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The map label for this gene is yfcH [H]

Identifier: 183222053

GI number: 183222053

Start: 2791445

End: 2792359

Strand: Reverse

Name: yfcH [H]

Synonym: LEPBI_I2695

Alternate gene names: 183222053

Gene position: 2792359-2791445 (Counterclockwise)

Preceding gene: 183222061

Following gene: 183222052

Centisome position: 77.57

GC content: 40.33

Gene sequence:

>915_bases
ATGAAAATAGGAATTTTAGGCGGAACAGGCCTCATTGGAAAGTCTTTGATTCAAACGGCGATACAAAAAGGCCATCGCTT
CCGAGTATTTTCGCGCCAAACATCACTCCCCAAATCACTTTCCTCATTTCCTGAGATTGAATTTGTCACATGCCTTCTAC
CACAATCCTCCGATTTAGAAAACCTCGACGCCATCATCAATTTAGTTGGAGAGCCTATTGCGGGTGTTAGGTGGACAGAA
GAACGAAAACAATTAATTTCTACTTCTCGGATTGAGTTCACGAGAGGACTTGTCGCTCGTATCCAAGATTTAAAAAACCC
ACCAAAAGTTTTTATCAATGCAAGTGCTGTAGGTTACTATGGAATGTCCGAAACCATCCATCAGTCCTATACGGAAACTT
CGCCACCCGGAGATGATTTTTTGGCGAAACTTTGTGTGGATTGGGAAAACCAAACAAATCCCCTTTTGCCATTAGGAATT
CGGACCATATTACTTCGAACAGGGATTGTCCTTTCTCCAAAAGGTGGGGCATTAGAAAAAATGATCCCTCCATTTTTATT
AGGAGTTGGAGGTTCAATTGCATCTGGAACGCAAGGGATGAGTTGGATCCATATCTTAGATTTTATCAATGCAACCTTAC
ATTTAATGACTTCTTCTACTTCCCAAGGAGCCTACAACTTAGTGTCTCCTAACCCAACAAGTAACGCTGAATTTTCAAAA
CAATTGGCAAAAACCTTGAATCGTCCGAATCTTTTCAAAGTCCCTACATTCGCTATACAAGCGTTATTTGGTGAAGGAAG
TGTGGTGGTAACAAAAGGGCAATATGTTGTTCCAGAACGATTGTTACAATCAGGATATGAGTTTCAGTTTCAAAATTTAA
ACGAAGCGCTCTCAAATCTTTTGGAAAAAAACTGA

Upstream 100 bases:

>100_bases
AATCGGTAATACAATCACAGGTCTCATAGAAAGAAAAACTTATGCTGAATGCGAAAATGGGCTACTTCTTTTTTTATTTA
CACCATACATCGGAGTCATC

Downstream 100 bases:

>100_bases
TTTCTTCTTTTCAAAAGATGAGAAGGGTAAGAGACTGGGTTCAACCTTATCTCGGAGTAAGAAATGAACTCAAAAAAAGT
ATTAGTCTCTCTACTCGCTG

Product: putative NAD dependent epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKIGILGGTGLIGKSLIQTAIQKGHRFRVFSRQTSLPKSLSSFPEIEFVTCLLPQSSDLENLDAIINLVGEPIAGVRWTE
ERKQLISTSRIEFTRGLVARIQDLKNPPKVFINASAVGYYGMSETIHQSYTETSPPGDDFLAKLCVDWENQTNPLLPLGI
RTILLRTGIVLSPKGGALEKMIPPFLLGVGGSIASGTQGMSWIHILDFINATLHLMTSSTSQGAYNLVSPNPTSNAEFSK
QLAKTLNRPNLFKVPTFAIQALFGEGSVVVTKGQYVVPERLLQSGYEFQFQNLNEALSNLLEKN

Sequences:

>Translated_304_residues
MKIGILGGTGLIGKSLIQTAIQKGHRFRVFSRQTSLPKSLSSFPEIEFVTCLLPQSSDLENLDAIINLVGEPIAGVRWTE
ERKQLISTSRIEFTRGLVARIQDLKNPPKVFINASAVGYYGMSETIHQSYTETSPPGDDFLAKLCVDWENQTNPLLPLGI
RTILLRTGIVLSPKGGALEKMIPPFLLGVGGSIASGTQGMSWIHILDFINATLHLMTSSTSQGAYNLVSPNPTSNAEFSK
QLAKTLNRPNLFKVPTFAIQALFGEGSVVVTKGQYVVPERLLQSGYEFQFQNLNEALSNLLEKN
>Mature_304_residues
MKIGILGGTGLIGKSLIQTAIQKGHRFRVFSRQTSLPKSLSSFPEIEFVTCLLPQSSDLENLDAIINLVGEPIAGVRWTE
ERKQLISTSRIEFTRGLVARIQDLKNPPKVFINASAVGYYGMSETIHQSYTETSPPGDDFLAKLCVDWENQTNPLLPLGI
RTILLRTGIVLSPKGGALEKMIPPFLLGVGGSIASGTQGMSWIHILDFINATLHLMTSSTSQGAYNLVSPNPTSNAEFSK
QLAKTLNRPNLFKVPTFAIQALFGEGSVVVTKGQYVVPERLLQSGYEFQFQNLNEALSNLLEKN

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=305, Percent_Identity=34.7540983606557, Blast_Score=171, Evalue=8e-43,
Organism=Escherichia coli, GI1788642, Length=305, Percent_Identity=43.2786885245902, Blast_Score=240, Evalue=1e-64,
Organism=Drosophila melanogaster, GI28573846, Length=305, Percent_Identity=34.0983606557377, Blast_Score=160, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33279; Mature: 33279

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGILGGTGLIGKSLIQTAIQKGHRFRVFSRQTSLPKSLSSFPEIEFVTCLLPQSSDLE
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCHHHHHHCCCEEEEEEECCCCCCHH
NLDAIINLVGEPIAGVRWTEERKQLISTSRIEFTRGLVARIQDLKNPPKVFINASAVGYY
HHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEC
GMSETIHQSYTETSPPGDDFLAKLCVDWENQTNPLLPLGIRTILLRTGIVLSPKGGALEK
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCHHH
MIPPFLLGVGGSIASGTQGMSWIHILDFINATLHLMTSSTSQGAYNLVSPNPTSNAEFSK
HCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHH
QLAKTLNRPNLFKVPTFAIQALFGEGSVVVTKGQYVVPERLLQSGYEFQFQNLNEALSNL
HHHHHCCCCCEEECHHHHHHHHHCCCCEEEECCCEECHHHHHHCCCCEEHHHHHHHHHHH
LEKN
HHCC
>Mature Secondary Structure
MKIGILGGTGLIGKSLIQTAIQKGHRFRVFSRQTSLPKSLSSFPEIEFVTCLLPQSSDLE
CEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCHHHHHHCCCEEEEEEECCCCCCHH
NLDAIINLVGEPIAGVRWTEERKQLISTSRIEFTRGLVARIQDLKNPPKVFINASAVGYY
HHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEC
GMSETIHQSYTETSPPGDDFLAKLCVDWENQTNPLLPLGIRTILLRTGIVLSPKGGALEK
CCHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCHHH
MIPPFLLGVGGSIASGTQGMSWIHILDFINATLHLMTSSTSQGAYNLVSPNPTSNAEFSK
HCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCCCCHHHHH
QLAKTLNRPNLFKVPTFAIQALFGEGSVVVTKGQYVVPERLLQSGYEFQFQNLNEALSNL
HHHHHCCCCCEEECHHHHHHHHHCCCCEEEECCCEECHHHHHHCCCCEEHHHHHHHHHHH
LEKN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]