| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221947
Identifier: 183221947
GI number: 183221947
Start: 2672735
End: 2674228
Strand: Direct
Name: 183221947
Synonym: LEPBI_I2586
Alternate gene names: NA
Gene position: 2672735-2674228 (Clockwise)
Preceding gene: 183221940
Following gene: 183221948
Centisome position: 74.25
GC content: 42.57
Gene sequence:
>1494_bases ATGATTCAAAAATGGATCCAAACACTGACTGCTTTCCTCCTACTTTCCTTCTCGGTTTCCTGTGTCGAAAAGAAAGAAGA CAAAAACACTTTACTAGCCGCTCTGCTTTACTTGGCCGCAAACCAAATCAAAGTCAATTCTGCCACTGATCTGGTGAACG AATCGGCCGATGATTACAACCAGAACAATTGGGGACTCATCACCCCGCAGACCTTGGCTCGATTTGTCACAAATTGGCCC GCAAACAAACCAAGTCATATCACAGGAAACCTCATCATCTTACAAACGGATGATGCGAATCGTGTTGCTGGCGGGGCTGC TTCCGCATACGTAGCAGAAAATCCTGGTCAAGGTGTCTATGTATACTTACTTGACGATTATAAACCGGCAGATTTACCAA GTGGTGGTTTTCGATTCAACCAAACAAGAGATACCGGCTTATTTACAAACTCTGTCCGTTATCAAGCAAATGGTCAGTTT GTGGATGATTGGCTAAAAACCTTTGGAATTAATCTCTCAAAAGACTTAGTTGTATTTGCGGTAGGTACTGGAAATGGAAT TTCTGGTGGTGCCTATCCTGGCAAAGCTGTAGGGGCCGGTGCTGTCCAAGATATCACTCGTGGCGTTTATTGGTTACGTT ATTGGGGGGCTGAAATCAAAAACCTCGCGATACTCAATGGGAACCTAAACAAAAAAGCAACTGGTGCTGGAATCCCACTT TCGACAAGTCGTTCCGGTATCAACTTAGAACGAAACGGTGGATTCTCCGTAAAACAACTGCGAGTCGATAATACGGTTCT TACCTTGGGCCTTGAGGATATATATGAGATTGCAAAAACTGGAGGAAATGCAAATCTCTCTGGTCTCACTGCTAAACAAC AAATTATCGATGCAAGACCAGCGACTCAATATGATGGATCAGCAGATGGATTGAATGTGCCGAGAAATTTACTTGTTGCG AATCCTGCGAGCCAAGCTTATATCACAACTTCCTACCAATCGTCCGGTGCACCTTCCGCATCAGCAGGGAACCAAACTTT TGTGCCTTTCGAAGGAAGTATCAAATCCTCAAAAACATTTCCTTGGTCTGATCTACTAAAAGATAATGCAGATGGATATG AATATCTGGATAAAGCTGCACTTAAAACACTGTTTAATACAACAAGAGCTGTTTACACGCCGGGAGCTACAATAGTTAGT CAATGCCGAACCAATTTCGAAGCACAAGTCAATGGATTTGCCTCTTTGAATATTCTCGGATACCCAACAGTGTATTATGA TGGTTCTCTTGTGGAATGGACAGCACTTGTCGCAGGACATGGAACATCATCCATCAACCAAATACCAACCGATTTTAAAT GGAGAACTGATAACACGAGTGTATCAAACTTCCTATGGTATAACAACGCTACACATGTTGTACGTCCCAATGTCAATCTA ACGGCAACCACCACAAAAAAATTCATTCAAGAAGATAAGGCTTATAAGTACTAA
Upstream 100 bases:
>100_bases TCCATTTTAGCAGATTTATATTCCATTATAACAGAAGAAGCTTCCCTTCCTAACCAGGAACACCAAAGTCAACTCTAAGA AAAAAATAAAGGAGAACTCC
Downstream 100 bases:
>100_bases TCTCTTTCCCAGTTTGCACACTTCGTCTCCTGGCATCTGCCGGGAGACATTCTTTTTGCTTTTTAAAATCCCTTTGCAAA AATGTTTTTGTCTGACAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MIQKWIQTLTAFLLLSFSVSCVEKKEDKNTLLAALLYLAANQIKVNSATDLVNESADDYNQNNWGLITPQTLARFVTNWP ANKPSHITGNLIILQTDDANRVAGGAASAYVAENPGQGVYVYLLDDYKPADLPSGGFRFNQTRDTGLFTNSVRYQANGQF VDDWLKTFGINLSKDLVVFAVGTGNGISGGAYPGKAVGAGAVQDITRGVYWLRYWGAEIKNLAILNGNLNKKATGAGIPL STSRSGINLERNGGFSVKQLRVDNTVLTLGLEDIYEIAKTGGNANLSGLTAKQQIIDARPATQYDGSADGLNVPRNLLVA NPASQAYITTSYQSSGAPSASAGNQTFVPFEGSIKSSKTFPWSDLLKDNADGYEYLDKAALKTLFNTTRAVYTPGATIVS QCRTNFEAQVNGFASLNILGYPTVYYDGSLVEWTALVAGHGTSSINQIPTDFKWRTDNTSVSNFLWYNNATHVVRPNVNL TATTTKKFIQEDKAYKY
Sequences:
>Translated_497_residues MIQKWIQTLTAFLLLSFSVSCVEKKEDKNTLLAALLYLAANQIKVNSATDLVNESADDYNQNNWGLITPQTLARFVTNWP ANKPSHITGNLIILQTDDANRVAGGAASAYVAENPGQGVYVYLLDDYKPADLPSGGFRFNQTRDTGLFTNSVRYQANGQF VDDWLKTFGINLSKDLVVFAVGTGNGISGGAYPGKAVGAGAVQDITRGVYWLRYWGAEIKNLAILNGNLNKKATGAGIPL STSRSGINLERNGGFSVKQLRVDNTVLTLGLEDIYEIAKTGGNANLSGLTAKQQIIDARPATQYDGSADGLNVPRNLLVA NPASQAYITTSYQSSGAPSASAGNQTFVPFEGSIKSSKTFPWSDLLKDNADGYEYLDKAALKTLFNTTRAVYTPGATIVS QCRTNFEAQVNGFASLNILGYPTVYYDGSLVEWTALVAGHGTSSINQIPTDFKWRTDNTSVSNFLWYNNATHVVRPNVNL TATTTKKFIQEDKAYKY >Mature_497_residues MIQKWIQTLTAFLLLSFSVSCVEKKEDKNTLLAALLYLAANQIKVNSATDLVNESADDYNQNNWGLITPQTLARFVTNWP ANKPSHITGNLIILQTDDANRVAGGAASAYVAENPGQGVYVYLLDDYKPADLPSGGFRFNQTRDTGLFTNSVRYQANGQF VDDWLKTFGINLSKDLVVFAVGTGNGISGGAYPGKAVGAGAVQDITRGVYWLRYWGAEIKNLAILNGNLNKKATGAGIPL STSRSGINLERNGGFSVKQLRVDNTVLTLGLEDIYEIAKTGGNANLSGLTAKQQIIDARPATQYDGSADGLNVPRNLLVA NPASQAYITTSYQSSGAPSASAGNQTFVPFEGSIKSSKTFPWSDLLKDNADGYEYLDKAALKTLFNTTRAVYTPGATIVS QCRTNFEAQVNGFASLNILGYPTVYYDGSLVEWTALVAGHGTSSINQIPTDFKWRTDNTSVSNFLWYNNATHVVRPNVNL TATTTKKFIQEDKAYKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53890; Mature: 53890
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQKWIQTLTAFLLLSFSVSCVEKKEDKNTLLAALLYLAANQIKVNSATDLVNESADDYN CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCCC QNNWGLITPQTLARFVTNWPANKPSHITGNLIILQTDDANRVAGGAASAYVAENPGQGVY CCCCEEECHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCEEEEECCCCCEEE VYLLDDYKPADLPSGGFRFNQTRDTGLFTNSVRYQANGQFVDDWLKTFGINLSKDLVVFA EEEECCCCCCCCCCCCEEECCCCCCCEEECCEEEEECCCCHHHHHHHHCCCCCCCEEEEE VGTGNGISGGAYPGKAVGAGAVQDITRGVYWLRYWGAEIKNLAILNGNLNKKATGAGIPL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHCCCCCEEEEEECCCCCCCCCCCCCC STSRSGINLERNGGFSVKQLRVDNTVLTLGLEDIYEIAKTGGNANLSGLTAKQQIIDARP CCCCCCCEEECCCCCEEEEEEECCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC ATQYDGSADGLNVPRNLLVANPASQAYITTSYQSSGAPSASAGNQTFVPFEGSIKSSKTF CCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC PWSDLLKDNADGYEYLDKAALKTLFNTTRAVYTPGATIVSQCRTNFEAQVNGFASLNILG CHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCEEEEEEEE YPTVYYDGSLVEWTALVAGHGTSSINQIPTDFKWRTDNTSVSNFLWYNNATHVVRPNVNL CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCEEECCCCEE TATTTKKFIQEDKAYKY EEHHHHHHHHHHCCCCC >Mature Secondary Structure MIQKWIQTLTAFLLLSFSVSCVEKKEDKNTLLAALLYLAANQIKVNSATDLVNESADDYN CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCHHHHHHCCCCCCC QNNWGLITPQTLARFVTNWPANKPSHITGNLIILQTDDANRVAGGAASAYVAENPGQGVY CCCCEEECHHHHHHHHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCEEEEECCCCCEEE VYLLDDYKPADLPSGGFRFNQTRDTGLFTNSVRYQANGQFVDDWLKTFGINLSKDLVVFA EEEECCCCCCCCCCCCEEECCCCCCCEEECCEEEEECCCCHHHHHHHHCCCCCCCEEEEE VGTGNGISGGAYPGKAVGAGAVQDITRGVYWLRYWGAEIKNLAILNGNLNKKATGAGIPL EECCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHCCCCCEEEEEECCCCCCCCCCCCCC STSRSGINLERNGGFSVKQLRVDNTVLTLGLEDIYEIAKTGGNANLSGLTAKQQIIDARP CCCCCCCEEECCCCCEEEEEEECCEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHCCCC ATQYDGSADGLNVPRNLLVANPASQAYITTSYQSSGAPSASAGNQTFVPFEGSIKSSKTF CCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCC PWSDLLKDNADGYEYLDKAALKTLFNTTRAVYTPGATIVSQCRTNFEAQVNGFASLNILG CHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHCCCEEEECCEEEEEEEE YPTVYYDGSLVEWTALVAGHGTSSINQIPTDFKWRTDNTSVSNFLWYNNATHVVRPNVNL CCEEEECCCEEEEEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCEEECCCCEE TATTTKKFIQEDKAYKY EEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA