| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221876
Identifier: 183221876
GI number: 183221876
Start: 2594985
End: 2595413
Strand: Direct
Name: 183221876
Synonym: LEPBI_I2511
Alternate gene names: NA
Gene position: 2594985-2595413 (Clockwise)
Preceding gene: 183221875
Following gene: 183221877
Centisome position: 72.09
GC content: 37.06
Gene sequence:
>429_bases ATGTCAAAAATTCAAATGTTTAAACCAATTGTACTAGTTATCCTTCTTACTCTTTCTTTTTTCGTAAGTTGCAAAAACGA AAAGAGTTCTGACAAAGAAGGTGTACTACAGTATTATGCTTTGTTACTAGGATCAAGTGCACCACTTGCGGAAATTACTG ATGCAGATTGTACAGACCCTGCGCCAACATTCGCATCACTTGGTCAAGCGGGAACAACAGCTACTTGTTCCAATTGTCAT AACGCAGGTAATGCAAATGCAGGTTTTGACATCACTTCTTACAATAGCACTAGAAATAGGATTACGGTTGGAAACCCAAA GGGGAGTTTATTATTTAATAAAATCAATTCAGGATCCATGCGAATTTATAATACGAATGCAATCAATAAAGCAATCTATT GTTGGACACTAAAAGGTGGGAACCCCTGA
Upstream 100 bases:
>100_bases CAGAAAGTTTTTCCAAAATTGCATTTTGGAAAATTAGAAAATTAGCTCCAATGCATCGACTTCGATGTATTGGGTATAGA AAAAAAATAAAGGTAGTTTT
Downstream 100 bases:
>100_bases ATCTCTTTCATAAGAAGATTTTTTTTCTTCTTTTTTGGATATTAACAACCAATTTATTTGCAGACACAAAAACCAAATCA CTGGTGGTGAAAGTTGCTAA
Product: putative signal peptide
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSKIQMFKPIVLVILLTLSFFVSCKNEKSSDKEGVLQYYALLLGSSAPLAEITDADCTDPAPTFASLGQAGTTATCSNCH NAGNANAGFDITSYNSTRNRITVGNPKGSLLFNKINSGSMRIYNTNAINKAIYCWTLKGGNP
Sequences:
>Translated_142_residues MSKIQMFKPIVLVILLTLSFFVSCKNEKSSDKEGVLQYYALLLGSSAPLAEITDADCTDPAPTFASLGQAGTTATCSNCH NAGNANAGFDITSYNSTRNRITVGNPKGSLLFNKINSGSMRIYNTNAINKAIYCWTLKGGNP >Mature_141_residues SKIQMFKPIVLVILLTLSFFVSCKNEKSSDKEGVLQYYALLLGSSAPLAEITDADCTDPAPTFASLGQAGTTATCSNCHN AGNANAGFDITSYNSTRNRITVGNPKGSLLFNKINSGSMRIYNTNAINKAIYCWTLKGGNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15181; Mature: 15050
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIQMFKPIVLVILLTLSFFVSCKNEKSSDKEGVLQYYALLLGSSAPLAEITDADCTDP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APTFASLGQAGTTATCSNCHNAGNANAGFDITSYNSTRNRITVGNPKGSLLFNKINSGSM CCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCEE RIYNTNAINKAIYCWTLKGGNP EEEECCCCCCEEEEEEECCCCC >Mature Secondary Structure SKIQMFKPIVLVILLTLSFFVSCKNEKSSDKEGVLQYYALLLGSSAPLAEITDADCTDP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC APTFASLGQAGTTATCSNCHNAGNANAGFDITSYNSTRNRITVGNPKGSLLFNKINSGSM CCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCEEEEEECCCEE RIYNTNAINKAIYCWTLKGGNP EEEECCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA