAA
Downstream 100 bases:
>100_bases ACTCGTCCTCAATACCCCTTTCCACCAGGTGGATTTGGGTTCACTCTCCTTAGATGCCCTTTGGTTTGATGTGTTATTTT CTAGAACCAAAGAACGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MDFVKVWESKWNEALKLWSDYVKLTPAKFLFSEYEEKEEGLTASFAAIRLKDHRVLLSVKQIKSYQLEDYALEILGHEIG HHVYCPGDLADQAKLIYITNLAMPRLNHLTSMIVNIYEDLFINDHLKKQNHLRMEEVYQKLGKQKDPFWNFYMRTYELLW ALPSSTLTEGSLCDQIQSDAALVSRMIRNFPNDWAKGMFDFASICFPYFFGENNQINSNSIKILMDTIDAGKGMTPPSGI TEVEISSELFPMDGITGSKKALTPAEYSTICKSMGIEADISEITYRYYKDKALPYLVPFPERKTPGAKEEILEGNDLWDP GSPIEKINWMESTIKSPIIIPGYTTVEDVYGETTSNEIKVNPIDLDLFVDCSGSMPNPQNDLSYLTLAGAIIALSALKTG SSVRVTLWSGEKEFLVTDGFIKNEKEILKVLTGYFGGGTCFPLELLEDQYKVEPKRKRHILVISDDGIDTMFTQSYPRDP RAIVKNALEKANGGGSMVLQLYQPNKNPVVIELQQSGWEIYPIQTWTDLIKFSKDFVERNYVRNQALR
Sequences:
>Translated_548_residues MDFVKVWESKWNEALKLWSDYVKLTPAKFLFSEYEEKEEGLTASFAAIRLKDHRVLLSVKQIKSYQLEDYALEILGHEIG HHVYCPGDLADQAKLIYITNLAMPRLNHLTSMIVNIYEDLFINDHLKKQNHLRMEEVYQKLGKQKDPFWNFYMRTYELLW ALPSSTLTEGSLCDQIQSDAALVSRMIRNFPNDWAKGMFDFASICFPYFFGENNQINSNSIKILMDTIDAGKGMTPPSGI TEVEISSELFPMDGITGSKKALTPAEYSTICKSMGIEADISEITYRYYKDKALPYLVPFPERKTPGAKEEILEGNDLWDP GSPIEKINWMESTIKSPIIIPGYTTVEDVYGETTSNEIKVNPIDLDLFVDCSGSMPNPQNDLSYLTLAGAIIALSALKTG SSVRVTLWSGEKEFLVTDGFIKNEKEILKVLTGYFGGGTCFPLELLEDQYKVEPKRKRHILVISDDGIDTMFTQSYPRDP RAIVKNALEKANGGGSMVLQLYQPNKNPVVIELQQSGWEIYPIQTWTDLIKFSKDFVERNYVRNQALR >Mature_548_residues MDFVKVWESKWNEALKLWSDYVKLTPAKFLFSEYEEKEEGLTASFAAIRLKDHRVLLSVKQIKSYQLEDYALEILGHEIG HHVYCPGDLADQAKLIYITNLAMPRLNHLTSMIVNIYEDLFINDHLKKQNHLRMEEVYQKLGKQKDPFWNFYMRTYELLW ALPSSTLTEGSLCDQIQSDAALVSRMIRNFPNDWAKGMFDFASICFPYFFGENNQINSNSIKILMDTIDAGKGMTPPSGI TEVEISSELFPMDGITGSKKALTPAEYSTICKSMGIEADISEITYRYYKDKALPYLVPFPERKTPGAKEEILEGNDLWDP GSPIEKINWMESTIKSPIIIPGYTTVEDVYGETTSNEIKVNPIDLDLFVDCSGSMPNPQNDLSYLTLAGAIIALSALKTG SSVRVTLWSGEKEFLVTDGFIKNEKEILKVLTGYFGGGTCFPLELLEDQYKVEPKRKRHILVISDDGIDTMFTQSYPRDP RAIVKNALEKANGGGSMVLQLYQPNKNPVVIELQQSGWEIYPIQTWTDLIKFSKDFVERNYVRNQALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62417; Mature: 62417
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFVKVWESKWNEALKLWSDYVKLTPAKFLFSEYEEKEEGLTASFAAIRLKDHRVLLSVK CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEHH QIKSYQLEDYALEILGHEIGHHVYCPGDLADQAKLIYITNLAMPRLNHLTSMIVNIYEDL HHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FINDHLKKQNHLRMEEVYQKLGKQKDPFWNFYMRTYELLWALPSSTLTEGSLCDQIQSDA HHCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ALVSRMIRNFPNDWAKGMFDFASICFPYFFGENNQINSNSIKILMDTIDAGKGMTPPSGI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC TEVEISSELFPMDGITGSKKALTPAEYSTICKSMGIEADISEITYRYYKDKALPYLVPFP EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCC ERKTPGAKEEILEGNDLWDPGSPIEKINWMESTIKSPIIIPGYTTVEDVYGETTSNEIKV CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCEEE NPIDLDLFVDCSGSMPNPQNDLSYLTLAGAIIALSALKTGSSVRVTLWSGEKEFLVTDGF EEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCC IKNEKEILKVLTGYFGGGTCFPLELLEDQYKVEPKRKRHILVISDDGIDTMFTQSYPRDP CCCHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCH RAIVKNALEKANGGGSMVLQLYQPNKNPVVIELQQSGWEIYPIQTWTDLIKFSKDFVERN HHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH YVRNQALR HHHHHCCC >Mature Secondary Structure MDFVKVWESKWNEALKLWSDYVKLTPAKFLFSEYEEKEEGLTASFAAIRLKDHRVLLSVK CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEEECCEEEEEHH QIKSYQLEDYALEILGHEIGHHVYCPGDLADQAKLIYITNLAMPRLNHLTSMIVNIYEDL HHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH FINDHLKKQNHLRMEEVYQKLGKQKDPFWNFYMRTYELLWALPSSTLTEGSLCDQIQSDA HHCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ALVSRMIRNFPNDWAKGMFDFASICFPYFFGENNQINSNSIKILMDTIDAGKGMTPPSGI HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCC TEVEISSELFPMDGITGSKKALTPAEYSTICKSMGIEADISEITYRYYKDKALPYLVPFP EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEECCC ERKTPGAKEEILEGNDLWDPGSPIEKINWMESTIKSPIIIPGYTTVEDVYGETTSNEIKV CCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCEEE NPIDLDLFVDCSGSMPNPQNDLSYLTLAGAIIALSALKTGSSVRVTLWSGEKEFLVTDGF EEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCC IKNEKEILKVLTGYFGGGTCFPLELLEDQYKVEPKRKRHILVISDDGIDTMFTQSYPRDP CCCHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCH RAIVKNALEKANGGGSMVLQLYQPNKNPVVIELQQSGWEIYPIQTWTDLIKFSKDFVERN HHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH YVRNQALR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA