Click here to switch to the map view.

The map label for this gene is 183221996

Identifier: 183221996

GI number: 183221996

Start: 2730592

End: 2731632

Strand: Reverse

Name: 183221996

Synonym: LEPBI_I2637

Alternate gene names: NA

Gene position: 2731632-2730592 (Counterclockwise)

Preceding gene: 183221997

Following gene: 183221994

Centisome position: 75.89

GC content: 39.58

Gene sequence:

>1041_bases
ATGAAACGAATACCAATCAATCTAATACTTGTTATGGGACTTCTCGCATGTCGTTCCTTTTCCCCTGTCGCGTACGAACC
TCCTCTCAAACCAGAACCGATTGGAATTTACGAACCGAATACTGAATTACAAAAAGCAATCCTACTTGCGATTGGAAAAG
TAAAGGGTCTCGAATCTCTCGACGTTGATAGTGATGGAAATATCTACGGTGGTGATAAAGATGGTCGCATCATTCGCATC
ACACTCAAAGGTGAAATCAAAACCATTGCCAAAACTTCAGGACGACCACTTGGGGTACAGTTTGACAAATCAGGAAACCT
GATCATTGCCGATGCCTATAAAGGTTTACTTTCTATGGATAAAGCAGGAAAGATCACCACTTTGGTTTCCGAATATAAGG
GAGTTCCCTTTCAATTCACCGATGATTTAGACATCGCTCAAGATGGGAAAATTTATTTTTCCGATGCTTCAATCTATGAA
CAAAAAGAATATCTCTATGATTTGTTAGAAGCAAGGCCTTATGGTCGTGTGTTTGTATACGATCCTAAAACCAAAGAGAC
ACAATTATTACTCGATCAATTATATTTTGCTAATGGGATCGCATTGTCCAAAAACGAAGATTTCCTTTTAGTCAATGAAA
CTTACCGGTATCGAATCACAAAACTTTGGTTAAAGGGCCCCAAAAAAGGAACTTCCGAGATTGTCATTGAGAACTTACCT
GGATTTCCAGATAATATCACTCGGAATGAAAACGGAGAATTCTGGGTGGCACTTTTTACGGTGAGAAATGACAGAATGGA
CCATATGCATCCTTCTCCTGTTGTGAAAAAGATGATCTATTTTTTACCAAAGTTTTTATGGCCAAAGGCACAACCTTATG
GTTATGCAATGAAAATGGATGGGAATGGAAAGGTGCTCATGACTGTCCAAGACCCAACGGGTGAACATTTAAAAGACATC
ACAAGTGTCCTCGAAAAGAAACGCCAACTCTACATTGGAAGTTTGTACAACGATCGGATTGGGATCTACGTATTGCCTTA
G

Upstream 100 bases:

>100_bases
AAAACGAGCAGTTTGCACCCATGTCAAAAAAAATGAAACGTTGGGTGGATGAAAGATGGGCCATTAAGGATGCGCTGATC
GAAAAGGAGATGAGTTCCAA

Downstream 100 bases:

>100_bases
GCTTTCATATGAAAAAGGCATTTGATATGCCTTAAGGCGTGCATGGCAAATTGTATTCAATCGCACCAAGGGAAACGCCA
CCATCTCCACCTGGCCTTGT

Product: putative strictosidine synthase

Products: NA

Alternate protein names: Gluconolactonase; Strictosidine Synthase Family Protein; Inner-Membrane Translocator; ABC Transporter Permease Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Strictosidine Synthase Conserved Region; Permease Protein Of Sugar ABC Transporter; ABC Transporter; Strictosidine Synthase Subfamily

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKRIPINLILVMGLLACRSFSPVAYEPPLKPEPIGIYEPNTELQKAILLAIGKVKGLESLDVDSDGNIYGGDKDGRIIRI
TLKGEIKTIAKTSGRPLGVQFDKSGNLIIADAYKGLLSMDKAGKITTLVSEYKGVPFQFTDDLDIAQDGKIYFSDASIYE
QKEYLYDLLEARPYGRVFVYDPKTKETQLLLDQLYFANGIALSKNEDFLLVNETYRYRITKLWLKGPKKGTSEIVIENLP
GFPDNITRNENGEFWVALFTVRNDRMDHMHPSPVVKKMIYFLPKFLWPKAQPYGYAMKMDGNGKVLMTVQDPTGEHLKDI
TSVLEKKRQLYIGSLYNDRIGIYVLP

Sequences:

>Translated_346_residues
MKRIPINLILVMGLLACRSFSPVAYEPPLKPEPIGIYEPNTELQKAILLAIGKVKGLESLDVDSDGNIYGGDKDGRIIRI
TLKGEIKTIAKTSGRPLGVQFDKSGNLIIADAYKGLLSMDKAGKITTLVSEYKGVPFQFTDDLDIAQDGKIYFSDASIYE
QKEYLYDLLEARPYGRVFVYDPKTKETQLLLDQLYFANGIALSKNEDFLLVNETYRYRITKLWLKGPKKGTSEIVIENLP
GFPDNITRNENGEFWVALFTVRNDRMDHMHPSPVVKKMIYFLPKFLWPKAQPYGYAMKMDGNGKVLMTVQDPTGEHLKDI
TSVLEKKRQLYIGSLYNDRIGIYVLP
>Mature_346_residues
MKRIPINLILVMGLLACRSFSPVAYEPPLKPEPIGIYEPNTELQKAILLAIGKVKGLESLDVDSDGNIYGGDKDGRIIRI
TLKGEIKTIAKTSGRPLGVQFDKSGNLIIADAYKGLLSMDKAGKITTLVSEYKGVPFQFTDDLDIAQDGKIYFSDASIYE
QKEYLYDLLEARPYGRVFVYDPKTKETQLLLDQLYFANGIALSKNEDFLLVNETYRYRITKLWLKGPKKGTSEIVIENLP
GFPDNITRNENGEFWVALFTVRNDRMDHMHPSPVVKKMIYFLPKFLWPKAQPYGYAMKMDGNGKVLMTVQDPTGEHLKDI
TSVLEKKRQLYIGSLYNDRIGIYVLP

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24308201, Length=340, Percent_Identity=34.4117647058824, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17542364, Length=353, Percent_Identity=28.6118980169972, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17534469, Length=355, Percent_Identity=28.7323943661972, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI193207213, Length=328, Percent_Identity=28.6585365853659, Blast_Score=124, Evalue=6e-29,
Organism=Drosophila melanogaster, GI17137194, Length=259, Percent_Identity=37.4517374517375, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24650914, Length=364, Percent_Identity=28.2967032967033, Blast_Score=132, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39209; Mature: 39209

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIPINLILVMGLLACRSFSPVAYEPPLKPEPIGIYEPNTELQKAILLAIGKVKGLESL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC
DVDSDGNIYGGDKDGRIIRITLKGEIKTIAKTSGRPLGVQFDKSGNLIIADAYKGLLSMD
CCCCCCCEECCCCCCEEEEEEECCCEEEEHHCCCCEEEEEECCCCCEEEECCHHHHHHCC
KAGKITTLVSEYKGVPFQFTDDLDIAQDGKIYFSDASIYEQKEYLYDLLEARPYGRVFVY
CCCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEE
DPKTKETQLLLDQLYFANGIALSKNEDFLLVNETYRYRITKLWLKGPKKGTSEIVIENLP
CCCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCEEEEECCC
GFPDNITRNENGEFWVALFTVRNDRMDHMHPSPVVKKMIYFLPKFLWPKAQPYGYAMKMD
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GNGKVLMTVQDPTGEHLKDITSVLEKKRQLYIGSLYNDRIGIYVLP
CCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKRIPINLILVMGLLACRSFSPVAYEPPLKPEPIGIYEPNTELQKAILLAIGKVKGLESL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCC
DVDSDGNIYGGDKDGRIIRITLKGEIKTIAKTSGRPLGVQFDKSGNLIIADAYKGLLSMD
CCCCCCCEECCCCCCEEEEEEECCCEEEEHHCCCCEEEEEECCCCCEEEECCHHHHHHCC
KAGKITTLVSEYKGVPFQFTDDLDIAQDGKIYFSDASIYEQKEYLYDLLEARPYGRVFVY
CCCCHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEEE
DPKTKETQLLLDQLYFANGIALSKNEDFLLVNETYRYRITKLWLKGPKKGTSEIVIENLP
CCCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCEEEEEEEEEECCCCCCCCEEEEECCC
GFPDNITRNENGEFWVALFTVRNDRMDHMHPSPVVKKMIYFLPKFLWPKAQPYGYAMKMD
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
GNGKVLMTVQDPTGEHLKDITSVLEKKRQLYIGSLYNDRIGIYVLP
CCCEEEEEEECCCCHHHHHHHHHHHHHHHEEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA