| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is ctaF
Identifier: 183222039
GI number: 183222039
Start: 2778311
End: 2778907
Strand: Reverse
Name: ctaF
Synonym: LEPBI_I2681
Alternate gene names: NA
Gene position: 2778907-2778311 (Counterclockwise)
Preceding gene: 183222040
Following gene: 183222038
Centisome position: 77.2
GC content: 40.37
Gene sequence:
>597_bases ATGGAATACGTCATCAATTACGGACTCTACTTCATTGCACTCGTAGCTGTTTTTACACCTGTTCTTGGGTTTGGAATCTT TGCTCCAGGGATTGCAACTGCGACCATCTTAGGATTCATCGTCAACTGGTTTGGACAATTTTTCCAAACAGATCGTTTTT CTAAATTCACATCTGAAAACAAAGAGAACAAACTTTTGAAGTTTGTTTTGGGTGATGAAGACCACAAAGAAGACCACGCT TCGGCTTCTATGTGGGTGGAAGACGGGGAAGAGGAAGAAGAGCACGAACACCATGTGATTTCCATCAAAACATATGTGTA TGTCTTACTTGCTCTTTTCTTTGGAACATTTGTCACGGTTTGGGTGGCTCAATACGACCTTGGCAAATGGAATATGATTG TCGCAATGGCTGTGGCAACTTGTAAGGCATTCTTTGTATTGGCTTACTTTATGCATTTAAAGTATGACAATATGCTAAAC CGAGTGATTTTCCTCTCGGCATTTGCTTTCCTTGCACTCCTCTTTGCATTTTCGTTTGGAGATATCATTTCCCGAATTGC ACCGACAACAGAAACACCAGTAAAAACTTTTTTCTAA
Upstream 100 bases:
>100_bases ACTCCTGTAGAAGGTGTGGGTTTGTTTTGGCACGTTGTGGACTTGGTATGGATTTACCTTTTCCCACTTCTATACTTAGT AGGATAATAGGGAATTTAAA
Downstream 100 bases:
>100_bases GAAAATATTAGAAATGAGTGAGAGAAGAAACCCGCCTCTGCGCGGGTTTTTTCGTCTAATGATCTATCGTGATGCAACAC CTCCAGGCGATCCTGTCTAA
Product: cytochrome c oxidase polypeptide IVB
Products: ferricytochrome c; H2O
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MEYVINYGLYFIALVAVFTPVLGFGIFAPGIATATILGFIVNWFGQFFQTDRFSKFTSENKENKLLKFVLGDEDHKEDHA SASMWVEDGEEEEEHEHHVISIKTYVYVLLALFFGTFVTVWVAQYDLGKWNMIVAMAVATCKAFFVLAYFMHLKYDNMLN RVIFLSAFAFLALLFAFSFGDIISRIAPTTETPVKTFF
Sequences:
>Translated_198_residues MEYVINYGLYFIALVAVFTPVLGFGIFAPGIATATILGFIVNWFGQFFQTDRFSKFTSENKENKLLKFVLGDEDHKEDHA SASMWVEDGEEEEEHEHHVISIKTYVYVLLALFFGTFVTVWVAQYDLGKWNMIVAMAVATCKAFFVLAYFMHLKYDNMLN RVIFLSAFAFLALLFAFSFGDIISRIAPTTETPVKTFF >Mature_198_residues MEYVINYGLYFIALVAVFTPVLGFGIFAPGIATATILGFIVNWFGQFFQTDRFSKFTSENKENKLLKFVLGDEDHKEDHA SASMWVEDGEEEEEHEHHVISIKTYVYVLLALFFGTFVTVWVAQYDLGKWNMIVAMAVATCKAFFVLAYFMHLKYDNMLN RVIFLSAFAFLALLFAFSFGDIISRIAPTTETPVKTFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.9.3.1
Molecular weight: Translated: 22663; Mature: 22663
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYVINYGLYFIALVAVFTPVLGFGIFAPGIATATILGFIVNWFGQFFQTDRFSKFTSEN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KENKLLKFVLGDEDHKEDHASASMWVEDGEEEEEHEHHVISIKTYVYVLLALFFGTFVTV HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVAQYDLGKWNMIVAMAVATCKAFFVLAYFMHLKYDNMLNRVIFLSAFAFLALLFAFSFG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIISRIAPTTETPVKTFF HHHHHHCCCCCCCCHHCC >Mature Secondary Structure MEYVINYGLYFIALVAVFTPVLGFGIFAPGIATATILGFIVNWFGQFFQTDRFSKFTSEN CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KENKLLKFVLGDEDHKEDHASASMWVEDGEEEEEHEHHVISIKTYVYVLLALFFGTFVTV HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WVAQYDLGKWNMIVAMAVATCKAFFVLAYFMHLKYDNMLNRVIFLSAFAFLALLFAFSFG HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIISRIAPTTETPVKTFF HHHHHHCCCCCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ferrocytochrome c; O2
Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA