| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221887
Identifier: 183221887
GI number: 183221887
Start: 2608153
End: 2608617
Strand: Direct
Name: 183221887
Synonym: LEPBI_I2523
Alternate gene names: NA
Gene position: 2608153-2608617 (Clockwise)
Preceding gene: 183221886
Following gene: 183221888
Centisome position: 72.46
GC content: 36.56
Gene sequence:
>465_bases ATGAAAAAAACCATTCCATTCCAAAAAGAAATCCTTCTCGTTACGGTAACAACCCTTCTATGGACCGTAGTATATCTCCT TTTCCTACGTCCAATCTCCCAAAATGATTCCCGTTCTCGAACACCAAACCAAGTAGATGCACGAGGTCTCACTTCTTATC ATAAACGAGAAGTGAATCTAACCATCACCAAACACAAAAATAAGATTCAAAATTGTTATCTTGAATATTTAAAAACTAAA CCCTCACTAGAGGAAGGCAAAATTCAGTTTGATTGGCAGATAGAACCAGACGGAGATCCAACCAAAATAGAACTCATTCA TTCTGATTTCTCCTCAAACATTCTAACCGAATGCATTCAAAATGAAATTGGTTCCTGGGAATTTCCACCACCAACCGAAA GATCACATAACACGTATGTAGATTATACCTTTCATTTCAAAAAAGAAGTAACGGTTTCCAATTAG
Upstream 100 bases:
>100_bases AGAGGATAGCAATCAAACTACAATTACGAATGGGCCAACAGCAAGTTCGGATAACTCTTCTGTATCTTCCGGTGCCGCCT CTGTCTTTATTAGAAAATAA
Downstream 100 bases:
>100_bases AAAATATAGTTATCTTTATCTCCCGGTCGGCCCATCAAATCAATCGCAGGGCACGGTCCTCTAACTAAATTTTGTGAATT TGGGCGTTCCCAATTTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKKTIPFQKEILLVTVTTLLWTVVYLLFLRPISQNDSRSRTPNQVDARGLTSYHKREVNLTITKHKNKIQNCYLEYLKTK PSLEEGKIQFDWQIEPDGDPTKIELIHSDFSSNILTECIQNEIGSWEFPPPTERSHNTYVDYTFHFKKEVTVSN
Sequences:
>Translated_154_residues MKKTIPFQKEILLVTVTTLLWTVVYLLFLRPISQNDSRSRTPNQVDARGLTSYHKREVNLTITKHKNKIQNCYLEYLKTK PSLEEGKIQFDWQIEPDGDPTKIELIHSDFSSNILTECIQNEIGSWEFPPPTERSHNTYVDYTFHFKKEVTVSN >Mature_154_residues MKKTIPFQKEILLVTVTTLLWTVVYLLFLRPISQNDSRSRTPNQVDARGLTSYHKREVNLTITKHKNKIQNCYLEYLKTK PSLEEGKIQFDWQIEPDGDPTKIELIHSDFSSNILTECIQNEIGSWEFPPPTERSHNTYVDYTFHFKKEVTVSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18075; Mature: 18075
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIPFQKEILLVTVTTLLWTVVYLLFLRPISQNDSRSRTPNQVDARGLTSYHKREVNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE TITKHKNKIQNCYLEYLKTKPSLEEGKIQFDWQIEPDGDPTKIELIHSDFSSNILTECIQ EEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH NEIGSWEFPPPTERSHNTYVDYTFHFKKEVTVSN HHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC >Mature Secondary Structure MKKTIPFQKEILLVTVTTLLWTVVYLLFLRPISQNDSRSRTPNQVDARGLTSYHKREVNL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEE TITKHKNKIQNCYLEYLKTKPSLEEGKIQFDWQIEPDGDPTKIELIHSDFSSNILTECIQ EEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHHHH NEIGSWEFPPPTERSHNTYVDYTFHFKKEVTVSN HHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA